RNA–Protein interactions for RNA: ENST00000420417.3

AC016877.1-201, humanhuman

TSL 3 BASIC

Gene AC016877.1, Length 464 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC016877.1-201ENST00000420417 PDS5BQ9NTI5 1447 aa14.15□□□□□ -0.14
AC016877.1-201ENST00000420417 SSUH2Q9Y2M2 353 aa14.13□□□□□ -0.15
AC016877.1-201ENST00000420417 PROM2Q8N271 834 aa14.1□□□□□ -0.15
AC016877.1-201ENST00000420417 MRC2Q9UBG0 1479 aa14.05□□□□□ -0.16
AC016877.1-201ENST00000420417 WDR62O43379 1518 aa14.04□□□□□ -0.16
AC016877.1-201ENST00000420417 FANCD2Q9BXW9 1451 aa14.02□□□□□ -0.16
AC016877.1-201ENST00000420417 CEP164Q9UPV0 1460 aa14□□□□□ -0.17
AC016877.1-201ENST00000420417 AKT1S1Q96B36 256 aa14□□□□□ -0.17
AC016877.1-201ENST00000420417 FBXO3Q9UK99 471 aa13.96□□□□□ -0.17
AC016877.1-201ENST00000420417 URB2Q14146 1524 aaKnown RBP13.91□□□□□ -0.18
AC016877.1-201ENST00000420417 ABCC8Q09428 1581 aa13.9□□□□□ -0.18
AC016877.1-201ENST00000420417 DNMBPQ6XZF7 1577 aa13.88□□□□□ -0.19
AC016877.1-201ENST00000420417 REM2Q8IYK8 340 aaPredicted RBP13.85□□□□□ -0.19
AC016877.1-201ENST00000420417 STAG3Q9UJ98 1225 aa13.85□□□□□ -0.19
AC016877.1-201ENST00000420417 TOPBP1Q92547 1522 aa13.84□□□□□ -0.19
AC016877.1-201ENST00000420417 SPDYE1Q8NFV5 336 aaPredicted RBP13.82□□□□□ -0.2
AC016877.1-201ENST00000420417 BIVM-ERCC5R4GMW8 1640 aa13.81□□□□□ -0.2
AC016877.1-201ENST00000420417 CUX1P39880 1505 aa13.8□□□□□ -0.2
AC016877.1-201ENST00000420417 TOP2BQ02880 1626 aa13.79□□□□□ -0.2
AC016877.1-201ENST00000420417 WRNQ14191 1432 aaPredicted RBP eCLIP13.79□□□□□ -0.2
AC016877.1-201ENST00000420417 SYNJ1O43426 1573 aa13.75□□□□□ -0.21
AC016877.1-201ENST00000420417 POLA1P09884 1462 aaPredicted RBP13.74□□□□□ -0.21
AC016877.1-201ENST00000420417 ZNF608Q9ULD9 1512 aaPredicted RBP13.73□□□□□ -0.21
AC016877.1-201ENST00000420417 IFT140Q96RY7 1462 aa13.73□□□□□ -0.21
AC016877.1-201ENST00000420417 WDR97A6NE52 1622 aa13.72□□□□□ -0.21
AC016877.1-201ENST00000420417 VASPP50552 380 aaPredicted RBP13.71□□□□□ -0.21
AC016877.1-201ENST00000420417 CLEC11AQ9Y240 323 aa13.71□□□□□ -0.21
AC016877.1-201ENST00000420417 FGD5Q6ZNL6 1462 aa13.71□□□□□ -0.21
AC016877.1-201ENST00000420417 TARBP1Q13395 1621 aaKnown RBP13.71□□□□□ -0.22
AC016877.1-201ENST00000420417 PITPNM1O00562 1244 aa13.66□□□□□ -0.22
AC016877.1-201ENST00000420417 EIF4G3O43432 1585 aaKnown RBP13.65□□□□□ -0.22
AC016877.1-201ENST00000420417 ABCA10Q8WWZ4 1543 aa13.64□□□□□ -0.23
AC016877.1-201ENST00000420417 PRR29P0C7W0 189 aa13.63□□□□□ -0.23
AC016877.1-201ENST00000420417 SOGA1O94964 1423 aa13.63□□□□□ -0.23
AC016877.1-201ENST00000420417 AQRO60306 1485 aaKnown RBP eCLIP13.6□□□□□ -0.23
AC016877.1-201ENST00000420417 RAD54L2Q9Y4B4 1467 aa13.6□□□□□ -0.23
AC016877.1-201ENST00000420417 MIER1Q8N108 512 aa13.59□□□□□ -0.23
AC016877.1-201ENST00000420417 ABCA5Q8WWZ7 1642 aa13.59□□□□□ -0.23
AC016877.1-201ENST00000420417 PLCD3Q8N3E9 789 aa13.58□□□□□ -0.24
AC016877.1-201ENST00000420417 TRIM41Q8WV44 630 aa13.58□□□□□ -0.24
AC016877.1-201ENST00000420417 PLEKHG5O94827 1062 aa13.55□□□□□ -0.24
AC016877.1-201ENST00000420417 IFNLR1Q8IU57 520 aaPredicted RBP13.52□□□□□ -0.25
AC016877.1-201ENST00000420417 RIMBP3CA6NJZ7 1639 aa13.52□□□□□ -0.25
AC016877.1-201ENST00000420417 RIMBP3BA6NNM3 1639 aa13.52□□□□□ -0.25
AC016877.1-201ENST00000420417 RIMBP3Q9UFD9 1639 aa13.52□□□□□ -0.25
AC016877.1-201ENST00000420417 PBRM1Q86U86 1689 aa13.52□□□□□ -0.25
AC016877.1-201ENST00000420417 CHD1O14646 1710 aa13.52□□□□□ -0.25
AC016877.1-201ENST00000420417 GAPVD1Q14C86 1478 aa13.51□□□□□ -0.25
AC016877.1-201ENST00000420417 TDRD9Q8NDG6 1382 aaKnown RBP13.51□□□□□ -0.25
AC016877.1-201ENST00000420417 ERICH3Q5RHP9 1530 aa13.5□□□□□ -0.25
AC016877.1-201ENST00000420417 GRIN2BQ13224 1484 aa13.5□□□□□ -0.25
AC016877.1-201ENST00000420417 CHRDL2Q6WN34 429 aa13.49□□□□□ -0.25
AC016877.1-201ENST00000420417 MAGI1Q96QZ7 1491 aaPredicted RBP13.48□□□□□ -0.25
AC016877.1-201ENST00000420417 KIF27Q86VH2 1401 aa13.48□□□□□ -0.25
AC016877.1-201ENST00000420417 ARHGEF11O15085 1522 aa13.48□□□□□ -0.25
AC016877.1-201ENST00000420417 KLHL34Q8N239 644 aa13.47□□□□□ -0.25
AC016877.1-201ENST00000420417 ZBTB47Q9UFB7 747 aaPredicted RBP13.46□□□□□ -0.25
AC016877.1-201ENST00000420417 SNAPC4Q5SXM2 1469 aa13.45□□□□□ -0.26
AC016877.1-201ENST00000420417 CREBZFQ9NS37 354 aa13.45□□□□□ -0.26
AC016877.1-201ENST00000420417 CUL7Q14999 1698 aa13.44□□□□□ -0.26
AC016877.1-201ENST00000420417 ADAMTS12P58397 1594 aa13.43□□□□□ -0.26
AC016877.1-201ENST00000420417 EEA1Q15075 1411 aa13.43□□□□□ -0.26
AC016877.1-201ENST00000420417 FXR2P51116 673 aaKnown RBP eCLIP13.41□□□□□ -0.26
AC016877.1-201ENST00000420417 SYNJ2O15056 1496 aa13.4□□□□□ -0.26
AC016877.1-201ENST00000420417 CLASP1Q7Z460 1538 aa13.39□□□□□ -0.27
AC016877.1-201ENST00000420417 AMER1Q5JTC6 1135 aaPredicted RBP13.39□□□□□ -0.27
AC016877.1-201ENST00000420417 FHAD1B1AJZ9 1412 aa13.39□□□□□ -0.27
AC016877.1-201ENST00000420417 SPOCK2Q92563 424 aa13.38□□□□□ -0.27
AC016877.1-201ENST00000420417 IGF1RP08069 1367 aa13.37□□□□□ -0.27
AC016877.1-201ENST00000420417 ARAP1Q96P48 1450 aa13.36□□□□□ -0.27
AC016877.1-201ENST00000420417 CHMP7Q8WUX9 453 aaPredicted RBP13.35□□□□□ -0.27
AC016877.1-201ENST00000420417 PRKAR2AP13861 404 aaKnown RBP13.34□□□□□ -0.27
AC016877.1-201ENST00000420417 CYB5RLQ6IPT4 315 aa13.34□□□□□ -0.27
AC016877.1-201ENST00000420417 RUSC2Q8N2Y8 1516 aa13.34□□□□□ -0.27
AC016877.1-201ENST00000420417 PIP4P2Q8N4L2 257 aa13.33□□□□□ -0.28
AC016877.1-201ENST00000420417 GRIN2AQ12879 1464 aa13.33□□□□□ -0.28
AC016877.1-201ENST00000420417 MNX1P50219 401 aaPredicted RBP13.32□□□□□ -0.28
AC016877.1-201ENST00000420417 CHADLQ6NUI6 762 aa13.32□□□□□ -0.28
AC016877.1-201ENST00000420417 PRXQ9BXM0 1461 aa13.31□□□□□ -0.28
AC016877.1-201ENST00000420417 RTN4Q9NQC3 1192 aaKnown RBP13.3□□□□□ -0.28
AC016877.1-201ENST00000420417 CARMIL1Q5VZK9 1371 aa13.3□□□□□ -0.28
AC016877.1-201ENST00000420417 NUP160Q12769 1436 aa13.29□□□□□ -0.28
AC016877.1-201ENST00000420417 NPM1P06748 294 aaKnown RBP eCLIP13.28□□□□□ -0.28
AC016877.1-201ENST00000420417 RAPGEF2Q9Y4G8 1499 aa13.28□□□□□ -0.28
AC016877.1-201ENST00000420417 KIF21BO75037 1637 aa13.28□□□□□ -0.28
AC016877.1-201ENST00000420417 FARP1Q9Y4F1 1045 aaPredicted RBP13.26□□□□□ -0.29
AC016877.1-201ENST00000420417 CEP170Q5SW79 1584 aa13.24□□□□□ -0.29
AC016877.1-201ENST00000420417 NUBP1P53384 320 aa13.2□□□□□ -0.3
AC016877.1-201ENST00000420417 CTTNBP2Q8WZ74 1663 aa13.2□□□□□ -0.3
AC016877.1-201ENST00000420417 SHROOM2Q13796 1616 aa13.2□□□□□ -0.3
AC016877.1-201ENST00000420417 ERCC6L2Q5T890 1561 aa13.2□□□□□ -0.3
AC016877.1-201ENST00000420417 KIAA0586Q9BVV6 1533 aa13.19□□□□□ -0.3
AC016877.1-201ENST00000420417 GOLGA3Q08378 1498 aa13.16□□□□□ -0.3
AC016877.1-201ENST00000420417 IQGAP2Q13576 1575 aa13.16□□□□□ -0.3
AC016877.1-201ENST00000420417 GSE1Q14687 1217 aa13.13□□□□□ -0.31
AC016877.1-201ENST00000420417 FAM212AQ96EL1 285 aa13.13□□□□□ -0.31
AC016877.1-201ENST00000420417 CIZ1Q9ULV3 898 aaPredicted RBP13.13□□□□□ -0.31
AC016877.1-201ENST00000420417 UGGT2Q9NYU1 1516 aa13.12□□□□□ -0.31
AC016877.1-201ENST00000420417 PKD2Q13563 968 aa13.11□□□□□ -0.31
AC016877.1-201ENST00000420417 DCAF8Q5TAQ9 597 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms