RNA–Protein interactions for RNA: ENST00000418646.5

GPCPD1-202, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 5

Gene GPCPD1, Length 4,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-202ENST00000418646 KIF27Q86VH2 1401 aa7.06□□□□□ -1.28
GPCPD1-202ENST00000418646 IGF1RP08069 1367 aa7.06□□□□□ -1.28
GPCPD1-202ENST00000418646 POLA1P09884 1462 aaPredicted RBP7.06□□□□□ -1.28
GPCPD1-202ENST00000418646 URB2Q14146 1524 aaKnown RBP7.06□□□□□ -1.28
GPCPD1-202ENST00000418646 ADAMTS12P58397 1594 aa7.05□□□□□ -1.28
GPCPD1-202ENST00000418646 GRIN2BQ13224 1484 aa7.05□□□□□ -1.28
GPCPD1-202ENST00000418646 LRRC9Q6ZRR7 1453 aa7.05□□□□□ -1.28
GPCPD1-202ENST00000418646 DNAJC5Q9H3Z4 198 aa7.04□□□□□ -1.28
GPCPD1-202ENST00000418646 TCOF1Q13428 1488 aaKnown RBP7.04□□□□□ -1.28
GPCPD1-202ENST00000418646 DHX57Q6P158 1386 aaKnown RBP7.03□□□□□ -1.28
GPCPD1-202ENST00000418646 DENND4BO75064 1496 aaPredicted RBP7.02□□□□□ -1.29
GPCPD1-202ENST00000418646 UGGT2Q9NYU1 1516 aa7.02□□□□□ -1.29
GPCPD1-202ENST00000418646 WDR62O43379 1518 aa7.01□□□□□ -1.29
GPCPD1-202ENST00000418646 MAGI3Q5TCQ9 1506 aa7.01□□□□□ -1.29
GPCPD1-202ENST00000418646 FANCD2Q9BXW9 1451 aa7.01□□□□□ -1.29
GPCPD1-202ENST00000418646 CASKIN1Q8WXD9 1431 aa7.01□□□□□ -1.29
GPCPD1-202ENST00000418646 AKNAQ7Z591 1439 aa7□□□□□ -1.29
GPCPD1-202ENST00000418646 PTPN23Q9H3S7 1636 aa6.99□□□□□ -1.29
GPCPD1-202ENST00000418646 SUPT6HQ7KZ85 1726 aaKnown RBP6.98□□□□□ -1.29
GPCPD1-202ENST00000418646 ADGBQ8N7X0 1667 aa6.98□□□□□ -1.29
GPCPD1-202ENST00000418646 EHBP1L1Q8N3D4 1523 aa6.97□□□□□ -1.29
GPCPD1-202ENST00000418646 SCAF1Q9H7N4 1312 aaKnown RBP6.95□□□□□ -1.3
GPCPD1-202ENST00000418646 DNMT1P26358 1616 aaKnown RBP6.94□□□□□ -1.3
GPCPD1-202ENST00000418646 IQGAP2Q13576 1575 aa6.94□□□□□ -1.3
GPCPD1-202ENST00000418646 E9PCH4 1651 aa6.93□□□□□ -1.3
GPCPD1-202ENST00000418646 NESP48681 1621 aa6.93□□□□□ -1.3
GPCPD1-202ENST00000418646 KIAA0556O60303 1618 aa6.93□□□□□ -1.3
GPCPD1-202ENST00000418646 PABPN1Q86U42 306 aaKnown RBP eCLIP6.93□□□□□ -1.3
GPCPD1-202ENST00000418646 CDC42BPAQ5VT25 1732 aa6.93□□□□□ -1.3
GPCPD1-202ENST00000418646 FHAD1B1AJZ9 1412 aa6.92□□□□□ -1.3
GPCPD1-202ENST00000418646 SHROOM2Q13796 1616 aa6.92□□□□□ -1.3
GPCPD1-202ENST00000418646 KDM6BO15054 1643 aa6.92□□□□□ -1.3
GPCPD1-202ENST00000418646 PHLDB1Q86UU1 1377 aa6.91□□□□□ -1.3
GPCPD1-202ENST00000418646 KDM5DQ9BY66 1539 aa6.9□□□□□ -1.3
GPCPD1-202ENST00000418646 HFM1A2PYH4 1435 aa6.9□□□□□ -1.3
GPCPD1-202ENST00000418646 CCNB3Q8WWL7 1395 aa6.9□□□□□ -1.3
GPCPD1-202ENST00000418646 EIF4G3O43432 1585 aaKnown RBP6.89□□□□□ -1.31
GPCPD1-202ENST00000418646 CCDC18Q5T9S5 1454 aa6.89□□□□□ -1.31
GPCPD1-202ENST00000418646 MBD5Q9P267 1494 aa6.89□□□□□ -1.31
GPCPD1-202ENST00000418646 ITSN2Q9NZM3 1697 aa6.89□□□□□ -1.31
GPCPD1-202ENST00000418646 RAD54L2Q9Y4B4 1467 aa6.89□□□□□ -1.31
GPCPD1-202ENST00000418646 CARMIL1Q5VZK9 1371 aa6.89□□□□□ -1.31
GPCPD1-202ENST00000418646 DISP1Q96F81 1524 aa6.88□□□□□ -1.31
GPCPD1-202ENST00000418646 PTPRKQ15262 1439 aa6.88□□□□□ -1.31
GPCPD1-202ENST00000418646 NCOA2Q15596 1464 aa6.88□□□□□ -1.31
GPCPD1-202ENST00000418646 LAMC1P11047 1609 aa6.87□□□□□ -1.31
GPCPD1-202ENST00000418646 RAPGEF6Q8TEU7 1601 aa6.86□□□□□ -1.31
GPCPD1-202ENST00000418646 KANK4Q5T7N3 995 aaPredicted RBP6.86□□□□□ -1.31
GPCPD1-202ENST00000418646 FAM9AQ8IZU1 332 aaPredicted RBP6.86□□□□□ -1.31
GPCPD1-202ENST00000418646 ABCA8O94911 1581 aa6.86□□□□□ -1.31
GPCPD1-202ENST00000418646 ADGRL2O95490 1459 aa6.86□□□□□ -1.31
GPCPD1-202ENST00000418646 CEP170Q5SW79 1584 aa6.85□□□□□ -1.31
GPCPD1-202ENST00000418646 FGD6Q6ZV73 1430 aa6.85□□□□□ -1.31
GPCPD1-202ENST00000418646 FMN1Q68DA7 1419 aa6.85□□□□□ -1.31
GPCPD1-202ENST00000418646 ACIN1Q9UKV3 1341 aaKnown RBP6.85□□□□□ -1.31
GPCPD1-202ENST00000418646 MAST1Q9Y2H9 1570 aa6.84□□□□□ -1.31
GPCPD1-202ENST00000418646 GAPVD1Q14C86 1478 aa6.84□□□□□ -1.31
GPCPD1-202ENST00000418646 NAIPQ13075 1403 aa6.83□□□□□ -1.32
GPCPD1-202ENST00000418646 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.83□□□□□ -1.32
GPCPD1-202ENST00000418646 MRC2Q9UBG0 1479 aa6.83□□□□□ -1.32
GPCPD1-202ENST00000418646 TEX14Q8IWB6 1497 aa6.83□□□□□ -1.32
GPCPD1-202ENST00000418646 MIA2Q96PC5 1412 aa6.82□□□□□ -1.32
GPCPD1-202ENST00000418646 SETD5Q9C0A6 1442 aa6.82□□□□□ -1.32
GPCPD1-202ENST00000418646 RAB3GAP2Q9H2M9 1393 aa6.82□□□□□ -1.32
GPCPD1-202ENST00000418646 EPRSP07814 1512 aaKnown RBP6.82□□□□□ -1.32
GPCPD1-202ENST00000418646 MYOM3Q5VTT5 1437 aa6.82□□□□□ -1.32
GPCPD1-202ENST00000418646 UACAQ9BZF9 1416 aa6.82□□□□□ -1.32
GPCPD1-202ENST00000418646 ARHGEF5Q12774 1597 aa6.82□□□□□ -1.32
GPCPD1-202ENST00000418646 ZNF316A6NFI3 1004 aaPredicted RBP6.81□□□□□ -1.32
GPCPD1-202ENST00000418646 CDC42BPBQ9Y5S2 1711 aa6.81□□□□□ -1.32
GPCPD1-202ENST00000418646 UNC13BO14795 1591 aa6.81□□□□□ -1.32
GPCPD1-202ENST00000418646 KIF14Q15058 1648 aa6.81□□□□□ -1.32
GPCPD1-202ENST00000418646 RNF17Q9BXT8 1623 aaKnown RBP6.81□□□□□ -1.32
GPCPD1-202ENST00000418646 NEURL4Q96JN8 1562 aa6.8□□□□□ -1.32
GPCPD1-202ENST00000418646 PREX2Q70Z35 1606 aa6.8□□□□□ -1.32
GPCPD1-202ENST00000418646 NUP160Q12769 1436 aa6.8□□□□□ -1.32
GPCPD1-202ENST00000418646 SHANK2Q9UPX8 1470 aa6.8□□□□□ -1.32
GPCPD1-202ENST00000418646 NEUROD1Q13562 356 aa6.79□□□□□ -1.32
GPCPD1-202ENST00000418646 TIMELESSQ9UNS1 1208 aa6.79□□□□□ -1.32
GPCPD1-202ENST00000418646 NUP153P49790 1475 aaKnown RBP6.79□□□□□ -1.32
GPCPD1-202ENST00000418646 MAGI2Q86UL8 1455 aa6.79□□□□□ -1.32
GPCPD1-202ENST00000418646 IFT140Q96RY7 1462 aa6.79□□□□□ -1.32
GPCPD1-202ENST00000418646 ROCK1Q13464 1354 aa6.79□□□□□ -1.32
GPCPD1-202ENST00000418646 KDM5CP41229 1560 aa6.78□□□□□ -1.32
GPCPD1-202ENST00000418646 ABCC10Q5T3U5 1492 aa6.78□□□□□ -1.32
GPCPD1-202ENST00000418646 FHOD3Q2V2M9 1422 aa6.78□□□□□ -1.32
GPCPD1-202ENST00000418646 SPATA31E1Q6ZUB1 1445 aa6.78□□□□□ -1.32
GPCPD1-202ENST00000418646 BCORL1Q5H9F3 1711 aa6.78□□□□□ -1.32
GPCPD1-202ENST00000418646 DEPDC5O75140 1603 aa6.78□□□□□ -1.32
GPCPD1-202ENST00000418646 PLXNC1O60486 1568 aa6.78□□□□□ -1.32
GPCPD1-202ENST00000418646 MAGI1Q96QZ7 1491 aaPredicted RBP6.78□□□□□ -1.32
GPCPD1-202ENST00000418646 MYO5CQ9NQX4 1742 aa6.78□□□□□ -1.32
GPCPD1-202ENST00000418646 PDS5BQ9NTI5 1447 aa6.78□□□□□ -1.32
GPCPD1-202ENST00000418646 KIAA0586Q9BVV6 1533 aa6.77□□□□□ -1.33
GPCPD1-202ENST00000418646 PTPRGP23470 1445 aa6.77□□□□□ -1.33
GPCPD1-202ENST00000418646 PELP1Q8IZL8 1130 aaKnown RBP6.77□□□□□ -1.33
GPCPD1-202ENST00000418646 IFT172Q9UG01 1749 aa6.76□□□□□ -1.33
GPCPD1-202ENST00000418646 ARHGEF12Q9NZN5 1544 aa6.76□□□□□ -1.33
GPCPD1-202ENST00000418646 DIEXFQ68CQ4 756 aaKnown RBP6.76□□□□□ -1.33
GPCPD1-202ENST00000418646 GRIN2AQ12879 1464 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms