RNA–Protein interactions for RNA: ENST00000417640.6

NECAB1-201, Transcript of N-terminal EF-hand calcium binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECAB1, Length 5,289 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB1-201ENST00000417640 CEP164Q9UPV0 1460 aa24.97■■□□□ 1.59
NECAB1-201ENST00000417640 WDR43Q15061 677 aaKnown RBP eCLIP24.96■■□□□ 1.59
NECAB1-201ENST00000417640 ANP32EQ9BTT0 268 aa24.95■■□□□ 1.58
NECAB1-201ENST00000417640 KDM2AQ9Y2K7 1162 aa24.95■■□□□ 1.58
NECAB1-201ENST00000417640 TSPY4P0CV99 314 aa24.94■■□□□ 1.58
NECAB1-201ENST00000417640 TSPY10P0CW01 314 aa24.94■■□□□ 1.58
NECAB1-201ENST00000417640 RRP7BPQ9NSQ0 103 aa24.94■■□□□ 1.58
NECAB1-201ENST00000417640 CHGAP10645 457 aaKnown RBP24.91■■□□□ 1.58
NECAB1-201ENST00000417640 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.89■■□□□ 1.58
NECAB1-201ENST00000417640 SUPT16HQ9Y5B9 1047 aaKnown RBP24.86■■□□□ 1.57
NECAB1-201ENST00000417640 KIF27Q86VH2 1401 aa24.8■■□□□ 1.56
NECAB1-201ENST00000417640 DDRGK1Q96HY6 314 aa24.76■■□□□ 1.55
NECAB1-201ENST00000417640 SIN3AQ96ST3 1273 aa24.76■■□□□ 1.55
NECAB1-201ENST00000417640 PLPPR3Q6T4P5 718 aa24.73■■□□□ 1.55
NECAB1-201ENST00000417640 PPP4R2Q9NY27 417 aa24.72■■□□□ 1.55
NECAB1-201ENST00000417640 GLIPR1L2Q4G1C9 344 aa24.71■■□□□ 1.55
NECAB1-201ENST00000417640 CCNB3Q8WWL7 1395 aa24.69■■□□□ 1.54
NECAB1-201ENST00000417640 BAZ1BQ9UIG0 1483 aaKnown RBP24.68■■□□□ 1.54
NECAB1-201ENST00000417640 ARXQ96QS3 562 aa24.66■■□□□ 1.54
NECAB1-201ENST00000417640 BAZ1AQ9NRL2 1556 aaPredicted RBP24.65■■□□□ 1.54
NECAB1-201ENST00000417640 SOGA1O94964 1423 aa24.64■■□□□ 1.54
NECAB1-201ENST00000417640 TIMELESSQ9UNS1 1208 aa24.64■■□□□ 1.53
NECAB1-201ENST00000417640 BECN1Q14457 450 aa24.63■■□□□ 1.53
NECAB1-201ENST00000417640 CECR2Q9BXF3 1484 aa24.63■■□□□ 1.53
NECAB1-201ENST00000417640 CHMP7Q8WUX9 453 aaPredicted RBP24.63■■□□□ 1.53
NECAB1-201ENST00000417640 SENP3-EIF4A1A0A087X0R7 540 aa24.57■■□□□ 1.52
NECAB1-201ENST00000417640 CCER2I3L3R5 266 aa24.57■■□□□ 1.52
NECAB1-201ENST00000417640 CARD11Q9BXL7 1154 aa24.57■■□□□ 1.52
NECAB1-201ENST00000417640 PLEKHD1A6NEE1 506 aa24.56■■□□□ 1.52
NECAB1-201ENST00000417640 PPM1GO15355 546 aaPredicted RBP24.56■■□□□ 1.52
NECAB1-201ENST00000417640 RGL3Q3MIN7 710 aa24.55■■□□□ 1.52
NECAB1-201ENST00000417640 VPS8Q8N3P4 1428 aa24.55■■□□□ 1.52
NECAB1-201ENST00000417640 CFDP1Q9UEE9 299 aaPredicted RBP24.54■■□□□ 1.52
NECAB1-201ENST00000417640 MYH16Q9H6N6 1097 aa24.51■■□□□ 1.51
NECAB1-201ENST00000417640 FHAD1B1AJZ9 1412 aa24.51■■□□□ 1.51
NECAB1-201ENST00000417640 NOP58Q9Y2X3 529 aaKnown RBP24.51■■□□□ 1.51
NECAB1-201ENST00000417640 CDCA8Q53HL2 280 aa24.5■■□□□ 1.51
NECAB1-201ENST00000417640 KNSTRNQ9Y448 316 aa24.5■■□□□ 1.51
NECAB1-201ENST00000417640 B4GALNT3Q6L9W6 998 aa24.48■■□□□ 1.51
NECAB1-201ENST00000417640 SETD5Q9C0A6 1442 aa24.45■■□□□ 1.5
NECAB1-201ENST00000417640 RBM19Q9Y4C8 960 aaKnown RBP24.42■■□□□ 1.5
NECAB1-201ENST00000417640 CFAP53Q96M91 514 aa24.4■■□□□ 1.5
NECAB1-201ENST00000417640 LAS1LQ9Y4W2 734 aaKnown RBP24.39■■□□□ 1.49
NECAB1-201ENST00000417640 TRIM44Q96DX7 344 aaPredicted RBP24.38■■□□□ 1.49
NECAB1-201ENST00000417640 CARMIL1Q5VZK9 1371 aa24.37■■□□□ 1.49
NECAB1-201ENST00000417640 KANK4Q5T7N3 995 aaPredicted RBP24.37■■□□□ 1.49
NECAB1-201ENST00000417640 GOLGA6L22H0YM25 854 aa24.36■■□□□ 1.49
NECAB1-201ENST00000417640 KCNH8Q96L42 1107 aa24.35■■□□□ 1.49
NECAB1-201ENST00000417640 MROH2BQ7Z745 1585 aa24.35■■□□□ 1.49
NECAB1-201ENST00000417640 CCDC88BA6NC98 1476 aa24.35■■□□□ 1.49
NECAB1-201ENST00000417640 ABCC8Q09428 1581 aa24.33■■□□□ 1.48
NECAB1-201ENST00000417640 ERICH6BQ5W0A0 696 aa24.32■■□□□ 1.48
NECAB1-201ENST00000417640 HSPA5P11021 654 aaKnown RBP24.31■■□□□ 1.48
NECAB1-201ENST00000417640 RGS3P49796 1198 aa24.31■■□□□ 1.48
NECAB1-201ENST00000417640 PPP1R15AO75807 674 aaPredicted RBP24.3■■□□□ 1.48
NECAB1-201ENST00000417640 CUX2O14529 1486 aa24.29■■□□□ 1.48
NECAB1-201ENST00000417640 FTSJ3Q8IY81 847 aaKnown RBP24.29■■□□□ 1.48
NECAB1-201ENST00000417640 RAB3GAP2Q9H2M9 1393 aa24.28■■□□□ 1.48
NECAB1-201ENST00000417640 A0A0G2JS52 829 aa24.27■■□□□ 1.48
NECAB1-201ENST00000417640 CC2D1BQ5T0F9 858 aaKnown RBP24.26■■□□□ 1.47
NECAB1-201ENST00000417640 ARHGAP35Q9NRY4 1499 aa24.26■■□□□ 1.47
NECAB1-201ENST00000417640 NEUROD2Q15784 382 aa24.25■■□□□ 1.47
NECAB1-201ENST00000417640 NCLP19338 710 aaKnown RBP24.24■■□□□ 1.47
NECAB1-201ENST00000417640 C14orf37Q86TY3 774 aa24.24■■□□□ 1.47
NECAB1-201ENST00000417640 TSHZ2Q9NRE2 1034 aa24.24■■□□□ 1.47
NECAB1-201ENST00000417640 DCAF11Q8TEB1 546 aa24.2■■□□□ 1.46
NECAB1-201ENST00000417640 DEKP35659 375 aaKnown RBP24.2■■□□□ 1.46
NECAB1-201ENST00000417640 FRAT1Q92837 279 aaPredicted RBP24.2■■□□□ 1.46
NECAB1-201ENST00000417640 TMF1P82094 1093 aa24.19■■□□□ 1.46
NECAB1-201ENST00000417640 RTN4Q9NQC3 1192 aaKnown RBP24.18■■□□□ 1.46
NECAB1-201ENST00000417640 MAPK8IP3Q9UPT6 1336 aa24.16■■□□□ 1.46
NECAB1-201ENST00000417640 NUDCQ9Y266 331 aa24.16■■□□□ 1.46
NECAB1-201ENST00000417640 SENP3Q9H4L4 574 aaPredicted RBP24.15■■□□□ 1.46
NECAB1-201ENST00000417640 HAP1P54257 671 aaPredicted RBP24.13■■□□□ 1.45
NECAB1-201ENST00000417640 CASC1Q6TDU7 716 aa24.13■■□□□ 1.45
NECAB1-201ENST00000417640 MS4A1P11836 297 aa24.13■■□□□ 1.45
NECAB1-201ENST00000417640 ARID4BQ4LE39 1312 aaPredicted RBP24.12■■□□□ 1.45
NECAB1-201ENST00000417640 ZBTB7CA1YPR0 619 aa24.09■■□□□ 1.45
NECAB1-201ENST00000417640 CHMP4BQ9H444 224 aaKnown RBP24.07■■□□□ 1.44
NECAB1-201ENST00000417640 PTMAP06454 111 aaKnown RBP24.07■■□□□ 1.44
NECAB1-201ENST00000417640 TNNT2P45379 298 aaPredicted RBP24.06■■□□□ 1.44
NECAB1-201ENST00000417640 MPHOSPH9Q99550 1183 aa24.06■■□□□ 1.44
NECAB1-201ENST00000417640 FOXD1Q16676 465 aa24.05■■□□□ 1.44
NECAB1-201ENST00000417640 PKD2Q13563 968 aa24.05■■□□□ 1.44
NECAB1-201ENST00000417640 EIF4G1Q04637 1599 aaKnown RBP24.04■■□□□ 1.44
NECAB1-201ENST00000417640 KTN1Q86UP2 1357 aaKnown RBP24.04■■□□□ 1.44
NECAB1-201ENST00000417640 NAP1L5Q96NT1 182 aaPredicted RBP24.04■■□□□ 1.44
NECAB1-201ENST00000417640 RCAN3Q9UKA8 241 aa24.03■■□□□ 1.44
NECAB1-201ENST00000417640 TCERG1O14776 1098 aaKnown RBP24.02■■□□□ 1.44
NECAB1-201ENST00000417640 CDK11BP21127 795 aaKnown RBP24.01■■□□□ 1.43
NECAB1-201ENST00000417640 TOP2AP11388 1531 aaKnown RBP24.01■■□□□ 1.43
NECAB1-201ENST00000417640 HSP90AB1P08238 724 aaKnown RBP24.01■■□□□ 1.43
NECAB1-201ENST00000417640 RALBP1Q15311 655 aa24.01■■□□□ 1.43
NECAB1-201ENST00000417640 DHX57Q6P158 1386 aaKnown RBP24.01■■□□□ 1.43
NECAB1-201ENST00000417640 FMN1Q68DA7 1419 aa24.01■■□□□ 1.43
NECAB1-201ENST00000417640 U2SURPO15042 1029 aaKnown RBP23.98■■□□□ 1.43
NECAB1-201ENST00000417640 WIZO95785 1651 aa23.98■■□□□ 1.43
NECAB1-201ENST00000417640 PLEKHG5O94827 1062 aa23.96■■□□□ 1.43
NECAB1-201ENST00000417640 POGKQ9P215 609 aa23.96■■□□□ 1.43
NECAB1-201ENST00000417640 HSCBQ8IWL3 235 aa23.95■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 828 ms