RNA–Protein interactions for RNA: ENST00000417382.5

HMG20B-204, Transcript of high mobility group 20B, humanhuman

TSL 4

Gene HMG20B, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-204ENST00000417382 JPH4Q96JJ6 628 aa35.7■■■■□ 3.31
HMG20B-204ENST00000417382 RAPGEF2Q9Y4G8 1499 aa35.64■■■■□ 3.3
HMG20B-204ENST00000417382 ERCC6L2Q5T890 1561 aa35.63■■■■□ 3.29
HMG20B-204ENST00000417382 PRG4Q92954 1404 aaPredicted RBP35.62■■■■□ 3.29
HMG20B-204ENST00000417382 PRXQ9BXM0 1461 aa35.51■■■■□ 3.28
HMG20B-204ENST00000417382 EEA1Q15075 1411 aa35.49■■■■□ 3.27
HMG20B-204ENST00000417382 CHIC1Q5VXU3 224 aa35.46■■■■□ 3.27
HMG20B-204ENST00000417382 IQGAP2Q13576 1575 aa35.43■■■■□ 3.26
HMG20B-204ENST00000417382 CSRNP3Q8WYN3 585 aa35.42■■■■□ 3.26
HMG20B-204ENST00000417382 CARMIL2Q6F5E8 1435 aa35.32■■■■□ 3.25
HMG20B-204ENST00000417382 UGGT2Q9NYU1 1516 aa35.3■■■■□ 3.24
HMG20B-204ENST00000417382 TNIKQ9UKE5 1360 aa35.23■■■■□ 3.23
HMG20B-204ENST00000417382 CTTNBP2Q8WZ74 1663 aa35.22■■■■□ 3.23
HMG20B-204ENST00000417382 DISP1Q96F81 1524 aa35.22■■■■□ 3.23
HMG20B-204ENST00000417382 PTPRGP23470 1445 aa35.2■■■■□ 3.23
HMG20B-204ENST00000417382 TRHP20396 242 aaPredicted RBP35.12■■■■□ 3.21
HMG20B-204ENST00000417382 FAM9AQ8IZU1 332 aaPredicted RBP35.1■■■■□ 3.21
HMG20B-204ENST00000417382 KIAA0556O60303 1618 aa35.1■■■■□ 3.21
HMG20B-204ENST00000417382 GOLGA3Q08378 1498 aa35.09■■■■□ 3.21
HMG20B-204ENST00000417382 ADCY10Q96PN6 1610 aa35.06■■■■□ 3.2
HMG20B-204ENST00000417382 KIF21BO75037 1637 aa35.06■■■■□ 3.2
HMG20B-204ENST00000417382 NPM1P06748 294 aaKnown RBP eCLIP35.03■■■■□ 3.2
HMG20B-204ENST00000417382 UHRF1BP1LA0JNW5 1464 aa34.99■■■■□ 3.19
HMG20B-204ENST00000417382 UACAQ9BZF9 1416 aa34.97■■■■□ 3.19
HMG20B-204ENST00000417382 MAPKBP1O60336 1514 aa34.96■■■■□ 3.19
HMG20B-204ENST00000417382 TTBK1Q5TCY1 1321 aaPredicted RBP34.93■■■■□ 3.18
HMG20B-204ENST00000417382 ABCC2Q92887 1545 aa34.91■■■■□ 3.18
HMG20B-204ENST00000417382 SAMD9Q5K651 1589 aa34.83■■■■□ 3.17
HMG20B-204ENST00000417382 ABCC10Q5T3U5 1492 aa34.8■■■■□ 3.16
HMG20B-204ENST00000417382 KDM5BQ9UGL1 1544 aa34.79■■■■□ 3.16
HMG20B-204ENST00000417382 PLB1Q6P1J6 1458 aa34.75■■■■□ 3.15
HMG20B-204ENST00000417382 ABCA8O94911 1581 aa34.74■■■■□ 3.15
HMG20B-204ENST00000417382 UBTFP17480 764 aaKnown RBP34.71■■■■□ 3.15
HMG20B-204ENST00000417382 KIF13AQ9H1H9 1805 aa34.71■■■■□ 3.15
HMG20B-204ENST00000417382 P3H3Q8IVL6 736 aa34.69■■■■□ 3.14
HMG20B-204ENST00000417382 EFCAB5A4FU69 1503 aa34.69■■■■□ 3.14
HMG20B-204ENST00000417382 DIP2BQ9P265 1576 aa34.69■■■■□ 3.14
HMG20B-204ENST00000417382 FAM69CQ0P6D2 419 aa34.68■■■■□ 3.14
HMG20B-204ENST00000417382 ASXL2Q76L83 1435 aa34.68■■■■□ 3.14
HMG20B-204ENST00000417382 ZCCHC11Q5TAX3 1644 aaKnown RBP34.63■■■■□ 3.13
HMG20B-204ENST00000417382 RANGAP1P46060 587 aaPredicted RBP34.58■■■■□ 3.13
HMG20B-204ENST00000417382 FHOD3Q2V2M9 1422 aa34.57■■■■□ 3.13
HMG20B-204ENST00000417382 EHMT2Q96KQ7 1210 aa34.56■■■■□ 3.12
HMG20B-204ENST00000417382 GLI2P10070 1586 aa34.54■■■■□ 3.12
HMG20B-204ENST00000417382 WDR7Q9Y4E6 1490 aa34.5■■■■□ 3.11
HMG20B-204ENST00000417382 RAPGEF6Q8TEU7 1601 aa34.49■■■■□ 3.11
HMG20B-204ENST00000417382 EPRSP07814 1512 aaKnown RBP34.49■■■■□ 3.11
HMG20B-204ENST00000417382 ATP10BO94823 1461 aa34.46■■■■□ 3.11
HMG20B-204ENST00000417382 ARHGAP35Q9NRY4 1499 aa34.45■■■■□ 3.1
HMG20B-204ENST00000417382 NUP153P49790 1475 aaKnown RBP34.4■■■■□ 3.1
HMG20B-204ENST00000417382 FMN1Q68DA7 1419 aa34.38■■■■□ 3.09
HMG20B-204ENST00000417382 MAP3K4Q9Y6R4 1608 aa34.31■■■■□ 3.08
HMG20B-204ENST00000417382 ARID3CA6NKF2 412 aa34.29■■■■□ 3.08
HMG20B-204ENST00000417382 TSPOAP1O95153 1857 aa34.27■■■■□ 3.08
HMG20B-204ENST00000417382 KCNH8Q96L42 1107 aa34.25■■■■□ 3.07
HMG20B-204ENST00000417382 PPRC1Q5VV67 1664 aaKnown RBP34.24■■■■□ 3.07
HMG20B-204ENST00000417382 TEX14Q8IWB6 1497 aa34.22■■■■□ 3.07
HMG20B-204ENST00000417382 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.22■■■■□ 3.07
HMG20B-204ENST00000417382 HNRNPUL2Q1KMD3 747 aaKnown RBP34.22■■■■□ 3.07
HMG20B-204ENST00000417382 CFAP43Q8NDM7 1665 aa34.2■■■■□ 3.07
HMG20B-204ENST00000417382 CLIP1P30622 1438 aa34.2■■■■□ 3.06
HMG20B-204ENST00000417382 CD109Q6YHK3 1445 aa34.19■■■■□ 3.06
HMG20B-204ENST00000417382 MAGI3Q5TCQ9 1506 aa34.18■■■■□ 3.06
HMG20B-204ENST00000417382 HECW1Q76N89 1606 aa34.18■■■■□ 3.06
HMG20B-204ENST00000417382 PLEKHD1A6NEE1 506 aa34.17■■■■□ 3.06
HMG20B-204ENST00000417382 KDM6BO15054 1643 aa34.14■■■■□ 3.06
HMG20B-204ENST00000417382 ABCA9Q8IUA7 1624 aa34.11■■■■□ 3.05
HMG20B-204ENST00000417382 CASKIN1Q8WXD9 1431 aa34.09■■■■□ 3.05
HMG20B-204ENST00000417382 CDK13Q14004 1512 aaKnown RBP34.08■■■■□ 3.05
HMG20B-204ENST00000417382 ATP1B4Q9UN42 357 aaPredicted RBP34.04■■■■□ 3.04
HMG20B-204ENST00000417382 CDK11AQ9UQ88 783 aaPredicted RBP34.04■■■■□ 3.04
HMG20B-204ENST00000417382 CEP162Q5TB80 1403 aa33.99■■■■□ 3.03
HMG20B-204ENST00000417382 FYCO1Q9BQS8 1478 aa33.99■■■■□ 3.03
HMG20B-204ENST00000417382 PHLDB1Q86UU1 1377 aa33.98■■■■□ 3.03
HMG20B-204ENST00000417382 PCF11O94913 1555 aaKnown RBP33.98■■■■□ 3.03
HMG20B-204ENST00000417382 COL17A1Q9UMD9 1497 aaPredicted RBP33.97■■■■□ 3.03
HMG20B-204ENST00000417382 CCDC18Q5T9S5 1454 aa33.96■■■■□ 3.03
HMG20B-204ENST00000417382 LOC105371045A0A1W2PR82 267 aa33.92■■■■□ 3.02
HMG20B-204ENST00000417382 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.92■■■■□ 3.026e-8■□□□□ 8.9
HMG20B-204ENST00000417382 NEO1Q92859 1461 aa33.9■■■■□ 3.02
HMG20B-204ENST00000417382 TROQ12816 1431 aaPredicted RBP33.9■■■■□ 3.02
HMG20B-204ENST00000417382 ARAP3Q8WWN8 1544 aa33.89■■■■□ 3.02
HMG20B-204ENST00000417382 LRRIQ1Q96JM4 1722 aa33.88■■■■□ 3.01
HMG20B-204ENST00000417382 TTC37Q6PGP7 1564 aa33.83■■■■□ 3.01
HMG20B-204ENST00000417382 KIF14Q15058 1648 aa33.78■■■■□ 3
HMG20B-204ENST00000417382 PLCH2O75038 1416 aa33.78■■■■□ 3
HMG20B-204ENST00000417382 CFAP74Q9C0B2 1584 aa33.75■■■□□ 2.99
HMG20B-204ENST00000417382 FANCAO15360 1455 aa33.75■■■□□ 2.99
HMG20B-204ENST00000417382 AKNAQ7Z591 1439 aa33.7■■■□□ 2.99
HMG20B-204ENST00000417382 MYO5CQ9NQX4 1742 aa33.65■■■□□ 2.98
HMG20B-204ENST00000417382 EFCAB2Q5VUJ9 269 aa33.64■■■□□ 2.98
HMG20B-204ENST00000417382 VPS8Q8N3P4 1428 aa33.63■■■□□ 2.97
HMG20B-204ENST00000417382 DENND4BO75064 1496 aaPredicted RBP33.62■■■□□ 2.97
HMG20B-204ENST00000417382 RAPGEF3O95398 923 aa33.61■■■□□ 2.97
HMG20B-204ENST00000417382 FRMPD1Q5SYB0 1578 aa33.57■■■□□ 2.96
HMG20B-204ENST00000417382 MTUS2Q5JR59 1369 aa33.56■■■□□ 2.96
HMG20B-204ENST00000417382 ADGRL1O94910 1474 aa33.56■■■□□ 2.96
HMG20B-204ENST00000417382 ARHGAP5Q13017 1502 aa33.53■■■□□ 2.96
HMG20B-204ENST00000417382 RICTORQ6R327 1708 aa33.52■■■□□ 2.96
HMG20B-204ENST00000417382 SCAPERQ9BY12 1400 aa33.52■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms