RNA–Protein interactions for RNA: ENST00000415997.1

APP-207, Transcript of amyloid beta precursor protein, humanhuman

TSL 3

Gene APP, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-207ENST00000415997 PLCD3Q8N3E9 789 aa8.09□□□□□ -1.11
APP-207ENST00000415997 POTEB2H3BUK9 544 aa8.06□□□□□ -1.12
APP-207ENST00000415997 FKBP8Q14318 412 aa8.05□□□□□ -1.12
APP-207ENST00000415997 CCDC61Q9Y6R9 512 aa8.05□□□□□ -1.12
APP-207ENST00000415997 RASEFQ8IZ41 740 aa8.04□□□□□ -1.12
APP-207ENST00000415997 ATMINO43313 823 aaPredicted RBP8.03□□□□□ -1.12
APP-207ENST00000415997 OTUD5Q96G74 571 aa8.03□□□□□ -1.12
APP-207ENST00000415997 METRNQ9UJH8 293 aa8.03□□□□□ -1.12
APP-207ENST00000415997 KIF12Q96FN5 646 aa8.02□□□□□ -1.13
APP-207ENST00000415997 MAP3K13O43283 966 aa8.01□□□□□ -1.13
APP-207ENST00000415997 ASTLQ6HA08 431 aaPredicted RBP8.01□□□□□ -1.13
APP-207ENST00000415997 ATN1P54259 1190 aaPredicted RBP8□□□□□ -1.13
APP-207ENST00000415997 SLC39A7Q92504 469 aa8□□□□□ -1.13
APP-207ENST00000415997 C7P10643 843 aa7.99□□□□□ -1.13
APP-207ENST00000415997 TRPC6Q9Y210 931 aa7.99□□□□□ -1.13
APP-207ENST00000415997 BMP2KQ9NSY1 1161 aaPredicted RBP7.96□□□□□ -1.14
APP-207ENST00000415997 DNAJC5Q9H3Z4 198 aa7.95□□□□□ -1.14
APP-207ENST00000415997 PLSCR2Q9NRY7 297 aa7.95□□□□□ -1.14
APP-207ENST00000415997 ZBTB47Q9UFB7 747 aaPredicted RBP7.95□□□□□ -1.14
APP-207ENST00000415997 POTEJP0CG39 1038 aa7.93□□□□□ -1.14
APP-207ENST00000415997 PCDHB13Q9Y5F0 798 aa7.93□□□□□ -1.14
APP-207ENST00000415997 NUBP1P53384 320 aa7.92□□□□□ -1.14
APP-207ENST00000415997 SEC24BO95487 1268 aa7.91□□□□□ -1.14
APP-207ENST00000415997 TIE1P35590 1138 aa7.9□□□□□ -1.14
APP-207ENST00000415997 DCAF8Q5TAQ9 597 aa7.9□□□□□ -1.14
APP-207ENST00000415997 MAMSTRQ6ZN01 415 aa7.9□□□□□ -1.14
APP-207ENST00000415997 FAM212AQ96EL1 285 aa7.9□□□□□ -1.14
APP-207ENST00000415997 TTLL13PA6NNM8 815 aa7.89□□□□□ -1.15
APP-207ENST00000415997 SCUBE2Q9NQ36 999 aa7.88□□□□□ -1.15
APP-207ENST00000415997 POTEMA6NI47 508 aa7.87□□□□□ -1.15
APP-207ENST00000415997 POTEFA5A3E0 1075 aa7.86□□□□□ -1.15
APP-207ENST00000415997 IFNL1Q8IU54 200 aa7.86□□□□□ -1.15
APP-207ENST00000415997 FAM163AQ96GL9 167 aaPredicted RBP7.86□□□□□ -1.15
APP-207ENST00000415997 TRIM35Q9UPQ4 493 aa7.86□□□□□ -1.15
APP-207ENST00000415997 COLQQ9Y215 455 aaPredicted RBP7.86□□□□□ -1.15
APP-207ENST00000415997 POTEGQ6S5H5 508 aa7.85□□□□□ -1.15
APP-207ENST00000415997 KLHL34Q8N239 644 aa7.85□□□□□ -1.15
APP-207ENST00000415997 FBXO3Q9UK99 471 aa7.85□□□□□ -1.15
APP-207ENST00000415997 PYGBP11216 843 aa7.84□□□□□ -1.15
APP-207ENST00000415997 SGIP1Q9BQI5 828 aa7.84□□□□□ -1.15
APP-207ENST00000415997 TMEM106CQ9BVX2 250 aa7.84□□□□□ -1.15
APP-207ENST00000415997 PCDHB8Q9UN66 801 aa7.79□□□□□ -1.16
APP-207ENST00000415997 PLCG2P16885 1265 aa7.77□□□□□ -1.17
APP-207ENST00000415997 IER5LQ5T953 404 aa7.77□□□□□ -1.17
APP-207ENST00000415997 VASPP50552 380 aaPredicted RBP7.76□□□□□ -1.17
APP-207ENST00000415997 SLAIN1Q8ND83 568 aa7.74□□□□□ -1.17
APP-207ENST00000415997 LCE2DQ5TA82 110 aaPredicted RBP7.72□□□□□ -1.17
APP-207ENST00000415997 GSE1Q14687 1217 aa7.71□□□□□ -1.18
APP-207ENST00000415997 IRX5P78411 483 aaPredicted RBP7.69□□□□□ -1.18
APP-207ENST00000415997 GOLGA2Q08379 1002 aa7.69□□□□□ -1.18
APP-207ENST00000415997 OCEL1Q9H607 264 aa7.69□□□□□ -1.18
APP-207ENST00000415997 CIZ1Q9ULV3 898 aaPredicted RBP7.68□□□□□ -1.18
APP-207ENST00000415997 ZNF467Q7Z7K2 595 aaPredicted RBP7.66□□□□□ -1.18
APP-207ENST00000415997 PCDH10Q9P2E7 1040 aa7.66□□□□□ -1.18
APP-207ENST00000415997 MKRN3Q13064 507 aaKnown RBP7.65□□□□□ -1.18
APP-207ENST00000415997 CCDC180Q9P1Z9 1646 aa7.63□□□□□ -1.19
APP-207ENST00000415997 PSEN1P49768 467 aa7.63□□□□□ -1.19
APP-207ENST00000415997 SPOCK2Q92563 424 aa7.63□□□□□ -1.19
APP-207ENST00000415997 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.63□□□□□ -1.19
APP-207ENST00000415997 ST18O60284 1047 aa7.62□□□□□ -1.19
APP-207ENST00000415997 IFNLR1Q8IU57 520 aaPredicted RBP7.62□□□□□ -1.19
APP-207ENST00000415997 CHRM1P11229 460 aaPredicted RBP7.6□□□□□ -1.19
APP-207ENST00000415997 CDAN1Q8IWY9 1227 aa7.6□□□□□ -1.19
APP-207ENST00000415997 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.6□□□□□ -1.193e-10■■□□□ 12.7
APP-207ENST00000415997 C3orf67Q6ZVT6 689 aa7.58□□□□□ -1.2
APP-207ENST00000415997 PDCD7Q8N8D1 485 aaKnown RBP7.57□□□□□ -1.2
APP-207ENST00000415997 PDAP1Q13442 181 aaKnown RBP7.56□□□□□ -1.2
APP-207ENST00000415997 L3MBTL3Q96JM7 780 aaPredicted RBP7.56□□□□□ -1.2
APP-207ENST00000415997 CABP2Q9NPB3 220 aa7.56□□□□□ -1.2
APP-207ENST00000415997 SNPHO15079 494 aa7.55□□□□□ -1.2
APP-207ENST00000415997 MARVELD3Q96A59 401 aa7.55□□□□□ -1.2
APP-207ENST00000415997 DPY19L2Q6NUT2 758 aa7.54□□□□□ -1.2
APP-207ENST00000415997 RB1CC1Q8TDY2 1594 aa7.52□□□□□ -1.21
APP-207ENST00000415997 G3V3G9 751 aa7.52□□□□□ -1.21
APP-207ENST00000415997 TMEM121BQ9BXQ6 578 aaPredicted RBP7.48□□□□□ -1.21
APP-207ENST00000415997 EMP3P54852 163 aa7.46□□□□□ -1.22
APP-207ENST00000415997 EFCAB3Q8N7B9 438 aa7.46□□□□□ -1.22
APP-207ENST00000415997 BOLA1Q9Y3E2 137 aa7.46□□□□□ -1.22
APP-207ENST00000415997 FAM205CA6NFA0 338 aa7.43□□□□□ -1.22
APP-207ENST00000415997 ILDR1Q86SU0 546 aaPredicted RBP7.42□□□□□ -1.22
APP-207ENST00000415997 TRIM41Q8WV44 630 aa7.42□□□□□ -1.22
APP-207ENST00000415997 CECR2Q9BXF3 1484 aa7.42□□□□□ -1.22
APP-207ENST00000415997 SPNS2Q8IVW8 549 aa7.4□□□□□ -1.22
APP-207ENST00000415997 ZNF710Q8N1W2 664 aa7.4□□□□□ -1.22
APP-207ENST00000415997 BICRAQ9NZM4 1560 aa7.39□□□□□ -1.23
APP-207ENST00000415997 HS3ST6Q96QI5 342 aa7.39□□□□□ -1.23
APP-207ENST00000415997 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.38□□□□□ -1.23
APP-207ENST00000415997 POTEB3A0JP26 581 aa7.38□□□□□ -1.23
APP-207ENST00000415997 RIOK3O14730 519 aaKnown RBP7.38□□□□□ -1.23
APP-207ENST00000415997 MMRN1Q13201 1228 aa7.38□□□□□ -1.23
APP-207ENST00000415997 POTEBQ6S5H4 581 aa7.38□□□□□ -1.23
APP-207ENST00000415997 ZFP91Q96JP5 570 aaPredicted RBP7.38□□□□□ -1.23
APP-207ENST00000415997 RNF25Q96BH1 459 aaPredicted RBP7.36□□□□□ -1.23
APP-207ENST00000415997 NACADO15069 1562 aa7.36□□□□□ -1.23
APP-207ENST00000415997 CC2D2AQ9P2K1 1620 aa7.35□□□□□ -1.23
APP-207ENST00000415997 HOXB3P14651 431 aaPredicted RBP7.35□□□□□ -1.23
APP-207ENST00000415997 VGFO15240 615 aaPredicted RBP7.34□□□□□ -1.23
APP-207ENST00000415997 DOK7Q18PE1 504 aa7.34□□□□□ -1.23
APP-207ENST00000415997 PHF8Q9UPP1 1060 aa7.34□□□□□ -1.23
APP-207ENST00000415997 UNC13AQ9UPW8 1703 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms