RNA–Protein interactions for RNA: ENST00000415356.1

AC007349.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC007349.3, Length 872 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007349.3-201ENST00000415356 SHROOM2Q13796 1616 aa13.35□□□□□ -0.27
AC007349.3-201ENST00000415356 BIVM-ERCC5R4GMW8 1640 aa13.29□□□□□ -0.28
AC007349.3-201ENST00000415356 FHAD1B1AJZ9 1412 aa13.28□□□□□ -0.28
AC007349.3-201ENST00000415356 WRNQ14191 1432 aaPredicted RBP eCLIP13.28□□□□□ -0.28
AC007349.3-201ENST00000415356 TOP2BQ02880 1626 aa13.27□□□□□ -0.29
AC007349.3-201ENST00000415356 SUPT5HO00267 1087 aaKnown RBP13.26□□□□□ -0.29
AC007349.3-201ENST00000415356 PRG4Q92954 1404 aaPredicted RBP13.26□□□□□ -0.29
AC007349.3-201ENST00000415356 JPH4Q96JJ6 628 aa13.22□□□□□ -0.29
AC007349.3-201ENST00000415356 TSPOAP1O95153 1857 aa13.22□□□□□ -0.29
AC007349.3-201ENST00000415356 ERICH3Q5RHP9 1530 aa13.22□□□□□ -0.29
AC007349.3-201ENST00000415356 FAM69CQ0P6D2 419 aa13.21□□□□□ -0.29
AC007349.3-201ENST00000415356 RUSC2Q8N2Y8 1516 aa13.21□□□□□ -0.29
AC007349.3-201ENST00000415356 ADCY10Q96PN6 1610 aa13.21□□□□□ -0.3
AC007349.3-201ENST00000415356 ABCC10Q5T3U5 1492 aa13.2□□□□□ -0.3
AC007349.3-201ENST00000415356 DIP2BQ9P265 1576 aa13.2□□□□□ -0.3
AC007349.3-201ENST00000415356 KDM4FA0A1W2PPD8 638 aa13.19□□□□□ -0.3
AC007349.3-201ENST00000415356 MAPKBP1O60336 1514 aa13.14□□□□□ -0.31
AC007349.3-201ENST00000415356 KDM6BO15054 1643 aa13.13□□□□□ -0.31
AC007349.3-201ENST00000415356 NPM1P06748 294 aaKnown RBP eCLIP13.08□□□□□ -0.32
AC007349.3-201ENST00000415356 PPP6R1Q9UPN7 881 aa13.08□□□□□ -0.32
AC007349.3-201ENST00000415356 TTBK1Q5TCY1 1321 aaPredicted RBP13.08□□□□□ -0.32
AC007349.3-201ENST00000415356 PPRC1Q5VV67 1664 aaKnown RBP13.07□□□□□ -0.32
AC007349.3-201ENST00000415356 IGF1RP08069 1367 aa13.05□□□□□ -0.32
AC007349.3-201ENST00000415356 KIAA0586Q9BVV6 1533 aa13.04□□□□□ -0.32
AC007349.3-201ENST00000415356 CUL7Q14999 1698 aa13□□□□□ -0.33
AC007349.3-201ENST00000415356 COL17A1Q9UMD9 1497 aaPredicted RBP13□□□□□ -0.33
AC007349.3-201ENST00000415356 PTPRGP23470 1445 aa12.99□□□□□ -0.33
AC007349.3-201ENST00000415356 ADGRL1O94910 1474 aa12.97□□□□□ -0.33
AC007349.3-201ENST00000415356 ASXL2Q76L83 1435 aa12.97□□□□□ -0.33
AC007349.3-201ENST00000415356 ADRA2BP18089 450 aa12.96□□□□□ -0.33
AC007349.3-201ENST00000415356 ABCC2Q92887 1545 aa12.96□□□□□ -0.33
AC007349.3-201ENST00000415356 KIF27Q86VH2 1401 aa12.95□□□□□ -0.34
AC007349.3-201ENST00000415356 GLI2P10070 1586 aa12.94□□□□□ -0.34
AC007349.3-201ENST00000415356 CARMIL1Q5VZK9 1371 aa12.94□□□□□ -0.34
AC007349.3-201ENST00000415356 TNIKQ9UKE5 1360 aa12.93□□□□□ -0.34
AC007349.3-201ENST00000415356 DISP1Q96F81 1524 aa12.92□□□□□ -0.34
AC007349.3-201ENST00000415356 IQGAP2Q13576 1575 aa12.91□□□□□ -0.34
AC007349.3-201ENST00000415356 HECW2Q9P2P5 1572 aa12.9□□□□□ -0.34
AC007349.3-201ENST00000415356 MAP3K4Q9Y6R4 1608 aa12.9□□□□□ -0.34
AC007349.3-201ENST00000415356 PLB1Q6P1J6 1458 aa12.9□□□□□ -0.34
AC007349.3-201ENST00000415356 EPRSP07814 1512 aaKnown RBP12.89□□□□□ -0.35
AC007349.3-201ENST00000415356 ZCCHC11Q5TAX3 1644 aaKnown RBP12.89□□□□□ -0.35
AC007349.3-201ENST00000415356 UHRF1BP1LA0JNW5 1464 aa12.89□□□□□ -0.35
AC007349.3-201ENST00000415356 UACAQ9BZF9 1416 aa12.88□□□□□ -0.35
AC007349.3-201ENST00000415356 CARMIL2Q6F5E8 1435 aa12.87□□□□□ -0.35
AC007349.3-201ENST00000415356 KDM5BQ9UGL1 1544 aa12.86□□□□□ -0.35
AC007349.3-201ENST00000415356 KIAA0556O60303 1618 aa12.82□□□□□ -0.36
AC007349.3-201ENST00000415356 UGGT2Q9NYU1 1516 aa12.81□□□□□ -0.36
AC007349.3-201ENST00000415356 KIF21BO75037 1637 aa12.78□□□□□ -0.36
AC007349.3-201ENST00000415356 TEX14Q8IWB6 1497 aa12.78□□□□□ -0.36
AC007349.3-201ENST00000415356 WDR7Q9Y4E6 1490 aa12.78□□□□□ -0.36
AC007349.3-201ENST00000415356 RAPGEF2Q9Y4G8 1499 aa12.76□□□□□ -0.37
AC007349.3-201ENST00000415356 KCNH8Q96L42 1107 aa12.75□□□□□ -0.37
AC007349.3-201ENST00000415356 LMTK3Q96Q04 1460 aa12.73□□□□□ -0.37
AC007349.3-201ENST00000415356 CD109Q6YHK3 1445 aa12.73□□□□□ -0.37
AC007349.3-201ENST00000415356 POTEHQ6S545 545 aa12.73□□□□□ -0.37
AC007349.3-201ENST00000415356 CFAP43Q8NDM7 1665 aa12.73□□□□□ -0.37
AC007349.3-201ENST00000415356 CTTNBP2Q8WZ74 1663 aa12.73□□□□□ -0.37
AC007349.3-201ENST00000415356 ABCA8O94911 1581 aa12.73□□□□□ -0.37
AC007349.3-201ENST00000415356 ARID3CA6NKF2 412 aa12.72□□□□□ -0.37
AC007349.3-201ENST00000415356 MAGI3Q5TCQ9 1506 aa12.72□□□□□ -0.37
AC007349.3-201ENST00000415356 ADAMTSL3P82987 1691 aa12.65□□□□□ -0.38
AC007349.3-201ENST00000415356 SOCS7O14512 581 aa12.65□□□□□ -0.38
AC007349.3-201ENST00000415356 P3H3Q8IVL6 736 aa12.64□□□□□ -0.39
AC007349.3-201ENST00000415356 RAPGEF3O95398 923 aa12.63□□□□□ -0.39
AC007349.3-201ENST00000415356 PTPRMP28827 1452 aa12.63□□□□□ -0.39
AC007349.3-201ENST00000415356 ARAP3Q8WWN8 1544 aa12.62□□□□□ -0.39
AC007349.3-201ENST00000415356 ATP10BO94823 1461 aa12.62□□□□□ -0.39
AC007349.3-201ENST00000415356 FBXO41Q8TF61 875 aa12.62□□□□□ -0.39
AC007349.3-201ENST00000415356 FRMPD1Q5SYB0 1578 aa12.61□□□□□ -0.39
AC007349.3-201ENST00000415356 MADDQ8WXG6 1647 aa12.61□□□□□ -0.39
AC007349.3-201ENST00000415356 GOLGA3Q08378 1498 aa12.6□□□□□ -0.39
AC007349.3-201ENST00000415356 PLPPR3Q6T4P5 718 aa12.6□□□□□ -0.39
AC007349.3-201ENST00000415356 BCORL1Q5H9F3 1711 aa12.59□□□□□ -0.39
AC007349.3-201ENST00000415356 ABCA9Q8IUA7 1624 aa12.59□□□□□ -0.39
AC007349.3-201ENST00000415356 PRXQ9BXM0 1461 aa12.59□□□□□ -0.39
AC007349.3-201ENST00000415356 SIGLEC1Q9BZZ2 1709 aa12.57□□□□□ -0.4
AC007349.3-201ENST00000415356 RIMS1Q86UR5 1692 aaKnown RBP12.55□□□□□ -0.4
AC007349.3-201ENST00000415356 PCF11O94913 1555 aaKnown RBP12.55□□□□□ -0.4
AC007349.3-201ENST00000415356 HSPA2P54652 639 aa12.53□□□□□ -0.4
AC007349.3-201ENST00000415356 SAMD9Q5K651 1589 aa12.52□□□□□ -0.4
AC007349.3-201ENST00000415356 RAPGEF6Q8TEU7 1601 aa12.52□□□□□ -0.4
AC007349.3-201ENST00000415356 ILDR2Q71H61 639 aa12.52□□□□□ -0.41
AC007349.3-201ENST00000415356 RICTORQ6R327 1708 aa12.51□□□□□ -0.41
AC007349.3-201ENST00000415356 ARID4BQ4LE39 1312 aaPredicted RBP12.51□□□□□ -0.41
AC007349.3-201ENST00000415356 RANGAP1P46060 587 aaPredicted RBP12.5□□□□□ -0.41
AC007349.3-201ENST00000415356 NUP153P49790 1475 aaKnown RBP12.5□□□□□ -0.41
AC007349.3-201ENST00000415356 NEO1Q92859 1461 aa12.5□□□□□ -0.41
AC007349.3-201ENST00000415356 ARHGEF40Q8TER5 1519 aa12.49□□□□□ -0.41
AC007349.3-201ENST00000415356 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.48□□□□□ -0.41
AC007349.3-201ENST00000415356 HNRNPUL2Q1KMD3 747 aaKnown RBP12.48□□□□□ -0.41
AC007349.3-201ENST00000415356 FHOD3Q2V2M9 1422 aa12.46□□□□□ -0.41
AC007349.3-201ENST00000415356 YEATS2Q9ULM3 1422 aa12.46□□□□□ -0.41
AC007349.3-201ENST00000415356 PHLDB1Q86UU1 1377 aa12.46□□□□□ -0.41
AC007349.3-201ENST00000415356 TTC37Q6PGP7 1564 aa12.45□□□□□ -0.42
AC007349.3-201ENST00000415356 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.44□□□□□ -0.42
AC007349.3-201ENST00000415356 MLECQ14165 292 aa12.44□□□□□ -0.42
AC007349.3-201ENST00000415356 DENND4BO75064 1496 aaPredicted RBP12.44□□□□□ -0.42
AC007349.3-201ENST00000415356 AKNAQ7Z591 1439 aa12.44□□□□□ -0.42
AC007349.3-201ENST00000415356 FER1L4A9Z1Z3 1794 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms