RNA–Protein interactions for RNA: ENST00000420709.5

PRAME-207, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 2

Gene PRAME, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-207ENST00000420709 IGF1RP08069 1367 aa22.5■■□□□ 1.19
PRAME-207ENST00000420709 CUL7Q14999 1698 aa22.46■■□□□ 1.19
PRAME-207ENST00000420709 KIAA0586Q9BVV6 1533 aa22.41■■□□□ 1.18
PRAME-207ENST00000420709 KIF13AQ9H1H9 1805 aa22.41■■□□□ 1.18
PRAME-207ENST00000420709 ADCY10Q96PN6 1610 aa22.36■■□□□ 1.17
PRAME-207ENST00000420709 CARMIL1Q5VZK9 1371 aa22.36■■□□□ 1.17
PRAME-207ENST00000420709 NPM1P06748 294 aaKnown RBP eCLIP22.32■■□□□ 1.16
PRAME-207ENST00000420709 AEBP2Q6ZN18 517 aaPredicted RBP22.3■■□□□ 1.16
PRAME-207ENST00000420709 TTBK1Q5TCY1 1321 aaPredicted RBP22.3■■□□□ 1.16
PRAME-207ENST00000420709 FAM69CQ0P6D2 419 aa22.29■■□□□ 1.16
PRAME-207ENST00000420709 MAPKBP1O60336 1514 aa22.29■■□□□ 1.16
PRAME-207ENST00000420709 ABCC10Q5T3U5 1492 aa22.28■■□□□ 1.16
PRAME-207ENST00000420709 DIP2BQ9P265 1576 aa22.25■■□□□ 1.15
PRAME-207ENST00000420709 IQGAP2Q13576 1575 aa22.23■■□□□ 1.15
PRAME-207ENST00000420709 PTPRGP23470 1445 aa22.23■■□□□ 1.15
PRAME-207ENST00000420709 CARMIL2Q6F5E8 1435 aa22.2■■□□□ 1.14
PRAME-207ENST00000420709 TNIKQ9UKE5 1360 aa22.19■■□□□ 1.14
PRAME-207ENST00000420709 RAPGEF2Q9Y4G8 1499 aa22.15■■□□□ 1.14
PRAME-207ENST00000420709 TSPOAP1O95153 1857 aa22.15■■□□□ 1.14
PRAME-207ENST00000420709 DISP1Q96F81 1524 aa22.13■■□□□ 1.13
PRAME-207ENST00000420709 ABCC2Q92887 1545 aa22.11■■□□□ 1.13
PRAME-207ENST00000420709 UGGT2Q9NYU1 1516 aa22.07■■□□□ 1.12
PRAME-207ENST00000420709 KDM6BO15054 1643 aa22.07■■□□□ 1.12
PRAME-207ENST00000420709 UACAQ9BZF9 1416 aa22.06■■□□□ 1.12
PRAME-207ENST00000420709 ASXL2Q76L83 1435 aa22.06■■□□□ 1.12
PRAME-207ENST00000420709 UHRF1BP1LA0JNW5 1464 aa22.05■■□□□ 1.12
PRAME-207ENST00000420709 KIAA0556O60303 1618 aa22.05■■□□□ 1.12
PRAME-207ENST00000420709 PLB1Q6P1J6 1458 aa22.01■■□□□ 1.11
PRAME-207ENST00000420709 CTTNBP2Q8WZ74 1663 aa22.01■■□□□ 1.11
PRAME-207ENST00000420709 ZCCHC11Q5TAX3 1644 aaKnown RBP21.97■■□□□ 1.11
PRAME-207ENST00000420709 PPRC1Q5VV67 1664 aaKnown RBP21.97■■□□□ 1.11
PRAME-207ENST00000420709 KDM5BQ9UGL1 1544 aa21.96■■□□□ 1.11
PRAME-207ENST00000420709 GLI2P10070 1586 aa21.96■■□□□ 1.11
PRAME-207ENST00000420709 EPRSP07814 1512 aaKnown RBP21.92■■□□□ 1.1
PRAME-207ENST00000420709 PRXQ9BXM0 1461 aa21.91■■□□□ 1.1
PRAME-207ENST00000420709 MAP3K4Q9Y6R4 1608 aa21.88■■□□□ 1.09
PRAME-207ENST00000420709 GOLGA3Q08378 1498 aa21.87■■□□□ 1.09
PRAME-207ENST00000420709 KDM4FA0A1W2PPD8 638 aa21.86■■□□□ 1.09
PRAME-207ENST00000420709 WDR7Q9Y4E6 1490 aa21.83■■□□□ 1.09
PRAME-207ENST00000420709 ABCA8O94911 1581 aa21.83■■□□□ 1.09
PRAME-207ENST00000420709 COL17A1Q9UMD9 1497 aaPredicted RBP21.81■■□□□ 1.08
PRAME-207ENST00000420709 TEX14Q8IWB6 1497 aa21.78■■□□□ 1.08
PRAME-207ENST00000420709 P3H3Q8IVL6 736 aa21.78■■□□□ 1.08
PRAME-207ENST00000420709 KCNH8Q96L42 1107 aa21.76■■□□□ 1.07
PRAME-207ENST00000420709 ARID3CA6NKF2 412 aa21.75■■□□□ 1.07
PRAME-207ENST00000420709 CSRNP3Q8WYN3 585 aa21.74■■□□□ 1.07
PRAME-207ENST00000420709 CFAP43Q8NDM7 1665 aa21.7■■□□□ 1.06
PRAME-207ENST00000420709 CD109Q6YHK3 1445 aa21.7■■□□□ 1.06
PRAME-207ENST00000420709 ADGRL1O94910 1474 aa21.69■■□□□ 1.06
PRAME-207ENST00000420709 SAMD9Q5K651 1589 aa21.67■■□□□ 1.06
PRAME-207ENST00000420709 MAGI3Q5TCQ9 1506 aa21.66■■□□□ 1.06
PRAME-207ENST00000420709 ATP10BO94823 1461 aa21.65■■□□□ 1.06
PRAME-207ENST00000420709 RANGAP1P46060 587 aaPredicted RBP21.65■■□□□ 1.06
PRAME-207ENST00000420709 FAM9AQ8IZU1 332 aaPredicted RBP21.64■■□□□ 1.05
PRAME-207ENST00000420709 RAPGEF6Q8TEU7 1601 aa21.61■■□□□ 1.05
PRAME-207ENST00000420709 EEA1Q15075 1411 aa21.61■■□□□ 1.05
PRAME-207ENST00000420709 FHOD3Q2V2M9 1422 aa21.56■■□□□ 1.04
PRAME-207ENST00000420709 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.55■■□□□ 1.04
PRAME-207ENST00000420709 HNRNPUL2Q1KMD3 747 aaKnown RBP21.55■■□□□ 1.04
PRAME-207ENST00000420709 ABCA9Q8IUA7 1624 aa21.53■■□□□ 1.04
PRAME-207ENST00000420709 NUP153P49790 1475 aaKnown RBP21.52■■□□□ 1.04
PRAME-207ENST00000420709 KIF21BO75037 1637 aa21.49■■□□□ 1.03
PRAME-207ENST00000420709 ARAP3Q8WWN8 1544 aa21.49■■□□□ 1.03
PRAME-207ENST00000420709 EHMT2Q96KQ7 1210 aa21.48■■□□□ 1.03
PRAME-207ENST00000420709 EFCAB5A4FU69 1503 aa21.43■■□□□ 1.02
PRAME-207ENST00000420709 RAPGEF3O95398 923 aa21.41■■□□□ 1.02
PRAME-207ENST00000420709 HECW2Q9P2P5 1572 aa21.4■■□□□ 1.02
PRAME-207ENST00000420709 NEO1Q92859 1461 aa21.39■■□□□ 1.02
PRAME-207ENST00000420709 PHLDB1Q86UU1 1377 aa21.39■■□□□ 1.02
PRAME-207ENST00000420709 FRMPD1Q5SYB0 1578 aa21.38■■□□□ 1.01
PRAME-207ENST00000420709 PLEKHD1A6NEE1 506 aa21.37■■□□□ 1.01
PRAME-207ENST00000420709 CDK13Q14004 1512 aaKnown RBP21.35■■□□□ 1.01
PRAME-207ENST00000420709 UBTFP17480 764 aaKnown RBP21.35■■□□□ 1.01
PRAME-207ENST00000420709 CHIC1Q5VXU3 224 aa21.35■■□□□ 1.01
PRAME-207ENST00000420709 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.34■■□□□ 1.017e-13■□□□□ 11.3
PRAME-207ENST00000420709 TTC37Q6PGP7 1564 aa21.33■■□□□ 1.01
PRAME-207ENST00000420709 FANCAO15360 1455 aa21.29■■□□□ 1
PRAME-207ENST00000420709 ATP1B4Q9UN42 357 aaPredicted RBP21.29■■□□□ 1
PRAME-207ENST00000420709 AKNAQ7Z591 1439 aa21.29■■□□□ 1
PRAME-207ENST00000420709 ADAMTSL3P82987 1691 aa21.28■■□□□ 1
PRAME-207ENST00000420709 DENND4BO75064 1496 aaPredicted RBP21.27■■□□□ 1
PRAME-207ENST00000420709 ARHGAP35Q9NRY4 1499 aa21.27■■□□□ 1
PRAME-207ENST00000420709 RICTORQ6R327 1708 aa21.27■■□□□ 1
PRAME-207ENST00000420709 CFAP74Q9C0B2 1584 aa21.27■□□□□ 0.99
PRAME-207ENST00000420709 ARID4BQ4LE39 1312 aaPredicted RBP21.25■□□□□ 0.99
PRAME-207ENST00000420709 ARHGEF40Q8TER5 1519 aa21.24■□□□□ 0.99
PRAME-207ENST00000420709 BCORL1Q5H9F3 1711 aa21.24■□□□□ 0.99
PRAME-207ENST00000420709 HECW1Q76N89 1606 aa21.24■□□□□ 0.99
PRAME-207ENST00000420709 FMN1Q68DA7 1419 aa21.23■□□□□ 0.99
PRAME-207ENST00000420709 PTPRMP28827 1452 aa21.23■□□□□ 0.99
PRAME-207ENST00000420709 ILDR1Q86SU0 546 aaPredicted RBP21.22■□□□□ 0.99
PRAME-207ENST00000420709 MADDQ8WXG6 1647 aa21.22■□□□□ 0.99
PRAME-207ENST00000420709 PLCH2O75038 1416 aa21.17■□□□□ 0.98
PRAME-207ENST00000420709 YEATS2Q9ULM3 1422 aa21.17■□□□□ 0.98
PRAME-207ENST00000420709 ZMYM4Q5VZL5 1548 aa21.17■□□□□ 0.98
PRAME-207ENST00000420709 KIF14Q15058 1648 aa21.16■□□□□ 0.98
PRAME-207ENST00000420709 ZFYVE16Q7Z3T8 1539 aa21.15■□□□□ 0.98
PRAME-207ENST00000420709 LRRIQ1Q96JM4 1722 aa21.15■□□□□ 0.98
PRAME-207ENST00000420709 SIGLEC1Q9BZZ2 1709 aa21.15■□□□□ 0.98
PRAME-207ENST00000420709 RIMS1Q86UR5 1692 aaKnown RBP21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms