RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 CUL7Q14999 1698 aa30.38■■■□□ 2.45
PDLIM2-208ENST00000416159 RUSC2Q8N2Y8 1516 aa30.36■■■□□ 2.45
PDLIM2-208ENST00000416159 CARMIL1Q5VZK9 1371 aa30.3■■■□□ 2.44
PDLIM2-208ENST00000416159 KIAA0586Q9BVV6 1533 aa30.3■■■□□ 2.44
PDLIM2-208ENST00000416159 NPM1P06748 294 aaKnown RBP eCLIP30.09■■■□□ 2.41
PDLIM2-208ENST00000416159 RAPGEF2Q9Y4G8 1499 aa30.04■■■□□ 2.4
PDLIM2-208ENST00000416159 CARMIL2Q6F5E8 1435 aa30.02■■■□□ 2.4
PDLIM2-208ENST00000416159 IQGAP2Q13576 1575 aa30■■■□□ 2.39
PDLIM2-208ENST00000416159 PTPRGP23470 1445 aa29.99■■■□□ 2.39
PDLIM2-208ENST00000416159 ADCY10Q96PN6 1610 aa29.97■■■□□ 2.39
PDLIM2-208ENST00000416159 TNIKQ9UKE5 1360 aa29.96■■■□□ 2.39
PDLIM2-208ENST00000416159 MAPKBP1O60336 1514 aa29.93■■■□□ 2.38
PDLIM2-208ENST00000416159 KIF13AQ9H1H9 1805 aa29.93■■■□□ 2.38
PDLIM2-208ENST00000416159 TTBK1Q5TCY1 1321 aaPredicted RBP29.91■■■□□ 2.38
PDLIM2-208ENST00000416159 ABCC10Q5T3U5 1492 aa29.89■■■□□ 2.38
PDLIM2-208ENST00000416159 FAM69CQ0P6D2 419 aa29.89■■■□□ 2.38
PDLIM2-208ENST00000416159 DISP1Q96F81 1524 aa29.84■■■□□ 2.37
PDLIM2-208ENST00000416159 UGGT2Q9NYU1 1516 aa29.84■■■□□ 2.37
PDLIM2-208ENST00000416159 DIP2BQ9P265 1576 aa29.77■■■□□ 2.36
PDLIM2-208ENST00000416159 ABCC2Q92887 1545 aa29.77■■■□□ 2.36
PDLIM2-208ENST00000416159 PRXQ9BXM0 1461 aa29.77■■■□□ 2.36
PDLIM2-208ENST00000416159 UACAQ9BZF9 1416 aa29.76■■■□□ 2.35
PDLIM2-208ENST00000416159 UHRF1BP1LA0JNW5 1464 aa29.75■■■□□ 2.35
PDLIM2-208ENST00000416159 CTTNBP2Q8WZ74 1663 aa29.72■■■□□ 2.35
PDLIM2-208ENST00000416159 KIAA0556O60303 1618 aa29.72■■■□□ 2.35
PDLIM2-208ENST00000416159 CSRNP3Q8WYN3 585 aa29.66■■■□□ 2.34
PDLIM2-208ENST00000416159 GOLGA3Q08378 1498 aa29.66■■■□□ 2.34
PDLIM2-208ENST00000416159 PLB1Q6P1J6 1458 aa29.66■■■□□ 2.34
PDLIM2-208ENST00000416159 ASXL2Q76L83 1435 aa29.64■■■□□ 2.34
PDLIM2-208ENST00000416159 KDM5BQ9UGL1 1544 aa29.61■■■□□ 2.33
PDLIM2-208ENST00000416159 TSPOAP1O95153 1857 aa29.57■■■□□ 2.32
PDLIM2-208ENST00000416159 EEA1Q15075 1411 aa29.56■■■□□ 2.32
PDLIM2-208ENST00000416159 AEBP2Q6ZN18 517 aaPredicted RBP29.56■■■□□ 2.32
PDLIM2-208ENST00000416159 GLI2P10070 1586 aa29.54■■■□□ 2.32
PDLIM2-208ENST00000416159 ZCCHC11Q5TAX3 1644 aaKnown RBP29.51■■■□□ 2.31
PDLIM2-208ENST00000416159 FAM9AQ8IZU1 332 aaPredicted RBP29.49■■■□□ 2.31
PDLIM2-208ENST00000416159 KDM6BO15054 1643 aa29.48■■■□□ 2.31
PDLIM2-208ENST00000416159 EPRSP07814 1512 aaKnown RBP29.46■■■□□ 2.31
PDLIM2-208ENST00000416159 ABCA8O94911 1581 aa29.45■■■□□ 2.31
PDLIM2-208ENST00000416159 P3H3Q8IVL6 736 aa29.41■■■□□ 2.3
PDLIM2-208ENST00000416159 PPRC1Q5VV67 1664 aaKnown RBP29.38■■■□□ 2.29
PDLIM2-208ENST00000416159 WDR7Q9Y4E6 1490 aa29.38■■■□□ 2.29
PDLIM2-208ENST00000416159 MAP3K4Q9Y6R4 1608 aa29.34■■■□□ 2.29
PDLIM2-208ENST00000416159 SAMD9Q5K651 1589 aa29.32■■■□□ 2.28
PDLIM2-208ENST00000416159 TEX14Q8IWB6 1497 aa29.3■■■□□ 2.28
PDLIM2-208ENST00000416159 CHIC1Q5VXU3 224 aa29.3■■■□□ 2.28
PDLIM2-208ENST00000416159 KCNH8Q96L42 1107 aa29.29■■■□□ 2.28
PDLIM2-208ENST00000416159 KIF21BO75037 1637 aa29.25■■■□□ 2.27
PDLIM2-208ENST00000416159 RANGAP1P46060 587 aaPredicted RBP29.23■■■□□ 2.27
PDLIM2-208ENST00000416159 ATP10BO94823 1461 aa29.23■■■□□ 2.27
PDLIM2-208ENST00000416159 ARID3CA6NKF2 412 aa29.22■■■□□ 2.27
PDLIM2-208ENST00000416159 CD109Q6YHK3 1445 aa29.21■■■□□ 2.27
PDLIM2-208ENST00000416159 CFAP43Q8NDM7 1665 aa29.19■■■□□ 2.26
PDLIM2-208ENST00000416159 COL17A1Q9UMD9 1497 aaPredicted RBP29.19■■■□□ 2.26
PDLIM2-208ENST00000416159 RAPGEF6Q8TEU7 1601 aa29.18■■■□□ 2.26
PDLIM2-208ENST00000416159 MAGI3Q5TCQ9 1506 aa29.17■■■□□ 2.26
PDLIM2-208ENST00000416159 FHOD3Q2V2M9 1422 aa29.15■■■□□ 2.26
PDLIM2-208ENST00000416159 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.12■■■□□ 2.25
PDLIM2-208ENST00000416159 HNRNPUL2Q1KMD3 747 aaKnown RBP29.12■■■□□ 2.25
PDLIM2-208ENST00000416159 EFCAB5A4FU69 1503 aa29.1■■■□□ 2.25
PDLIM2-208ENST00000416159 KDM4FA0A1W2PPD8 638 aa29.1■■■□□ 2.25
PDLIM2-208ENST00000416159 UBTFP17480 764 aaKnown RBP29.1■■■□□ 2.25
PDLIM2-208ENST00000416159 NUP153P49790 1475 aaKnown RBP29.07■■■□□ 2.24
PDLIM2-208ENST00000416159 EHMT2Q96KQ7 1210 aa29.04■■■□□ 2.24
PDLIM2-208ENST00000416159 ABCA9Q8IUA7 1624 aa29■■■□□ 2.23
PDLIM2-208ENST00000416159 PLEKHD1A6NEE1 506 aa28.99■■■□□ 2.23
PDLIM2-208ENST00000416159 PHLDB1Q86UU1 1377 aa28.96■■■□□ 2.23
PDLIM2-208ENST00000416159 ARAP3Q8WWN8 1544 aa28.94■■■□□ 2.22
PDLIM2-208ENST00000416159 ADGRL1O94910 1474 aa28.91■■■□□ 2.22
PDLIM2-208ENST00000416159 FMN1Q68DA7 1419 aa28.88■■■□□ 2.21
PDLIM2-208ENST00000416159 NEO1Q92859 1461 aa28.87■■■□□ 2.21
PDLIM2-208ENST00000416159 ARHGAP35Q9NRY4 1499 aa28.87■■■□□ 2.21
PDLIM2-208ENST00000416159 ATP1B4Q9UN42 357 aaPredicted RBP28.81■■■□□ 2.2
PDLIM2-208ENST00000416159 CDK13Q14004 1512 aaKnown RBP28.79■■■□□ 2.2
PDLIM2-208ENST00000416159 RAPGEF3O95398 923 aa28.77■■■□□ 2.2
PDLIM2-208ENST00000416159 HECW1Q76N89 1606 aa28.76■■■□□ 2.2
PDLIM2-208ENST00000416159 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.76■■■□□ 2.19
PDLIM2-208ENST00000416159 CDK11AQ9UQ88 783 aaPredicted RBP28.74■■■□□ 2.19
PDLIM2-208ENST00000416159 AKNAQ7Z591 1439 aa28.7■■■□□ 2.19
PDLIM2-208ENST00000416159 FANCAO15360 1455 aa28.69■■■□□ 2.18
PDLIM2-208ENST00000416159 TTC37Q6PGP7 1564 aa28.68■■■□□ 2.18
PDLIM2-208ENST00000416159 CFAP74Q9C0B2 1584 aa28.67■■■□□ 2.18
PDLIM2-208ENST00000416159 DENND4BO75064 1496 aaPredicted RBP28.67■■■□□ 2.18
PDLIM2-208ENST00000416159 FRMPD1Q5SYB0 1578 aa28.64■■■□□ 2.18
PDLIM2-208ENST00000416159 PLCH2O75038 1416 aa28.63■■■□□ 2.17
PDLIM2-208ENST00000416159 TROQ12816 1431 aaPredicted RBP28.6■■■□□ 2.17
PDLIM2-208ENST00000416159 CASKIN1Q8WXD9 1431 aa28.58■■■□□ 2.17
PDLIM2-208ENST00000416159 RICTORQ6R327 1708 aa28.57■■■□□ 2.16
PDLIM2-208ENST00000416159 CLIP1P30622 1438 aa28.57■■■□□ 2.16
PDLIM2-208ENST00000416159 EFCAB2Q5VUJ9 269 aa28.56■■■□□ 2.16
PDLIM2-208ENST00000416159 LRRIQ1Q96JM4 1722 aa28.54■■■□□ 2.16
PDLIM2-208ENST00000416159 KIF14Q15058 1648 aa28.54■■■□□ 2.16
PDLIM2-208ENST00000416159 ARID4BQ4LE39 1312 aaPredicted RBP28.53■■■□□ 2.16
PDLIM2-208ENST00000416159 CCDC18Q5T9S5 1454 aa28.53■■■□□ 2.16
PDLIM2-208ENST00000416159 SCAPERQ9BY12 1400 aa28.52■■■□□ 2.16
PDLIM2-208ENST00000416159 MYO5CQ9NQX4 1742 aa28.52■■■□□ 2.16
PDLIM2-208ENST00000416159 PCF11O94913 1555 aaKnown RBP28.5■■■□□ 2.15
PDLIM2-208ENST00000416159 ARHGEF40Q8TER5 1519 aa28.5■■■□□ 2.15
PDLIM2-208ENST00000416159 ZMYM4Q5VZL5 1548 aa28.49■■■□□ 2.15
PDLIM2-208ENST00000416159 ADAMTSL3P82987 1691 aa28.48■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms