RNA–Protein interactions for RNA: ENST00000416177.1

ABCB1-202, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 5

Gene ABCB1, Length 461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-202ENST00000416177 GRIN2AQ12879 1464 aa17.91■□□□□ 0.46
ABCB1-202ENST00000416177 NUP160Q12769 1436 aa17.86■□□□□ 0.45
ABCB1-202ENST00000416177 CEP170Q5SW79 1584 aa17.79■□□□□ 0.44
ABCB1-202ENST00000416177 SHROOM2Q13796 1616 aa17.77■□□□□ 0.44
ABCB1-202ENST00000416177 KIF27Q86VH2 1401 aa17.77■□□□□ 0.44
ABCB1-202ENST00000416177 CUL7Q14999 1698 aa17.74■□□□□ 0.43
ABCB1-202ENST00000416177 IGF1RP08069 1367 aa17.67■□□□□ 0.42
ABCB1-202ENST00000416177 TRHP20396 242 aaPredicted RBP17.67■□□□□ 0.42
ABCB1-202ENST00000416177 RUSC2Q8N2Y8 1516 aa17.67■□□□□ 0.42
ABCB1-202ENST00000416177 JPH4Q96JJ6 628 aa17.65■□□□□ 0.42
ABCB1-202ENST00000416177 POTEDQ86YR6 584 aa17.64■□□□□ 0.41
ABCB1-202ENST00000416177 ERCC6L2Q5T890 1561 aa17.64■□□□□ 0.41
ABCB1-202ENST00000416177 KIAA0586Q9BVV6 1533 aa17.63■□□□□ 0.41
ABCB1-202ENST00000416177 PRG4Q92954 1404 aaPredicted RBP17.63■□□□□ 0.41
ABCB1-202ENST00000416177 CARMIL1Q5VZK9 1371 aa17.59■□□□□ 0.41
ABCB1-202ENST00000416177 RAPGEF2Q9Y4G8 1499 aa17.48■□□□□ 0.39
ABCB1-202ENST00000416177 CARMIL2Q6F5E8 1435 aa17.47■□□□□ 0.39
ABCB1-202ENST00000416177 IQGAP2Q13576 1575 aa17.47■□□□□ 0.39
ABCB1-202ENST00000416177 NPM1P06748 294 aaKnown RBP eCLIP17.46■□□□□ 0.39
ABCB1-202ENST00000416177 MAPKBP1O60336 1514 aa17.43■□□□□ 0.38
ABCB1-202ENST00000416177 TNIKQ9UKE5 1360 aa17.4■□□□□ 0.38
ABCB1-202ENST00000416177 PTPRGP23470 1445 aa17.4■□□□□ 0.38
ABCB1-202ENST00000416177 ADCY10Q96PN6 1610 aa17.39■□□□□ 0.38
ABCB1-202ENST00000416177 KIF13AQ9H1H9 1805 aa17.38■□□□□ 0.37
ABCB1-202ENST00000416177 UGGT2Q9NYU1 1516 aa17.38■□□□□ 0.37
ABCB1-202ENST00000416177 ABCC10Q5T3U5 1492 aa17.36■□□□□ 0.37
ABCB1-202ENST00000416177 CTTNBP2Q8WZ74 1663 aa17.35■□□□□ 0.37
ABCB1-202ENST00000416177 UHRF1BP1LA0JNW5 1464 aa17.33■□□□□ 0.37
ABCB1-202ENST00000416177 DISP1Q96F81 1524 aa17.32■□□□□ 0.36
ABCB1-202ENST00000416177 PRXQ9BXM0 1461 aa17.32■□□□□ 0.36
ABCB1-202ENST00000416177 ABCC2Q92887 1545 aa17.31■□□□□ 0.36
ABCB1-202ENST00000416177 KIAA0556O60303 1618 aa17.3■□□□□ 0.36
ABCB1-202ENST00000416177 DIP2BQ9P265 1576 aa17.3■□□□□ 0.36
ABCB1-202ENST00000416177 GOLGA3Q08378 1498 aa17.3■□□□□ 0.36
ABCB1-202ENST00000416177 EEA1Q15075 1411 aa17.29■□□□□ 0.36
ABCB1-202ENST00000416177 UACAQ9BZF9 1416 aa17.29■□□□□ 0.36
ABCB1-202ENST00000416177 FAM69CQ0P6D2 419 aa17.28■□□□□ 0.36
ABCB1-202ENST00000416177 PLB1Q6P1J6 1458 aa17.25■□□□□ 0.35
ABCB1-202ENST00000416177 KDM5BQ9UGL1 1544 aa17.22■□□□□ 0.35
ABCB1-202ENST00000416177 FAM9AQ8IZU1 332 aaPredicted RBP17.22■□□□□ 0.35
ABCB1-202ENST00000416177 CSRNP3Q8WYN3 585 aa17.21■□□□□ 0.35
ABCB1-202ENST00000416177 GLI2P10070 1586 aa17.2■□□□□ 0.34
ABCB1-202ENST00000416177 TTBK1Q5TCY1 1321 aaPredicted RBP17.2■□□□□ 0.34
ABCB1-202ENST00000416177 ASXL2Q76L83 1435 aa17.19■□□□□ 0.34
ABCB1-202ENST00000416177 ZCCHC11Q5TAX3 1644 aaKnown RBP17.15■□□□□ 0.34
ABCB1-202ENST00000416177 KDM6BO15054 1643 aa17.13■□□□□ 0.33
ABCB1-202ENST00000416177 TSPOAP1O95153 1857 aa17.12■□□□□ 0.33
ABCB1-202ENST00000416177 ABCA8O94911 1581 aa17.12■□□□□ 0.33
ABCB1-202ENST00000416177 EPRSP07814 1512 aaKnown RBP17.11■□□□□ 0.33
ABCB1-202ENST00000416177 WDR7Q9Y4E6 1490 aa17.09■□□□□ 0.33
ABCB1-202ENST00000416177 SAMD9Q5K651 1589 aa17.09■□□□□ 0.33
ABCB1-202ENST00000416177 MAP3K4Q9Y6R4 1608 aa17.08■□□□□ 0.32
ABCB1-202ENST00000416177 TEX14Q8IWB6 1497 aa17.08■□□□□ 0.32
ABCB1-202ENST00000416177 KIF21BO75037 1637 aa17.07■□□□□ 0.32
ABCB1-202ENST00000416177 PPRC1Q5VV67 1664 aaKnown RBP17.05■□□□□ 0.32
ABCB1-202ENST00000416177 CFAP43Q8NDM7 1665 aa17.02■□□□□ 0.32
ABCB1-202ENST00000416177 EFCAB5A4FU69 1503 aa17■□□□□ 0.31
ABCB1-202ENST00000416177 RAPGEF6Q8TEU7 1601 aa16.99■□□□□ 0.31
ABCB1-202ENST00000416177 MAGI3Q5TCQ9 1506 aa16.98■□□□□ 0.31
ABCB1-202ENST00000416177 MAPK8IP2Q13387 824 aaPredicted RBP16.97■□□□□ 0.31
ABCB1-202ENST00000416177 ATP10BO94823 1461 aa16.95■□□□□ 0.3
ABCB1-202ENST00000416177 P3H3Q8IVL6 736 aa16.95■□□□□ 0.3
ABCB1-202ENST00000416177 CD109Q6YHK3 1445 aa16.95■□□□□ 0.3
ABCB1-202ENST00000416177 PHLDB1Q86UU1 1377 aa16.9■□□□□ 0.3
ABCB1-202ENST00000416177 KCNH8Q96L42 1107 aa16.9■□□□□ 0.3
ABCB1-202ENST00000416177 ABCA9Q8IUA7 1624 aa16.89■□□□□ 0.29
ABCB1-202ENST00000416177 FHOD3Q2V2M9 1422 aa16.89■□□□□ 0.29
ABCB1-202ENST00000416177 NUP153P49790 1475 aaKnown RBP16.88■□□□□ 0.29
ABCB1-202ENST00000416177 COL17A1Q9UMD9 1497 aaPredicted RBP16.86■□□□□ 0.29
ABCB1-202ENST00000416177 UBTFP17480 764 aaKnown RBP16.86■□□□□ 0.29
ABCB1-202ENST00000416177 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.85■□□□□ 0.29
ABCB1-202ENST00000416177 HNRNPUL2Q1KMD3 747 aaKnown RBP16.85■□□□□ 0.29
ABCB1-202ENST00000416177 FMN1Q68DA7 1419 aa16.85■□□□□ 0.29
ABCB1-202ENST00000416177 SCAF1Q9H7N4 1312 aaKnown RBP16.84■□□□□ 0.29
ABCB1-202ENST00000416177 ARAP3Q8WWN8 1544 aa16.84■□□□□ 0.29
ABCB1-202ENST00000416177 PLEKHD1A6NEE1 506 aa16.83■□□□□ 0.28
ABCB1-202ENST00000416177 NEO1Q92859 1461 aa16.82■□□□□ 0.28
ABCB1-202ENST00000416177 RANGAP1P46060 587 aaPredicted RBP16.82■□□□□ 0.28
ABCB1-202ENST00000416177 ARID3CA6NKF2 412 aa16.8■□□□□ 0.28
ABCB1-202ENST00000416177 HECW1Q76N89 1606 aa16.78■□□□□ 0.28
ABCB1-202ENST00000416177 KDM4FA0A1W2PPD8 638 aa16.78■□□□□ 0.28
ABCB1-202ENST00000416177 DMRT2Q9Y5R5 561 aa16.77■□□□□ 0.28
ABCB1-202ENST00000416177 ARHGAP35Q9NRY4 1499 aa16.77■□□□□ 0.28
ABCB1-202ENST00000416177 CFAP74Q9C0B2 1584 aa16.77■□□□□ 0.27
ABCB1-202ENST00000416177 CDK11AQ9UQ88 783 aaPredicted RBP16.75■□□□□ 0.27
ABCB1-202ENST00000416177 ADGRL1O94910 1474 aa16.74■□□□□ 0.27
ABCB1-202ENST00000416177 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.7■□□□□ 0.26
ABCB1-202ENST00000416177 PPP4R3CPQ6ZMV5 832 aa16.69■□□□□ 0.26
ABCB1-202ENST00000416177 CDK13Q14004 1512 aaKnown RBP16.69■□□□□ 0.26
ABCB1-202ENST00000416177 FANCAO15360 1455 aa16.67■□□□□ 0.26
ABCB1-202ENST00000416177 TTC37Q6PGP7 1564 aa16.66■□□□□ 0.26
ABCB1-202ENST00000416177 AKNAQ7Z591 1439 aa16.66■□□□□ 0.26
ABCB1-202ENST00000416177 EHMT2Q96KQ7 1210 aa16.66■□□□□ 0.26
ABCB1-202ENST00000416177 DENND4BO75064 1496 aaPredicted RBP16.66■□□□□ 0.26
ABCB1-202ENST00000416177 CCDC18Q5T9S5 1454 aa16.66■□□□□ 0.26
ABCB1-202ENST00000416177 CLIP1P30622 1438 aa16.65■□□□□ 0.26
ABCB1-202ENST00000416177 PLCH2O75038 1416 aa16.64■□□□□ 0.25
ABCB1-202ENST00000416177 KIF14Q15058 1648 aa16.64■□□□□ 0.25
ABCB1-202ENST00000416177 ATP1B4Q9UN42 357 aaPredicted RBP16.64■□□□□ 0.25
ABCB1-202ENST00000416177 TROQ12816 1431 aaPredicted RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms