RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 SNAPC4Q5SXM2 1469 aa18.03■□□□□ 0.48
RFFL-205ENST00000415395 EFCAB5A4FU69 1503 aa18.01■□□□□ 0.47
RFFL-205ENST00000415395 ARAP1Q96P48 1450 aa18■□□□□ 0.47
RFFL-205ENST00000415395 ARHGAP35Q9NRY4 1499 aa18■□□□□ 0.47
RFFL-205ENST00000415395 ZEB1P37275 1124 aaPredicted RBP17.98■□□□□ 0.47
RFFL-205ENST00000415395 SYNJ2O15056 1496 aa17.97■□□□□ 0.47
RFFL-205ENST00000415395 GRIN2AQ12879 1464 aa17.95■□□□□ 0.46
RFFL-205ENST00000415395 IQGAP2Q13576 1575 aa17.93■□□□□ 0.46
RFFL-205ENST00000415395 SAMD9Q5K651 1589 aa17.92■□□□□ 0.46
RFFL-205ENST00000415395 RANGAP1P46060 587 aaPredicted RBP17.92■□□□□ 0.46
RFFL-205ENST00000415395 KIAA0586Q9BVV6 1533 aa17.88■□□□□ 0.45
RFFL-205ENST00000415395 UGGT2Q9NYU1 1516 aa17.85■□□□□ 0.45
RFFL-205ENST00000415395 PPARGC1BQ86YN6 1023 aaKnown RBP17.84■□□□□ 0.45
RFFL-205ENST00000415395 CHMP7Q8WUX9 453 aaPredicted RBP17.84■□□□□ 0.45
RFFL-205ENST00000415395 NUP160Q12769 1436 aa17.84■□□□□ 0.45
RFFL-205ENST00000415395 CEP170Q5SW79 1584 aa17.83■□□□□ 0.44
RFFL-205ENST00000415395 APLP2Q06481 763 aa17.81■□□□□ 0.44
RFFL-205ENST00000415395 MAP3K1Q13233 1512 aa17.81■□□□□ 0.44
RFFL-205ENST00000415395 FMN1Q68DA7 1419 aa17.81■□□□□ 0.44
RFFL-205ENST00000415395 FHOD3Q2V2M9 1422 aa17.8■□□□□ 0.44
RFFL-205ENST00000415395 CHD1O14646 1710 aa17.78■□□□□ 0.44
RFFL-205ENST00000415395 FYCO1Q9BQS8 1478 aa17.77■□□□□ 0.44
RFFL-205ENST00000415395 PCF11O94913 1555 aaKnown RBP17.76■□□□□ 0.43
RFFL-205ENST00000415395 CASKIN1Q8WXD9 1431 aa17.75■□□□□ 0.43
RFFL-205ENST00000415395 KIAA0556O60303 1618 aa17.74■□□□□ 0.43
RFFL-205ENST00000415395 CFAP43Q8NDM7 1665 aa17.73■□□□□ 0.43
RFFL-205ENST00000415395 FBLN2P98095 1184 aa17.72■□□□□ 0.43
RFFL-205ENST00000415395 TIAM1Q13009 1591 aa17.72■□□□□ 0.43
RFFL-205ENST00000415395 DISP1Q96F81 1524 aa17.71■□□□□ 0.43
RFFL-205ENST00000415395 P3H3Q8IVL6 736 aa17.71■□□□□ 0.43
RFFL-205ENST00000415395 CARMIL2Q6F5E8 1435 aa17.66■□□□□ 0.42
RFFL-205ENST00000415395 HECW1Q76N89 1606 aa17.65■□□□□ 0.42
RFFL-205ENST00000415395 SHROOM2Q13796 1616 aa17.64■□□□□ 0.41
RFFL-205ENST00000415395 JPH4Q96JJ6 628 aa17.63■□□□□ 0.41
RFFL-205ENST00000415395 CCDC18Q5T9S5 1454 aa17.61■□□□□ 0.41
RFFL-205ENST00000415395 LRRC9Q6ZRR7 1453 aa17.61■□□□□ 0.41
RFFL-205ENST00000415395 LRRIQ1Q96JM4 1722 aa17.61■□□□□ 0.41
RFFL-205ENST00000415395 CLASP1Q7Z460 1538 aa17.59■□□□□ 0.41
RFFL-205ENST00000415395 KANK4Q5T7N3 995 aaPredicted RBP17.58■□□□□ 0.41
RFFL-205ENST00000415395 RAPGEF6Q8TEU7 1601 aa17.57■□□□□ 0.4
RFFL-205ENST00000415395 TTBK1Q5TCY1 1321 aaPredicted RBP17.56■□□□□ 0.4
RFFL-205ENST00000415395 PRG4Q92954 1404 aaPredicted RBP17.53■□□□□ 0.4
RFFL-205ENST00000415395 EPRSP07814 1512 aaKnown RBP17.53■□□□□ 0.4
RFFL-205ENST00000415395 ATP1B4Q9UN42 357 aaPredicted RBP17.52■□□□□ 0.4
RFFL-205ENST00000415395 EHBP1L1Q8N3D4 1523 aa17.52■□□□□ 0.4
RFFL-205ENST00000415395 RRBP1Q9P2E9 1410 aaKnown RBP17.51■□□□□ 0.39
RFFL-205ENST00000415395 ABCA8O94911 1581 aa17.49■□□□□ 0.39
RFFL-205ENST00000415395 NUP153P49790 1475 aaKnown RBP17.48■□□□□ 0.39
RFFL-205ENST00000415395 SUPT6HQ7KZ85 1726 aaKnown RBP17.48■□□□□ 0.39
RFFL-205ENST00000415395 MTUS2Q5JR59 1369 aa17.47■□□□□ 0.39
RFFL-205ENST00000415395 PLB1Q6P1J6 1458 aa17.44■□□□□ 0.38
RFFL-205ENST00000415395 CDK13Q14004 1512 aaKnown RBP17.43■□□□□ 0.38
RFFL-205ENST00000415395 PTPRGP23470 1445 aa17.43■□□□□ 0.38
RFFL-205ENST00000415395 CCNB3Q8WWL7 1395 aa17.42■□□□□ 0.38
RFFL-205ENST00000415395 ARHGEF11O15085 1522 aa17.41■□□□□ 0.38
RFFL-205ENST00000415395 MAGI3Q5TCQ9 1506 aa17.41■□□□□ 0.38
RFFL-205ENST00000415395 PHLDB1Q86UU1 1377 aa17.39■□□□□ 0.38
RFFL-205ENST00000415395 ERCC6L2Q5T890 1561 aa17.39■□□□□ 0.37
RFFL-205ENST00000415395 NCOA2Q15596 1464 aa17.38■□□□□ 0.37
RFFL-205ENST00000415395 CDK11AQ9UQ88 783 aaPredicted RBP17.38■□□□□ 0.37
RFFL-205ENST00000415395 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.37■□□□□ 0.37
RFFL-205ENST00000415395 UACAQ9BZF9 1416 aa17.36■□□□□ 0.37
RFFL-205ENST00000415395 OSCARQ8IYS5 282 aa17.35■□□□□ 0.37
RFFL-205ENST00000415395 ADCY10Q96PN6 1610 aa17.35■□□□□ 0.37
RFFL-205ENST00000415395 MYOM3Q5VTT5 1437 aa17.34■□□□□ 0.37
RFFL-205ENST00000415395 PELP1Q8IZL8 1130 aaKnown RBP17.34■□□□□ 0.37
RFFL-205ENST00000415395 ABCC2Q92887 1545 aa17.34■□□□□ 0.37
RFFL-205ENST00000415395 TROQ12816 1431 aaPredicted RBP17.33■□□□□ 0.37
RFFL-205ENST00000415395 FGD6Q6ZV73 1430 aa17.33■□□□□ 0.36
RFFL-205ENST00000415395 UHRF1BP1LA0JNW5 1464 aa17.32■□□□□ 0.36
RFFL-205ENST00000415395 ATP10BO94823 1461 aa17.32■□□□□ 0.36
RFFL-205ENST00000415395 MIA2Q96PC5 1412 aa17.29■□□□□ 0.36
RFFL-205ENST00000415395 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.27■□□□□ 0.36
RFFL-205ENST00000415395 HNRNPUL2Q1KMD3 747 aaKnown RBP17.27■□□□□ 0.36
RFFL-205ENST00000415395 CCER1Q8TC90 406 aaPredicted RBP17.27■□□□□ 0.36
RFFL-205ENST00000415395 ITSN2Q9NZM3 1697 aa17.27■□□□□ 0.35
RFFL-205ENST00000415395 PTPN23Q9H3S7 1636 aa17.26■□□□□ 0.35
RFFL-205ENST00000415395 KIF14Q15058 1648 aa17.26■□□□□ 0.35
RFFL-205ENST00000415395 TCOF1Q13428 1488 aaKnown RBP17.26■□□□□ 0.35
RFFL-205ENST00000415395 ARID3CA6NKF2 412 aa17.25■□□□□ 0.35
RFFL-205ENST00000415395 PLEKHD1A6NEE1 506 aa17.24■□□□□ 0.35
RFFL-205ENST00000415395 KDM5BQ9UGL1 1544 aa17.23■□□□□ 0.35
RFFL-205ENST00000415395 ZCCHC11Q5TAX3 1644 aaKnown RBP17.21■□□□□ 0.35
RFFL-205ENST00000415395 FAM50AQ14320 339 aaKnown RBP17.21■□□□□ 0.35
RFFL-205ENST00000415395 ABCC10Q5T3U5 1492 aa17.18■□□□□ 0.34
RFFL-205ENST00000415395 CDC42BPAQ5VT25 1732 aa17.17■□□□□ 0.34
RFFL-205ENST00000415395 GPATCH8Q9UKJ3 1502 aaKnown RBP17.15■□□□□ 0.34
RFFL-205ENST00000415395 DNMT1P26358 1616 aaKnown RBP17.11■□□□□ 0.33
RFFL-205ENST00000415395 PREX2Q70Z35 1606 aa17.11■□□□□ 0.33
RFFL-205ENST00000415395 SETD5Q9C0A6 1442 aa17.11■□□□□ 0.33
RFFL-205ENST00000415395 ITGAEP38570 1179 aa17.1■□□□□ 0.33
RFFL-205ENST00000415395 AKNAQ7Z591 1439 aa17.1■□□□□ 0.33
RFFL-205ENST00000415395 CAMSAP2Q08AD1 1489 aa17.08■□□□□ 0.33
RFFL-205ENST00000415395 MYO5CQ9NQX4 1742 aa17.08■□□□□ 0.33
RFFL-205ENST00000415395 CFDP1Q9UEE9 299 aaPredicted RBP17.08■□□□□ 0.32
RFFL-205ENST00000415395 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.08■□□□□ 0.32
RFFL-205ENST00000415395 CDC42BPBQ9Y5S2 1711 aa17.07■□□□□ 0.32
RFFL-205ENST00000415395 HFM1A2PYH4 1435 aa17.07■□□□□ 0.32
RFFL-205ENST00000415395 TTC37Q6PGP7 1564 aa17.06■□□□□ 0.32
RFFL-205ENST00000415395 PTPRKQ15262 1439 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms