RNA–Protein interactions for RNA: ENST00000414218.1

LMBR1-203, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-203ENST00000414218 RUSC2Q8N2Y8 1516 aa35.67■■■■□ 3.3
LMBR1-203ENST00000414218 CUL7Q14999 1698 aa35.66■■■■□ 3.3
LMBR1-203ENST00000414218 CARMIL1Q5VZK9 1371 aa35.55■■■■□ 3.28
LMBR1-203ENST00000414218 KIAA0586Q9BVV6 1533 aa35.54■■■■□ 3.28
LMBR1-203ENST00000414218 NPM1P06748 294 aaKnown RBP eCLIP35.26■■■■□ 3.24
LMBR1-203ENST00000414218 ADCY10Q96PN6 1610 aa35.24■■■■□ 3.23
LMBR1-203ENST00000414218 IQGAP2Q13576 1575 aa35.24■■■■□ 3.23
LMBR1-203ENST00000414218 RAPGEF2Q9Y4G8 1499 aa35.23■■■■□ 3.23
LMBR1-203ENST00000414218 PTPRGP23470 1445 aa35.19■■■■□ 3.22
LMBR1-203ENST00000414218 KIF13AQ9H1H9 1805 aa35.19■■■■□ 3.22
LMBR1-203ENST00000414218 CARMIL2Q6F5E8 1435 aa35.18■■■■□ 3.22
LMBR1-203ENST00000414218 TTBK1Q5TCY1 1321 aaPredicted RBP35.18■■■■□ 3.22
LMBR1-203ENST00000414218 TNIKQ9UKE5 1360 aa35.13■■■■□ 3.21
LMBR1-203ENST00000414218 MAPKBP1O60336 1514 aa35.11■■■■□ 3.21
LMBR1-203ENST00000414218 FAM69CQ0P6D2 419 aa35.08■■■■□ 3.21
LMBR1-203ENST00000414218 ABCC10Q5T3U5 1492 aa35.07■■■■□ 3.2
LMBR1-203ENST00000414218 DISP1Q96F81 1524 aa35.06■■■■□ 3.2
LMBR1-203ENST00000414218 UGGT2Q9NYU1 1516 aa35.02■■■■□ 3.2
LMBR1-203ENST00000414218 DIP2BQ9P265 1576 aa34.99■■■■□ 3.19
LMBR1-203ENST00000414218 PRXQ9BXM0 1461 aa34.94■■■■□ 3.18
LMBR1-203ENST00000414218 CTTNBP2Q8WZ74 1663 aa34.93■■■■□ 3.18
LMBR1-203ENST00000414218 ABCC2Q92887 1545 aa34.93■■■■□ 3.18
LMBR1-203ENST00000414218 UACAQ9BZF9 1416 aa34.91■■■■□ 3.18
LMBR1-203ENST00000414218 KIAA0556O60303 1618 aa34.91■■■■□ 3.18
LMBR1-203ENST00000414218 UHRF1BP1LA0JNW5 1464 aa34.9■■■■□ 3.18
LMBR1-203ENST00000414218 ASXL2Q76L83 1435 aa34.81■■■■□ 3.16
LMBR1-203ENST00000414218 TSPOAP1O95153 1857 aa34.8■■■■□ 3.16
LMBR1-203ENST00000414218 CSRNP3Q8WYN3 585 aa34.78■■■■□ 3.16
LMBR1-203ENST00000414218 PLB1Q6P1J6 1458 aa34.77■■■■□ 3.16
LMBR1-203ENST00000414218 GOLGA3Q08378 1498 aa34.76■■■■□ 3.15
LMBR1-203ENST00000414218 KDM5BQ9UGL1 1544 aa34.74■■■■□ 3.15
LMBR1-203ENST00000414218 ZCCHC11Q5TAX3 1644 aaKnown RBP34.69■■■■□ 3.14
LMBR1-203ENST00000414218 AEBP2Q6ZN18 517 aaPredicted RBP34.68■■■■□ 3.14
LMBR1-203ENST00000414218 GLI2P10070 1586 aa34.65■■■■□ 3.14
LMBR1-203ENST00000414218 EEA1Q15075 1411 aa34.63■■■■□ 3.13
LMBR1-203ENST00000414218 KDM6BO15054 1643 aa34.62■■■■□ 3.13
LMBR1-203ENST00000414218 EPRSP07814 1512 aaKnown RBP34.59■■■■□ 3.13
LMBR1-203ENST00000414218 ABCA8O94911 1581 aa34.58■■■■□ 3.13
LMBR1-203ENST00000414218 P3H3Q8IVL6 736 aa34.58■■■■□ 3.13
LMBR1-203ENST00000414218 FAM9AQ8IZU1 332 aaPredicted RBP34.58■■■■□ 3.13
LMBR1-203ENST00000414218 PPRC1Q5VV67 1664 aaKnown RBP34.54■■■■□ 3.12
LMBR1-203ENST00000414218 WDR7Q9Y4E6 1490 aa34.5■■■■□ 3.11
LMBR1-203ENST00000414218 MAP3K4Q9Y6R4 1608 aa34.48■■■■□ 3.11
LMBR1-203ENST00000414218 SAMD9Q5K651 1589 aa34.44■■■■□ 3.1
LMBR1-203ENST00000414218 RANGAP1P46060 587 aaPredicted RBP34.41■■■■□ 3.1
LMBR1-203ENST00000414218 KCNH8Q96L42 1107 aa34.4■■■■□ 3.1
LMBR1-203ENST00000414218 ARID3CA6NKF2 412 aa34.39■■■■□ 3.1
LMBR1-203ENST00000414218 CHIC1Q5VXU3 224 aa34.39■■■■□ 3.1
LMBR1-203ENST00000414218 TEX14Q8IWB6 1497 aa34.35■■■■□ 3.09
LMBR1-203ENST00000414218 KIF21BO75037 1637 aa34.33■■■■□ 3.09
LMBR1-203ENST00000414218 ATP10BO94823 1461 aa34.33■■■■□ 3.09
LMBR1-203ENST00000414218 COL17A1Q9UMD9 1497 aaPredicted RBP34.31■■■■□ 3.08
LMBR1-203ENST00000414218 CD109Q6YHK3 1445 aa34.28■■■■□ 3.08
LMBR1-203ENST00000414218 RAPGEF6Q8TEU7 1601 aa34.26■■■■□ 3.08
LMBR1-203ENST00000414218 CFAP43Q8NDM7 1665 aa34.26■■■■□ 3.08
LMBR1-203ENST00000414218 FHOD3Q2V2M9 1422 aa34.25■■■■□ 3.07
LMBR1-203ENST00000414218 EHMT2Q96KQ7 1210 aa34.23■■■■□ 3.07
LMBR1-203ENST00000414218 MAGI3Q5TCQ9 1506 aa34.21■■■■□ 3.07
LMBR1-203ENST00000414218 KDM4FA0A1W2PPD8 638 aa34.2■■■■□ 3.07
LMBR1-203ENST00000414218 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.16■■■■□ 3.06
LMBR1-203ENST00000414218 HNRNPUL2Q1KMD3 747 aaKnown RBP34.16■■■■□ 3.06
LMBR1-203ENST00000414218 UBTFP17480 764 aaKnown RBP34.15■■■■□ 3.06
LMBR1-203ENST00000414218 NUP153P49790 1475 aaKnown RBP34.14■■■■□ 3.06
LMBR1-203ENST00000414218 EFCAB5A4FU69 1503 aa34.14■■■■□ 3.06
LMBR1-203ENST00000414218 ABCA9Q8IUA7 1624 aa34.05■■■■□ 3.04
LMBR1-203ENST00000414218 PLEKHD1A6NEE1 506 aa33.97■■■■□ 3.03
LMBR1-203ENST00000414218 ADGRL1O94910 1474 aa33.96■■■■□ 3.03
LMBR1-203ENST00000414218 ARAP3Q8WWN8 1544 aa33.94■■■■□ 3.02
LMBR1-203ENST00000414218 ARHGAP35Q9NRY4 1499 aa33.91■■■■□ 3.02
LMBR1-203ENST00000414218 PHLDB1Q86UU1 1377 aa33.89■■■■□ 3.02
LMBR1-203ENST00000414218 CDK13Q14004 1512 aaKnown RBP33.87■■■■□ 3.01
LMBR1-203ENST00000414218 NEO1Q92859 1461 aa33.85■■■■□ 3.01
LMBR1-203ENST00000414218 ATP1B4Q9UN42 357 aaPredicted RBP33.85■■■■□ 3.01
LMBR1-203ENST00000414218 FMN1Q68DA7 1419 aa33.85■■■■□ 3.01
LMBR1-203ENST00000414218 RAPGEF3O95398 923 aa33.8■■■■□ 3
LMBR1-203ENST00000414218 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.79■■■■□ 31e-6■■■□□ 16.9
LMBR1-203ENST00000414218 HECW1Q76N89 1606 aa33.77■■■■□ 3
LMBR1-203ENST00000414218 TTC37Q6PGP7 1564 aa33.73■■■□□ 2.99
LMBR1-203ENST00000414218 FANCAO15360 1455 aa33.69■■■□□ 2.98
LMBR1-203ENST00000414218 FRMPD1Q5SYB0 1578 aa33.68■■■□□ 2.98
LMBR1-203ENST00000414218 AKNAQ7Z591 1439 aa33.68■■■□□ 2.98
LMBR1-203ENST00000414218 CFAP74Q9C0B2 1584 aa33.65■■■□□ 2.98
LMBR1-203ENST00000414218 CDK11AQ9UQ88 783 aaPredicted RBP33.65■■■□□ 2.98
LMBR1-203ENST00000414218 DENND4BO75064 1496 aaPredicted RBP33.63■■■□□ 2.97
LMBR1-203ENST00000414218 LRRIQ1Q96JM4 1722 aa33.6■■■□□ 2.97
LMBR1-203ENST00000414218 RICTORQ6R327 1708 aa33.59■■■□□ 2.97
LMBR1-203ENST00000414218 PLCH2O75038 1416 aa33.58■■■□□ 2.97
LMBR1-203ENST00000414218 TROQ12816 1431 aaPredicted RBP33.54■■■□□ 2.96
LMBR1-203ENST00000414218 KIF14Q15058 1648 aa33.53■■■□□ 2.96
LMBR1-203ENST00000414218 CASKIN1Q8WXD9 1431 aa33.53■■■□□ 2.96
LMBR1-203ENST00000414218 PCF11O94913 1555 aaKnown RBP33.52■■■□□ 2.96
LMBR1-203ENST00000414218 MYO5CQ9NQX4 1742 aa33.5■■■□□ 2.95
LMBR1-203ENST00000414218 CLIP1P30622 1438 aa33.49■■■□□ 2.95
LMBR1-203ENST00000414218 ARID4BQ4LE39 1312 aaPredicted RBP33.49■■■□□ 2.95
LMBR1-203ENST00000414218 EFCAB2Q5VUJ9 269 aa33.48■■■□□ 2.95
LMBR1-203ENST00000414218 ARHGEF40Q8TER5 1519 aa33.48■■■□□ 2.95
LMBR1-203ENST00000414218 SCAPERQ9BY12 1400 aa33.47■■■□□ 2.95
LMBR1-203ENST00000414218 ADAMTSL3P82987 1691 aa33.45■■■□□ 2.94
LMBR1-203ENST00000414218 ZMYM4Q5VZL5 1548 aa33.44■■■□□ 2.94
LMBR1-203ENST00000414218 CCDC18Q5T9S5 1454 aa33.44■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms