RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 ERCC6L2Q5T890 1561 aa18.99■□□□□ 0.63
RFFL-204ENST00000414419 PRG4Q92954 1404 aaPredicted RBP18.97■□□□□ 0.63
RFFL-204ENST00000414419 KIAA0586Q9BVV6 1533 aa18.95■□□□□ 0.62
RFFL-204ENST00000414419 TRHP20396 242 aaPredicted RBP18.93■□□□□ 0.62
RFFL-204ENST00000414419 RAPGEF2Q9Y4G8 1499 aa18.9■□□□□ 0.62
RFFL-204ENST00000414419 IQGAP2Q13576 1575 aa18.84■□□□□ 0.61
RFFL-204ENST00000414419 CARMIL2Q6F5E8 1435 aa18.81■□□□□ 0.6
RFFL-204ENST00000414419 CTTNBP2Q8WZ74 1663 aa18.76■□□□□ 0.59
RFFL-204ENST00000414419 NPM1P06748 294 aaKnown RBP eCLIP18.76■□□□□ 0.59
RFFL-204ENST00000414419 CSRNP3Q8WYN3 585 aa18.76■□□□□ 0.59
RFFL-204ENST00000414419 TTBK1Q5TCY1 1321 aaPredicted RBP18.75■□□□□ 0.59
RFFL-204ENST00000414419 PRXQ9BXM0 1461 aa18.75■□□□□ 0.59
RFFL-204ENST00000414419 PTPRGP23470 1445 aa18.74■□□□□ 0.59
RFFL-204ENST00000414419 EEA1Q15075 1411 aa18.74■□□□□ 0.59
RFFL-204ENST00000414419 TNIKQ9UKE5 1360 aa18.72■□□□□ 0.59
RFFL-204ENST00000414419 UGGT2Q9NYU1 1516 aa18.7■□□□□ 0.58
RFFL-204ENST00000414419 CHIC1Q5VXU3 224 aa18.7■□□□□ 0.58
RFFL-204ENST00000414419 FAM9AQ8IZU1 332 aaPredicted RBP18.69■□□□□ 0.58
RFFL-204ENST00000414419 ADCY10Q96PN6 1610 aa18.68■□□□□ 0.58
RFFL-204ENST00000414419 DISP1Q96F81 1524 aa18.68■□□□□ 0.58
RFFL-204ENST00000414419 KIAA0556O60303 1618 aa18.65■□□□□ 0.58
RFFL-204ENST00000414419 GOLGA3Q08378 1498 aa18.64■□□□□ 0.57
RFFL-204ENST00000414419 MAPKBP1O60336 1514 aa18.6■□□□□ 0.57
RFFL-204ENST00000414419 KIF13AQ9H1H9 1805 aa18.6■□□□□ 0.57
RFFL-204ENST00000414419 UACAQ9BZF9 1416 aa18.59■□□□□ 0.57
RFFL-204ENST00000414419 ABCC2Q92887 1545 aa18.57■□□□□ 0.56
RFFL-204ENST00000414419 FAM69CQ0P6D2 419 aa18.56■□□□□ 0.56
RFFL-204ENST00000414419 UHRF1BP1LA0JNW5 1464 aa18.56■□□□□ 0.56
RFFL-204ENST00000414419 ABCC10Q5T3U5 1492 aa18.54■□□□□ 0.56
RFFL-204ENST00000414419 KIF21BO75037 1637 aa18.54■□□□□ 0.56
RFFL-204ENST00000414419 P3H3Q8IVL6 736 aa18.51■□□□□ 0.55
RFFL-204ENST00000414419 DIP2BQ9P265 1576 aa18.51■□□□□ 0.55
RFFL-204ENST00000414419 RANGAP1P46060 587 aaPredicted RBP18.5■□□□□ 0.55
RFFL-204ENST00000414419 EHMT2Q96KQ7 1210 aa18.48■□□□□ 0.55
RFFL-204ENST00000414419 KDM5BQ9UGL1 1544 aa18.48■□□□□ 0.55
RFFL-204ENST00000414419 PLB1Q6P1J6 1458 aa18.47■□□□□ 0.55
RFFL-204ENST00000414419 UBTFP17480 764 aaKnown RBP18.47■□□□□ 0.55
RFFL-204ENST00000414419 ASXL2Q76L83 1435 aa18.47■□□□□ 0.55
RFFL-204ENST00000414419 ZCCHC11Q5TAX3 1644 aaKnown RBP18.46■□□□□ 0.55
RFFL-204ENST00000414419 SAMD9Q5K651 1589 aa18.46■□□□□ 0.55
RFFL-204ENST00000414419 TSPOAP1O95153 1857 aa18.46■□□□□ 0.54
RFFL-204ENST00000414419 ABCA8O94911 1581 aa18.44■□□□□ 0.54
RFFL-204ENST00000414419 EFCAB5A4FU69 1503 aa18.37■□□□□ 0.53
RFFL-204ENST00000414419 GLI2P10070 1586 aa18.37■□□□□ 0.53
RFFL-204ENST00000414419 EPRSP07814 1512 aaKnown RBP18.35■□□□□ 0.53
RFFL-204ENST00000414419 WDR7Q9Y4E6 1490 aa18.35■□□□□ 0.53
RFFL-204ENST00000414419 FHOD3Q2V2M9 1422 aa18.35■□□□□ 0.53
RFFL-204ENST00000414419 ARID3CA6NKF2 412 aa18.35■□□□□ 0.53
RFFL-204ENST00000414419 RAPGEF6Q8TEU7 1601 aa18.34■□□□□ 0.53
RFFL-204ENST00000414419 KCNH8Q96L42 1107 aa18.33■□□□□ 0.52
RFFL-204ENST00000414419 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.32■□□□□ 0.52
RFFL-204ENST00000414419 HNRNPUL2Q1KMD3 747 aaKnown RBP18.32■□□□□ 0.52
RFFL-204ENST00000414419 ATP10BO94823 1461 aa18.29■□□□□ 0.52
RFFL-204ENST00000414419 KDM6BO15054 1643 aa18.29■□□□□ 0.52
RFFL-204ENST00000414419 MAP3K4Q9Y6R4 1608 aa18.29■□□□□ 0.52
RFFL-204ENST00000414419 PPRC1Q5VV67 1664 aaKnown RBP18.27■□□□□ 0.52
RFFL-204ENST00000414419 TEX14Q8IWB6 1497 aa18.25■□□□□ 0.51
RFFL-204ENST00000414419 CFAP43Q8NDM7 1665 aa18.25■□□□□ 0.51
RFFL-204ENST00000414419 NUP153P49790 1475 aaKnown RBP18.24■□□□□ 0.51
RFFL-204ENST00000414419 CD109Q6YHK3 1445 aa18.23■□□□□ 0.51
RFFL-204ENST00000414419 ARHGAP35Q9NRY4 1499 aa18.22■□□□□ 0.51
RFFL-204ENST00000414419 FMN1Q68DA7 1419 aa18.22■□□□□ 0.51
RFFL-204ENST00000414419 ATP1B4Q9UN42 357 aaPredicted RBP18.21■□□□□ 0.51
RFFL-204ENST00000414419 PLEKHD1A6NEE1 506 aa18.2■□□□□ 0.5
RFFL-204ENST00000414419 MAGI3Q5TCQ9 1506 aa18.16■□□□□ 0.5
RFFL-204ENST00000414419 HECW1Q76N89 1606 aa18.15■□□□□ 0.5
RFFL-204ENST00000414419 ABCA9Q8IUA7 1624 aa18.14■□□□□ 0.49
RFFL-204ENST00000414419 AEBP2Q6ZN18 517 aaPredicted RBP18.13■□□□□ 0.49
RFFL-204ENST00000414419 CDK13Q14004 1512 aaKnown RBP18.11■□□□□ 0.49
RFFL-204ENST00000414419 CDK11AQ9UQ88 783 aaPredicted RBP18.1■□□□□ 0.49
RFFL-204ENST00000414419 CLIP1P30622 1438 aa18.09■□□□□ 0.49
RFFL-204ENST00000414419 COL17A1Q9UMD9 1497 aaPredicted RBP18.08■□□□□ 0.49
RFFL-204ENST00000414419 PHLDB1Q86UU1 1377 aa18.05■□□□□ 0.48
RFFL-204ENST00000414419 CASKIN1Q8WXD9 1431 aa18.03■□□□□ 0.48
RFFL-204ENST00000414419 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.03■□□□□ 0.48
RFFL-204ENST00000414419 PCF11O94913 1555 aaKnown RBP18.02■□□□□ 0.48
RFFL-204ENST00000414419 LRRIQ1Q96JM4 1722 aa18.02■□□□□ 0.48
RFFL-204ENST00000414419 ARAP3Q8WWN8 1544 aa18.02■□□□□ 0.47
RFFL-204ENST00000414419 NEO1Q92859 1461 aa18.01■□□□□ 0.47
RFFL-204ENST00000414419 CCDC18Q5T9S5 1454 aa18.01■□□□□ 0.47
RFFL-204ENST00000414419 TTC37Q6PGP7 1564 aa18■□□□□ 0.47
RFFL-204ENST00000414419 FYCO1Q9BQS8 1478 aa17.98■□□□□ 0.47
RFFL-204ENST00000414419 CFAP74Q9C0B2 1584 aa17.98■□□□□ 0.47
RFFL-204ENST00000414419 KIF14Q15058 1648 aa17.97■□□□□ 0.47
RFFL-204ENST00000414419 TROQ12816 1431 aaPredicted RBP17.97■□□□□ 0.47
RFFL-204ENST00000414419 CEP162Q5TB80 1403 aa17.97■□□□□ 0.47
RFFL-204ENST00000414419 FANCAO15360 1455 aa17.96■□□□□ 0.47
RFFL-204ENST00000414419 MYO5CQ9NQX4 1742 aa17.95■□□□□ 0.46
RFFL-204ENST00000414419 LOC105371045A0A1W2PR82 267 aa17.95■□□□□ 0.46
RFFL-204ENST00000414419 RAPGEF3O95398 923 aa17.94■□□□□ 0.46
RFFL-204ENST00000414419 AKNAQ7Z591 1439 aa17.94■□□□□ 0.46
RFFL-204ENST00000414419 PLCH2O75038 1416 aa17.92■□□□□ 0.46
RFFL-204ENST00000414419 KDM4FA0A1W2PPD8 638 aa17.91■□□□□ 0.46
RFFL-204ENST00000414419 DENND4BO75064 1496 aaPredicted RBP17.9■□□□□ 0.46
RFFL-204ENST00000414419 EFCAB2Q5VUJ9 269 aa17.9■□□□□ 0.46
RFFL-204ENST00000414419 ADGRL1O94910 1474 aa17.87■□□□□ 0.45
RFFL-204ENST00000414419 ARHGAP5Q13017 1502 aa17.87■□□□□ 0.45
RFFL-204ENST00000414419 RICTORQ6R327 1708 aa17.86■□□□□ 0.45
RFFL-204ENST00000414419 FRMPD1Q5SYB0 1578 aa17.85■□□□□ 0.45
RFFL-204ENST00000414419 SCAPERQ9BY12 1400 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms