RNA–Protein interactions for RNA: ENST00000414790.5

H19-204, H19, imprinted maternally expressed transcript, humanhuman

TSL 1 (best)

Gene H19, Length 2,361 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H19-204ENST00000414790 IFT140Q96RY7 1462 aa31.13■■■□□ 2.57
H19-204ENST00000414790 CTTNBP2Q8WZ74 1663 aa31.11■■■□□ 2.57
H19-204ENST00000414790 KANK4Q5T7N3 995 aaPredicted RBP31.07■■■□□ 2.56
H19-204ENST00000414790 GRIN2BQ13224 1484 aa31.02■■■□□ 2.56
H19-204ENST00000414790 FHOD3Q2V2M9 1422 aa31■■■□□ 2.55
H19-204ENST00000414790 FHAD1B1AJZ9 1412 aa30.99■■■□□ 2.55
H19-204ENST00000414790 ADAMTS12P58397 1594 aa30.97■■■□□ 2.55
H19-204ENST00000414790 EIF4G3O43432 1585 aaKnown RBP30.94■■■□□ 2.54
H19-204ENST00000414790 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.92■■■□□ 2.54
H19-204ENST00000414790 EFCAB5A4FU69 1503 aa30.9■■■□□ 2.54
H19-204ENST00000414790 ATP1B4Q9UN42 357 aaPredicted RBP30.88■■■□□ 2.53
H19-204ENST00000414790 SNAPC4Q5SXM2 1469 aa30.87■■■□□ 2.53
H19-204ENST00000414790 PCF11O94913 1555 aaKnown RBP30.86■■■□□ 2.53
H19-204ENST00000414790 HNRNPUL2Q1KMD3 747 aaKnown RBP30.85■■■□□ 2.53
H19-204ENST00000414790 TIAM1Q13009 1591 aa30.79■■■□□ 2.52
H19-204ENST00000414790 SAMD9Q5K651 1589 aa30.79■■■□□ 2.52
H19-204ENST00000414790 CCER1Q8TC90 406 aaPredicted RBP30.74■■■□□ 2.51
H19-204ENST00000414790 IQGAP2Q13576 1575 aa30.73■■■□□ 2.51
H19-204ENST00000414790 ZEB1P37275 1124 aaPredicted RBP30.73■■■□□ 2.51
H19-204ENST00000414790 CASKIN1Q8WXD9 1431 aa30.7■■■□□ 2.51
H19-204ENST00000414790 MAP3K1Q13233 1512 aa30.7■■■□□ 2.51
H19-204ENST00000414790 FMN1Q68DA7 1419 aa30.69■■■□□ 2.5
H19-204ENST00000414790 FYCO1Q9BQS8 1478 aa30.69■■■□□ 2.5
H19-204ENST00000414790 GRIN2AQ12879 1464 aa30.69■■■□□ 2.5
H19-204ENST00000414790 FBLN2P98095 1184 aa30.68■■■□□ 2.5
H19-204ENST00000414790 LRRC9Q6ZRR7 1453 aa30.67■■■□□ 2.5
H19-204ENST00000414790 CHMP7Q8WUX9 453 aaPredicted RBP30.66■■■□□ 2.5
H19-204ENST00000414790 MAGI1Q96QZ7 1491 aaPredicted RBP30.66■■■□□ 2.5
H19-204ENST00000414790 CFAP43Q8NDM7 1665 aa30.65■■■□□ 2.5
H19-204ENST00000414790 SYNJ2O15056 1496 aa30.59■■■□□ 2.49
H19-204ENST00000414790 RRBP1Q9P2E9 1410 aaKnown RBP30.59■■■□□ 2.49
H19-204ENST00000414790 KIAA0586Q9BVV6 1533 aa30.57■■■□□ 2.49
H19-204ENST00000414790 LRRIQ1Q96JM4 1722 aa30.55■■■□□ 2.48
H19-204ENST00000414790 UGGT2Q9NYU1 1516 aa30.53■■■□□ 2.48
H19-204ENST00000414790 CEP170Q5SW79 1584 aa30.53■■■□□ 2.48
H19-204ENST00000414790 PHLDB1Q86UU1 1377 aa30.53■■■□□ 2.48
H19-204ENST00000414790 CCNB3Q8WWL7 1395 aa30.53■■■□□ 2.48
H19-204ENST00000414790 ITGAEP38570 1179 aa30.48■■■□□ 2.47
H19-204ENST00000414790 DISP1Q96F81 1524 aa30.46■■■□□ 2.47
H19-204ENST00000414790 ARID3CA6NKF2 412 aa30.42■■■□□ 2.46
H19-204ENST00000414790 KIAA0556O60303 1618 aa30.42■■■□□ 2.46
H19-204ENST00000414790 MTUS2Q5JR59 1369 aa30.4■■■□□ 2.46
H19-204ENST00000414790 NUP160Q12769 1436 aa30.39■■■□□ 2.46
H19-204ENST00000414790 FAM50AQ14320 339 aaKnown RBP30.35■■■□□ 2.45
H19-204ENST00000414790 HECW1Q76N89 1606 aa30.33■■■□□ 2.45
H19-204ENST00000414790 JPH4Q96JJ6 628 aa30.33■■■□□ 2.45
H19-204ENST00000414790 MAGI3Q5TCQ9 1506 aa30.31■■■□□ 2.44
H19-204ENST00000414790 CDK13Q14004 1512 aaKnown RBP30.3■■■□□ 2.44
H19-204ENST00000414790 EPRSP07814 1512 aaKnown RBP30.29■■■□□ 2.44
H19-204ENST00000414790 CCDC18Q5T9S5 1454 aa30.27■■■□□ 2.44
H19-204ENST00000414790 NCOA2Q15596 1464 aa30.23■■■□□ 2.43
H19-204ENST00000414790 CHD1O14646 1710 aa30.23■■■□□ 2.43
H19-204ENST00000414790 EHBP1L1Q8N3D4 1523 aa30.22■■■□□ 2.43
H19-204ENST00000414790 SUPT6HQ7KZ85 1726 aaKnown RBP30.19■■■□□ 2.42
H19-204ENST00000414790 RAPGEF6Q8TEU7 1601 aa30.18■■■□□ 2.42
H19-204ENST00000414790 FGD6Q6ZV73 1430 aa30.18■■■□□ 2.42
H19-204ENST00000414790 CARMIL2Q6F5E8 1435 aa30.17■■■□□ 2.42
H19-204ENST00000414790 NUP153P49790 1475 aaKnown RBP30.17■■■□□ 2.42
H19-204ENST00000414790 PLB1Q6P1J6 1458 aa30.16■■■□□ 2.42
H19-204ENST00000414790 MYOM3Q5VTT5 1437 aa30.11■■■□□ 2.41
H19-204ENST00000414790 DHX57Q6P158 1386 aaKnown RBP30.11■■■□□ 2.41
H19-204ENST00000414790 ARHGEF11O15085 1522 aa30.09■■■□□ 2.41
H19-204ENST00000414790 RAB3GAP2Q9H2M9 1393 aa30.08■■■□□ 2.41
H19-204ENST00000414790 PRG4Q92954 1404 aaPredicted RBP30.07■■■□□ 2.4
H19-204ENST00000414790 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.05■■■□□ 2.4
H19-204ENST00000414790 SETD5Q9C0A6 1442 aa30.02■■■□□ 2.4
H19-204ENST00000414790 PTPRKQ15262 1439 aa29.98■■■□□ 2.39
H19-204ENST00000414790 PTPN23Q9H3S7 1636 aa29.98■■■□□ 2.39
H19-204ENST00000414790 CDK11AQ9UQ88 783 aaPredicted RBP29.93■■■□□ 2.38
H19-204ENST00000414790 ABCA8O94911 1581 aa29.93■■■□□ 2.38
H19-204ENST00000414790 PTPRGP23470 1445 aa29.92■■■□□ 2.38
H19-204ENST00000414790 ERCC6L2Q5T890 1561 aa29.9■■■□□ 2.38
H19-204ENST00000414790 SHROOM2Q13796 1616 aa29.89■■■□□ 2.37
H19-204ENST00000414790 TROQ12816 1431 aaPredicted RBP29.86■■■□□ 2.37
H19-204ENST00000414790 TCOF1Q13428 1488 aaKnown RBP29.85■■■□□ 2.37
H19-204ENST00000414790 CLSPNQ9HAW4 1339 aa29.85■■■□□ 2.37
H19-204ENST00000414790 ATP10BO94823 1461 aa29.84■■■□□ 2.37
H19-204ENST00000414790 CHIC2Q9UKJ5 165 aa29.83■■■□□ 2.37
H19-204ENST00000414790 MIA2Q96PC5 1412 aa29.81■■■□□ 2.36
H19-204ENST00000414790 KIF14Q15058 1648 aa29.81■■■□□ 2.36
H19-204ENST00000414790 ZNF644Q9H582 1327 aaPredicted RBP29.81■■■□□ 2.36
H19-204ENST00000414790 CLASP1Q7Z460 1538 aa29.78■■■□□ 2.36
H19-204ENST00000414790 MAPKBP1O60336 1514 aa29.77■■■□□ 2.36
H19-204ENST00000414790 PLEKHD1A6NEE1 506 aa29.76■■■□□ 2.36
H19-204ENST00000414790 RRP7BPQ9NSQ0 103 aa29.76■■■□□ 2.35
H19-204ENST00000414790 HFM1A2PYH4 1435 aa29.76■■■□□ 2.35
H19-204ENST00000414790 NAIPQ13075 1403 aa29.73■■■□□ 2.35
H19-204ENST00000414790 UACAQ9BZF9 1416 aa29.71■■■□□ 2.35
H19-204ENST00000414790 ADCY10Q96PN6 1610 aa29.7■■■□□ 2.35
H19-204ENST00000414790 GPATCH8Q9UKJ3 1502 aaKnown RBP29.69■■■□□ 2.34
H19-204ENST00000414790 CFDP1Q9UEE9 299 aaPredicted RBP29.68■■■□□ 2.34
H19-204ENST00000414790 ZNF777Q9ULD5 760 aaPredicted RBP29.67■■■□□ 2.34
H19-204ENST00000414790 DIEXFQ68CQ4 756 aaKnown RBP29.64■■■□□ 2.34
H19-204ENST00000414790 SIN3AQ96ST3 1273 aa29.63■■■□□ 2.33
H19-204ENST00000414790 DAPK1P53355 1430 aa29.63■■■□□ 2.33
H19-204ENST00000414790 ABCC5O15440 1437 aa29.61■■■□□ 2.33
H19-204ENST00000414790 ITSN2Q9NZM3 1697 aa29.61■■■□□ 2.33
H19-204ENST00000414790 CAMSAP2Q08AD1 1489 aa29.6■■■□□ 2.33
H19-204ENST00000414790 ZNF316A6NFI3 1004 aaPredicted RBP29.6■■■□□ 2.33
H19-204ENST00000414790 ABCC10Q5T3U5 1492 aa29.59■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms