RNA–Protein interactions for RNA: ENST00000416918.5

TRAPPC12-205, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-205ENST00000416918 AQRO60306 1485 aaKnown RBP eCLIP16.78■□□□□ 0.28
TRAPPC12-205ENST00000416918 FMN1Q68DA7 1419 aa16.76■□□□□ 0.27
TRAPPC12-205ENST00000416918 CTTNBP2Q8WZ74 1663 aa16.73■□□□□ 0.27
TRAPPC12-205ENST00000416918 CASKIN1Q8WXD9 1431 aa16.7■□□□□ 0.26
TRAPPC12-205ENST00000416918 FYCO1Q9BQS8 1478 aa16.69■□□□□ 0.26
TRAPPC12-205ENST00000416918 ADAMTS12P58397 1594 aa16.68■□□□□ 0.26
TRAPPC12-205ENST00000416918 PBRM1Q86U86 1689 aa16.67■□□□□ 0.26
TRAPPC12-205ENST00000416918 THOC2Q8NI27 1593 aaKnown RBP16.67■□□□□ 0.26
TRAPPC12-205ENST00000416918 MAGI1Q96QZ7 1491 aaPredicted RBP16.67■□□□□ 0.26
TRAPPC12-205ENST00000416918 TIAM1Q13009 1591 aa16.64■□□□□ 0.25
TRAPPC12-205ENST00000416918 SAMD9Q5K651 1589 aa16.64■□□□□ 0.25
TRAPPC12-205ENST00000416918 RRBP1Q9P2E9 1410 aaKnown RBP16.63■□□□□ 0.25
TRAPPC12-205ENST00000416918 CCER1Q8TC90 406 aaPredicted RBP16.62■□□□□ 0.25
TRAPPC12-205ENST00000416918 KIAA0586Q9BVV6 1533 aa16.61■□□□□ 0.25
TRAPPC12-205ENST00000416918 KANK4Q5T7N3 995 aaPredicted RBP16.6■□□□□ 0.25
TRAPPC12-205ENST00000416918 TTBK1Q5TCY1 1321 aaPredicted RBP16.6■□□□□ 0.25
TRAPPC12-205ENST00000416918 LRRC9Q6ZRR7 1453 aa16.6■□□□□ 0.25
TRAPPC12-205ENST00000416918 FHOD3Q2V2M9 1422 aa16.59■□□□□ 0.25
TRAPPC12-205ENST00000416918 ZNF608Q9ULD9 1512 aaPredicted RBP16.59■□□□□ 0.25
TRAPPC12-205ENST00000416918 IQGAP2Q13576 1575 aa16.59■□□□□ 0.25
TRAPPC12-205ENST00000416918 UGGT2Q9NYU1 1516 aa16.58■□□□□ 0.24
TRAPPC12-205ENST00000416918 SYNJ2O15056 1496 aa16.57■□□□□ 0.24
TRAPPC12-205ENST00000416918 CCNB3Q8WWL7 1395 aa16.56■□□□□ 0.24
TRAPPC12-205ENST00000416918 EIF4G3O43432 1585 aaKnown RBP16.55■□□□□ 0.24
TRAPPC12-205ENST00000416918 GRIN2AQ12879 1464 aa16.55■□□□□ 0.24
TRAPPC12-205ENST00000416918 SNAPC4Q5SXM2 1469 aa16.55■□□□□ 0.24
TRAPPC12-205ENST00000416918 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.55■□□□□ 0.243e-6■■■■□ 26.4
TRAPPC12-205ENST00000416918 CLSPNQ9HAW4 1339 aa16.55■□□□□ 0.24
TRAPPC12-205ENST00000416918 CFAP43Q8NDM7 1665 aa16.54■□□□□ 0.24
TRAPPC12-205ENST00000416918 P3H3Q8IVL6 736 aa16.54■□□□□ 0.24
TRAPPC12-205ENST00000416918 CHMP7Q8WUX9 453 aaPredicted RBP16.54■□□□□ 0.24
TRAPPC12-205ENST00000416918 PCF11O94913 1555 aaKnown RBP16.53■□□□□ 0.24
TRAPPC12-205ENST00000416918 CCDC18Q5T9S5 1454 aa16.53■□□□□ 0.24
TRAPPC12-205ENST00000416918 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.5■□□□□ 0.23
TRAPPC12-205ENST00000416918 HNRNPUL2Q1KMD3 747 aaKnown RBP16.49■□□□□ 0.23
TRAPPC12-205ENST00000416918 ATP1B4Q9UN42 357 aaPredicted RBP16.47■□□□□ 0.23
TRAPPC12-205ENST00000416918 NUP160Q12769 1436 aa16.46■□□□□ 0.23
TRAPPC12-205ENST00000416918 MTUS2Q5JR59 1369 aa16.46■□□□□ 0.23
TRAPPC12-205ENST00000416918 CARMIL2Q6F5E8 1435 aa16.45■□□□□ 0.22
TRAPPC12-205ENST00000416918 HECW1Q76N89 1606 aa16.43■□□□□ 0.22
TRAPPC12-205ENST00000416918 CDK11AQ9UQ88 783 aaPredicted RBP16.42■□□□□ 0.22
TRAPPC12-205ENST00000416918 EHBP1L1Q8N3D4 1523 aa16.4■□□□□ 0.22
TRAPPC12-205ENST00000416918 ACIN1Q9UKV3 1341 aaKnown RBP16.4■□□□□ 0.22
TRAPPC12-205ENST00000416918 PHLDB1Q86UU1 1377 aa16.38■□□□□ 0.21
TRAPPC12-205ENST00000416918 JPH4Q96JJ6 628 aa16.38■□□□□ 0.21
TRAPPC12-205ENST00000416918 DISP1Q96F81 1524 aa16.38■□□□□ 0.21
TRAPPC12-205ENST00000416918 KIAA0556O60303 1618 aa16.37■□□□□ 0.21
TRAPPC12-205ENST00000416918 EPRSP07814 1512 aaKnown RBP16.35■□□□□ 0.21
TRAPPC12-205ENST00000416918 FBLN2P98095 1184 aa16.34■□□□□ 0.21
TRAPPC12-205ENST00000416918 FGD6Q6ZV73 1430 aa16.34■□□□□ 0.21
TRAPPC12-205ENST00000416918 CEP170Q5SW79 1584 aa16.34■□□□□ 0.21
TRAPPC12-205ENST00000416918 SUPT6HQ7KZ85 1726 aaKnown RBP16.33■□□□□ 0.21
TRAPPC12-205ENST00000416918 MYOM3Q5VTT5 1437 aa16.33■□□□□ 0.2
TRAPPC12-205ENST00000416918 NCOA2Q15596 1464 aa16.32■□□□□ 0.2
TRAPPC12-205ENST00000416918 MIA2Q96PC5 1412 aa16.32■□□□□ 0.2
TRAPPC12-205ENST00000416918 SETD5Q9C0A6 1442 aa16.31■□□□□ 0.2
TRAPPC12-205ENST00000416918 ARHGEF11O15085 1522 aa16.3■□□□□ 0.2
TRAPPC12-205ENST00000416918 FAM50AQ14320 339 aaKnown RBP16.3■□□□□ 0.2
TRAPPC12-205ENST00000416918 RAPGEF6Q8TEU7 1601 aa16.27■□□□□ 0.19
TRAPPC12-205ENST00000416918 DHX57Q6P158 1386 aaKnown RBP16.26■□□□□ 0.19
TRAPPC12-205ENST00000416918 TCOF1Q13428 1488 aaKnown RBP16.24■□□□□ 0.19
TRAPPC12-205ENST00000416918 NUP153P49790 1475 aaKnown RBP16.23■□□□□ 0.19
TRAPPC12-205ENST00000416918 TIMELESSQ9UNS1 1208 aa16.23■□□□□ 0.19
TRAPPC12-205ENST00000416918 RAB3GAP2Q9H2M9 1393 aa16.22■□□□□ 0.19
TRAPPC12-205ENST00000416918 TROQ12816 1431 aaPredicted RBP16.2■□□□□ 0.18
TRAPPC12-205ENST00000416918 AKNAQ7Z591 1439 aa16.2■□□□□ 0.18
TRAPPC12-205ENST00000416918 LRRIQ1Q96JM4 1722 aa16.2■□□□□ 0.18
TRAPPC12-205ENST00000416918 ITGAEP38570 1179 aa16.2■□□□□ 0.18
TRAPPC12-205ENST00000416918 HFM1A2PYH4 1435 aa16.19■□□□□ 0.18
TRAPPC12-205ENST00000416918 PTPRGP23470 1445 aa16.19■□□□□ 0.18
TRAPPC12-205ENST00000416918 PRG4Q92954 1404 aaPredicted RBP16.18■□□□□ 0.18
TRAPPC12-205ENST00000416918 PLEKHD1A6NEE1 506 aa16.17■□□□□ 0.18
TRAPPC12-205ENST00000416918 MAGI3Q5TCQ9 1506 aa16.17■□□□□ 0.18
TRAPPC12-205ENST00000416918 ABCA8O94911 1581 aa16.17■□□□□ 0.18
TRAPPC12-205ENST00000416918 CDK13Q14004 1512 aaKnown RBP16.16■□□□□ 0.18
TRAPPC12-205ENST00000416918 PTPN23Q9H3S7 1636 aa16.16■□□□□ 0.18
TRAPPC12-205ENST00000416918 SHROOM2Q13796 1616 aa16.13■□□□□ 0.17
TRAPPC12-205ENST00000416918 PLB1Q6P1J6 1458 aa16.13■□□□□ 0.17
TRAPPC12-205ENST00000416918 ROCK1Q13464 1354 aa16.13■□□□□ 0.17
TRAPPC12-205ENST00000416918 ZNF316A6NFI3 1004 aaPredicted RBP16.11■□□□□ 0.17
TRAPPC12-205ENST00000416918 ADCY10Q96PN6 1610 aa16.09■□□□□ 0.17
TRAPPC12-205ENST00000416918 UACAQ9BZF9 1416 aa16.09■□□□□ 0.17
TRAPPC12-205ENST00000416918 CHD1O14646 1710 aa16.08■□□□□ 0.17
TRAPPC12-205ENST00000416918 ATP10BO94823 1461 aa16.08■□□□□ 0.16
TRAPPC12-205ENST00000416918 NAIPQ13075 1403 aa16.07■□□□□ 0.16
TRAPPC12-205ENST00000416918 CFDP1Q9UEE9 299 aaPredicted RBP16.06■□□□□ 0.16
TRAPPC12-205ENST00000416918 ITSN2Q9NZM3 1697 aa16.05■□□□□ 0.16
TRAPPC12-205ENST00000416918 RSPH4AQ5TD94 716 aa16.05■□□□□ 0.16
TRAPPC12-205ENST00000416918 CLASP1Q7Z460 1538 aa16.04■□□□□ 0.16
TRAPPC12-205ENST00000416918 PTPRKQ15262 1439 aa16.03■□□□□ 0.16
TRAPPC12-205ENST00000416918 GPATCH8Q9UKJ3 1502 aaKnown RBP16.03■□□□□ 0.16
TRAPPC12-205ENST00000416918 UHRF1BP1LA0JNW5 1464 aa16.03■□□□□ 0.16
TRAPPC12-205ENST00000416918 KIF14Q15058 1648 aa16.01■□□□□ 0.15
TRAPPC12-205ENST00000416918 DAPK1P53355 1430 aa16.01■□□□□ 0.15
TRAPPC12-205ENST00000416918 ARID3CA6NKF2 412 aa16■□□□□ 0.15
TRAPPC12-205ENST00000416918 MAPKBP1O60336 1514 aa15.99■□□□□ 0.15
TRAPPC12-205ENST00000416918 DNMT1P26358 1616 aaKnown RBP15.99■□□□□ 0.15
TRAPPC12-205ENST00000416918 ABCC2Q92887 1545 aa15.99■□□□□ 0.15
TRAPPC12-205ENST00000416918 ABCC10Q5T3U5 1492 aa15.98■□□□□ 0.15
TRAPPC12-205ENST00000416918 ABCC5O15440 1437 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 331.4 ms