RNA–Protein interactions for RNA: ENST00000421324.4

AC012560.1-202, humanhuman

TSL 1 (best) BASIC

Gene AC012560.1, Length 535 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012560.1-202ENST00000421324 CADPSQ9ULU8 1353 aa13.74□□□□□ -0.21
AC012560.1-202ENST00000421324 LAMC3Q9Y6N6 1575 aa13.74□□□□□ -0.21
AC012560.1-202ENST00000421324 TOP2AP11388 1531 aaKnown RBP13.73□□□□□ -0.21
AC012560.1-202ENST00000421324 PRR29P0C7W0 189 aa13.72□□□□□ -0.21
AC012560.1-202ENST00000421324 PDS5BQ9NTI5 1447 aa13.72□□□□□ -0.21
AC012560.1-202ENST00000421324 STAG3Q9UJ98 1225 aa13.71□□□□□ -0.21
AC012560.1-202ENST00000421324 CUX2O14529 1486 aa13.66□□□□□ -0.22
AC012560.1-202ENST00000421324 PRKAR2AP13861 404 aaKnown RBP13.65□□□□□ -0.22
AC012560.1-202ENST00000421324 CCDC88BA6NC98 1476 aa13.61□□□□□ -0.23
AC012560.1-202ENST00000421324 CFTRP13569 1480 aa13.61□□□□□ -0.23
AC012560.1-202ENST00000421324 CHADLQ6NUI6 762 aa13.6□□□□□ -0.23
AC012560.1-202ENST00000421324 SUPT5HO00267 1087 aaKnown RBP13.58□□□□□ -0.24
AC012560.1-202ENST00000421324 KIF21AQ7Z4S6 1674 aa13.56□□□□□ -0.24
AC012560.1-202ENST00000421324 FANCD2Q9BXW9 1451 aa13.55□□□□□ -0.24
AC012560.1-202ENST00000421324 CEP164Q9UPV0 1460 aa13.55□□□□□ -0.24
AC012560.1-202ENST00000421324 CREBZFQ9NS37 354 aa13.54□□□□□ -0.24
AC012560.1-202ENST00000421324 MRC2Q9UBG0 1479 aa13.54□□□□□ -0.24
AC012560.1-202ENST00000421324 THOC2Q8NI27 1593 aaKnown RBP13.54□□□□□ -0.24
AC012560.1-202ENST00000421324 FARP1Q9Y4F1 1045 aaPredicted RBP13.46□□□□□ -0.25
AC012560.1-202ENST00000421324 WDR62O43379 1518 aa13.45□□□□□ -0.26
AC012560.1-202ENST00000421324 HAX1O00165 279 aa13.43□□□□□ -0.26
AC012560.1-202ENST00000421324 DNAJC5Q9H3Z4 198 aa13.41□□□□□ -0.26
AC012560.1-202ENST00000421324 C19orf67A6NJJ6 358 aa13.4□□□□□ -0.26
AC012560.1-202ENST00000421324 MNX1P50219 401 aaPredicted RBP13.4□□□□□ -0.26
AC012560.1-202ENST00000421324 URB2Q14146 1524 aaKnown RBP13.39□□□□□ -0.27
AC012560.1-202ENST00000421324 PRDM2Q13029 1718 aa13.39□□□□□ -0.27
AC012560.1-202ENST00000421324 EVX2Q03828 476 aa13.39□□□□□ -0.27
AC012560.1-202ENST00000421324 ABCC8Q09428 1581 aa13.36□□□□□ -0.27
AC012560.1-202ENST00000421324 FBXO3Q9UK99 471 aa13.32□□□□□ -0.28
AC012560.1-202ENST00000421324 TOPBP1Q92547 1522 aa13.32□□□□□ -0.28
AC012560.1-202ENST00000421324 MIER1Q8N108 512 aa13.3□□□□□ -0.28
AC012560.1-202ENST00000421324 SP7Q8TDD2 431 aaPredicted RBP13.29□□□□□ -0.28
AC012560.1-202ENST00000421324 DNMBPQ6XZF7 1577 aa13.28□□□□□ -0.28
AC012560.1-202ENST00000421324 IFT140Q96RY7 1462 aa13.27□□□□□ -0.29
AC012560.1-202ENST00000421324 NPM1P06748 294 aaKnown RBP eCLIP13.24□□□□□ -0.29
AC012560.1-202ENST00000421324 CD44P16070 742 aaKnown RBP13.24□□□□□ -0.29
AC012560.1-202ENST00000421324 PLCD3Q8N3E9 789 aa13.23□□□□□ -0.29
AC012560.1-202ENST00000421324 SOGA1O94964 1423 aa13.21□□□□□ -0.3
AC012560.1-202ENST00000421324 PLEKHG5O94827 1062 aa13.2□□□□□ -0.3
AC012560.1-202ENST00000421324 POLA1P09884 1462 aaPredicted RBP13.2□□□□□ -0.3
AC012560.1-202ENST00000421324 ZNF608Q9ULD9 1512 aaPredicted RBP13.19□□□□□ -0.3
AC012560.1-202ENST00000421324 VASPP50552 380 aaPredicted RBP13.19□□□□□ -0.3
AC012560.1-202ENST00000421324 CUX1P39880 1505 aa13.17□□□□□ -0.3
AC012560.1-202ENST00000421324 FGD5Q6ZNL6 1462 aa13.16□□□□□ -0.3
AC012560.1-202ENST00000421324 RAD54L2Q9Y4B4 1467 aa13.16□□□□□ -0.3
AC012560.1-202ENST00000421324 AQRO60306 1485 aaKnown RBP eCLIP13.15□□□□□ -0.3
AC012560.1-202ENST00000421324 TDRD9Q8NDG6 1382 aaKnown RBP13.14□□□□□ -0.31
AC012560.1-202ENST00000421324 TARBP1Q13395 1621 aaKnown RBP13.13□□□□□ -0.31
AC012560.1-202ENST00000421324 ZBTB47Q9UFB7 747 aaPredicted RBP13.11□□□□□ -0.31
AC012560.1-202ENST00000421324 ZRANB1Q9UGI0 708 aa13.11□□□□□ -0.31
AC012560.1-202ENST00000421324 WRNQ14191 1432 aaPredicted RBP eCLIP13.11□□□□□ -0.31
AC012560.1-202ENST00000421324 ZNF579Q8NAF0 562 aaKnown RBP13.1□□□□□ -0.31
AC012560.1-202ENST00000421324 EIF4G3O43432 1585 aaKnown RBP13.1□□□□□ -0.31
AC012560.1-202ENST00000421324 GABBR2O75899 941 aa13.08□□□□□ -0.32
AC012560.1-202ENST00000421324 NUBP1P53384 320 aa13.07□□□□□ -0.32
AC012560.1-202ENST00000421324 RASEFQ8IZ41 740 aa13.07□□□□□ -0.32
AC012560.1-202ENST00000421324 PAK3O75914 559 aaPredicted RBP13.05□□□□□ -0.32
AC012560.1-202ENST00000421324 WDR97A6NE52 1622 aa13.04□□□□□ -0.32
AC012560.1-202ENST00000421324 CHMP7Q8WUX9 453 aaPredicted RBP13.04□□□□□ -0.32
AC012560.1-202ENST00000421324 TOP2BQ02880 1626 aa13.03□□□□□ -0.32
AC012560.1-202ENST00000421324 GRIN2BQ13224 1484 aa13.03□□□□□ -0.32
AC012560.1-202ENST00000421324 ABCA10Q8WWZ4 1543 aa13.03□□□□□ -0.32
AC012560.1-202ENST00000421324 IFNLR1Q8IU57 520 aaPredicted RBP13.02□□□□□ -0.33
AC012560.1-202ENST00000421324 GAPVD1Q14C86 1478 aa13.02□□□□□ -0.33
AC012560.1-202ENST00000421324 CLCN6P51797 869 aa13.01□□□□□ -0.33
AC012560.1-202ENST00000421324 TSPYL2Q9H2G4 693 aaPredicted RBP13.01□□□□□ -0.33
AC012560.1-202ENST00000421324 SYNJ1O43426 1573 aa13.01□□□□□ -0.33
AC012560.1-202ENST00000421324 BIVM-ERCC5R4GMW8 1640 aa13□□□□□ -0.33
AC012560.1-202ENST00000421324 PHF12Q96QT6 1004 aa13□□□□□ -0.33
AC012560.1-202ENST00000421324 CCDC61Q9Y6R9 512 aa13□□□□□ -0.33
AC012560.1-202ENST00000421324 SNAPC4Q5SXM2 1469 aa12.99□□□□□ -0.33
AC012560.1-202ENST00000421324 MAGI1Q96QZ7 1491 aaPredicted RBP12.98□□□□□ -0.33
AC012560.1-202ENST00000421324 KLHL34Q8N239 644 aa12.96□□□□□ -0.33
AC012560.1-202ENST00000421324 TRIM41Q8WV44 630 aa12.95□□□□□ -0.34
AC012560.1-202ENST00000421324 SYNJ2O15056 1496 aa12.94□□□□□ -0.34
AC012560.1-202ENST00000421324 CHD1O14646 1710 aa12.93□□□□□ -0.34
AC012560.1-202ENST00000421324 ABCA5Q8WWZ7 1642 aa12.93□□□□□ -0.34
AC012560.1-202ENST00000421324 PBRM1Q86U86 1689 aa12.9□□□□□ -0.34
AC012560.1-202ENST00000421324 GALR2O43603 387 aaPredicted RBP12.9□□□□□ -0.34
AC012560.1-202ENST00000421324 FAM212AQ96EL1 285 aa12.89□□□□□ -0.35
AC012560.1-202ENST00000421324 KIF12Q96FN5 646 aa12.89□□□□□ -0.35
AC012560.1-202ENST00000421324 FHAD1B1AJZ9 1412 aa12.88□□□□□ -0.35
AC012560.1-202ENST00000421324 ERICH3Q5RHP9 1530 aa12.87□□□□□ -0.35
AC012560.1-202ENST00000421324 SPOCK2Q92563 424 aa12.86□□□□□ -0.35
AC012560.1-202ENST00000421324 ARHGEF11O15085 1522 aa12.86□□□□□ -0.35
AC012560.1-202ENST00000421324 KIF27Q86VH2 1401 aa12.86□□□□□ -0.35
AC012560.1-202ENST00000421324 POTEIP0CG38 1075 aa12.85□□□□□ -0.35
AC012560.1-202ENST00000421324 CYB5RLQ6IPT4 315 aa12.85□□□□□ -0.35
AC012560.1-202ENST00000421324 RIMBP3CA6NJZ7 1639 aa12.84□□□□□ -0.35
AC012560.1-202ENST00000421324 RIMBP3BA6NNM3 1639 aa12.84□□□□□ -0.35
AC012560.1-202ENST00000421324 RIMBP3Q9UFD9 1639 aa12.84□□□□□ -0.35
AC012560.1-202ENST00000421324 MS4A3Q96HJ5 214 aa12.84□□□□□ -0.35
AC012560.1-202ENST00000421324 GRIN2AQ12879 1464 aa12.84□□□□□ -0.35
AC012560.1-202ENST00000421324 DCAF8Q5TAQ9 597 aa12.83□□□□□ -0.36
AC012560.1-202ENST00000421324 IGF1RP08069 1367 aa12.82□□□□□ -0.36
AC012560.1-202ENST00000421324 MAP3K13O43283 966 aa12.82□□□□□ -0.36
AC012560.1-202ENST00000421324 ADAMTS12P58397 1594 aa12.81□□□□□ -0.36
AC012560.1-202ENST00000421324 CLASP1Q7Z460 1538 aa12.81□□□□□ -0.36
AC012560.1-202ENST00000421324 GSE1Q14687 1217 aa12.78□□□□□ -0.36
AC012560.1-202ENST00000421324 NUP160Q12769 1436 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms