RNA–Protein interactions for RNA: ENST00000414120.1

LINC00887-202, long intergenic non-protein coding RNA 887, humanhuman

TSL 3 BASIC

Gene LINC00887, Length 2,880 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-202ENST00000414120 URB2Q14146 1524 aaKnown RBP19.56■□□□□ 0.72
LINC00887-202ENST00000414120 TAF7LQ5H9L4 462 aa19.54■□□□□ 0.72
LINC00887-202ENST00000414120 CCER1Q8TC90 406 aaPredicted RBP19.54■□□□□ 0.72
LINC00887-202ENST00000414120 AAMPQ13685 434 aa19.53■□□□□ 0.72
LINC00887-202ENST00000414120 CUX1P39880 1505 aa19.5■□□□□ 0.71
LINC00887-202ENST00000414120 TOPBP1Q92547 1522 aa19.5■□□□□ 0.71
LINC00887-202ENST00000414120 RSPH6AQ9H0K4 717 aa19.48■□□□□ 0.71
LINC00887-202ENST00000414120 THOC2Q8NI27 1593 aaKnown RBP19.46■□□□□ 0.71
LINC00887-202ENST00000414120 MIER1Q8N108 512 aa19.46■□□□□ 0.71
LINC00887-202ENST00000414120 SYNJ1O43426 1573 aa19.45■□□□□ 0.7
LINC00887-202ENST00000414120 C11orf95C9JLR9 678 aaPredicted RBP19.44■□□□□ 0.7
LINC00887-202ENST00000414120 DNMBPQ6XZF7 1577 aa19.43■□□□□ 0.7
LINC00887-202ENST00000414120 FGD5Q6ZNL6 1462 aa19.42■□□□□ 0.7
LINC00887-202ENST00000414120 WDR62O43379 1518 aa19.41■□□□□ 0.7
LINC00887-202ENST00000414120 RAD54L2Q9Y4B4 1467 aa19.4■□□□□ 0.7
LINC00887-202ENST00000414120 IL27Q8NEV9 243 aa19.4■□□□□ 0.7
LINC00887-202ENST00000414120 POLA1P09884 1462 aaPredicted RBP19.39■□□□□ 0.69
LINC00887-202ENST00000414120 SOGA1O94964 1423 aa19.38■□□□□ 0.69
LINC00887-202ENST00000414120 RBM10P98175 930 aaKnown RBP19.36■□□□□ 0.69
LINC00887-202ENST00000414120 BCL11BQ9C0K0 894 aaPredicted RBP19.35■□□□□ 0.69
LINC00887-202ENST00000414120 TOP2BQ02880 1626 aa19.34■□□□□ 0.69
LINC00887-202ENST00000414120 TDRD9Q8NDG6 1382 aaKnown RBP19.33■□□□□ 0.69
LINC00887-202ENST00000414120 CUX2O14529 1486 aa19.32■□□□□ 0.68
LINC00887-202ENST00000414120 VSIG10Q8N0Z9 540 aa19.31■□□□□ 0.68
LINC00887-202ENST00000414120 EHMT2Q96KQ7 1210 aa19.3■□□□□ 0.68
LINC00887-202ENST00000414120 BIVM-ERCC5R4GMW8 1640 aa19.27■□□□□ 0.67
LINC00887-202ENST00000414120 TIMELESSQ9UNS1 1208 aa19.26■□□□□ 0.67
LINC00887-202ENST00000414120 ZNF608Q9ULD9 1512 aaPredicted RBP19.26■□□□□ 0.67
LINC00887-202ENST00000414120 ZNF326Q5BKZ1 582 aaKnown RBP19.26■□□□□ 0.67
LINC00887-202ENST00000414120 HOMEZQ8IX15 550 aa19.26■□□□□ 0.67
LINC00887-202ENST00000414120 AQRO60306 1485 aaKnown RBP eCLIP19.25■□□□□ 0.67
LINC00887-202ENST00000414120 IFT140Q96RY7 1462 aa19.24■□□□□ 0.67
LINC00887-202ENST00000414120 A0A0U1RQG5 324 aaPredicted RBP19.22■□□□□ 0.67
LINC00887-202ENST00000414120 LOC105371045A0A1W2PR82 267 aa19.19■□□□□ 0.66
LINC00887-202ENST00000414120 FBLN2P98095 1184 aa19.19■□□□□ 0.66
LINC00887-202ENST00000414120 RUSC2Q8N2Y8 1516 aa19.17■□□□□ 0.66
LINC00887-202ENST00000414120 RSPH4AQ5TD94 716 aa19.16■□□□□ 0.66
LINC00887-202ENST00000414120 RTN4Q9NQC3 1192 aaKnown RBP19.16■□□□□ 0.66
LINC00887-202ENST00000414120 RTL5Q5HYW3 569 aaPredicted RBP19.16■□□□□ 0.66
LINC00887-202ENST00000414120 TARBP1Q13395 1621 aaKnown RBP19.15■□□□□ 0.66
LINC00887-202ENST00000414120 ABCA10Q8WWZ4 1543 aa19.14■□□□□ 0.65
LINC00887-202ENST00000414120 WASHC2CQ9Y4E1 1318 aa19.14■□□□□ 0.65
LINC00887-202ENST00000414120 KIF27Q86VH2 1401 aa19.14■□□□□ 0.65
LINC00887-202ENST00000414120 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.12■□□□□ 0.65
LINC00887-202ENST00000414120 GAPVD1Q14C86 1478 aa19.12■□□□□ 0.65
LINC00887-202ENST00000414120 WASHC2AQ641Q2 1341 aa19.1■□□□□ 0.65
LINC00887-202ENST00000414120 NOP58Q9Y2X3 529 aaKnown RBP19.1■□□□□ 0.65
LINC00887-202ENST00000414120 BRD2P25440 801 aaKnown RBP19.08■□□□□ 0.65
LINC00887-202ENST00000414120 EIF4G3O43432 1585 aaKnown RBP19.07■□□□□ 0.64
LINC00887-202ENST00000414120 RRP9O43818 475 aaKnown RBP19.07■□□□□ 0.64
LINC00887-202ENST00000414120 CHMP7Q8WUX9 453 aaPredicted RBP19.03■□□□□ 0.64
LINC00887-202ENST00000414120 USP35Q9P2H5 1018 aa19.03■□□□□ 0.64
LINC00887-202ENST00000414120 GRIN2BQ13224 1484 aa19.02■□□□□ 0.64
LINC00887-202ENST00000414120 CDK11AQ9UQ88 783 aaPredicted RBP19.02■□□□□ 0.64
LINC00887-202ENST00000414120 FKBP8Q14318 412 aa19.02■□□□□ 0.63
LINC00887-202ENST00000414120 IGF1RP08069 1367 aa19.01■□□□□ 0.63
LINC00887-202ENST00000414120 SNAPC4Q5SXM2 1469 aa19.01■□□□□ 0.63
LINC00887-202ENST00000414120 WDR97A6NE52 1622 aa19■□□□□ 0.63
LINC00887-202ENST00000414120 FAM43AQ8N2R8 423 aa18.98■□□□□ 0.63
LINC00887-202ENST00000414120 ABCA5Q8WWZ7 1642 aa18.97■□□□□ 0.63
LINC00887-202ENST00000414120 CARMIL1Q5VZK9 1371 aa18.95■□□□□ 0.62
LINC00887-202ENST00000414120 AEBP2Q6ZN18 517 aaPredicted RBP18.93■□□□□ 0.62
LINC00887-202ENST00000414120 UBTFP17480 764 aaKnown RBP18.92■□□□□ 0.62
LINC00887-202ENST00000414120 NBR1Q14596 966 aa18.92■□□□□ 0.62
LINC00887-202ENST00000414120 EEA1Q15075 1411 aa18.91■□□□□ 0.62
LINC00887-202ENST00000414120 BCANQ96GW7 911 aa18.91■□□□□ 0.62
LINC00887-202ENST00000414120 PBRM1Q86U86 1689 aa18.9■□□□□ 0.62
LINC00887-202ENST00000414120 ERICH3Q5RHP9 1530 aa18.88■□□□□ 0.61
LINC00887-202ENST00000414120 HSP90AA2PQ14568 343 aaPredicted RBP18.88■□□□□ 0.61
LINC00887-202ENST00000414120 NAP1L5Q96NT1 182 aaPredicted RBP18.87■□□□□ 0.61
LINC00887-202ENST00000414120 MAGI1Q96QZ7 1491 aaPredicted RBP18.87■□□□□ 0.61
LINC00887-202ENST00000414120 FHAD1B1AJZ9 1412 aa18.87■□□□□ 0.61
LINC00887-202ENST00000414120 CENPJQ9HC77 1338 aaPredicted RBP18.86■□□□□ 0.61
LINC00887-202ENST00000414120 CALD1Q05682 793 aaKnown RBP18.84■□□□□ 0.61
LINC00887-202ENST00000414120 CHMP4AQ9BY43 222 aa18.83■□□□□ 0.61
LINC00887-202ENST00000414120 NAP1L2Q9ULW6 460 aaPredicted RBP18.83■□□□□ 0.61
LINC00887-202ENST00000414120 SYNJ2O15056 1496 aa18.83■□□□□ 0.61
LINC00887-202ENST00000414120 TULP1O00294 542 aaPredicted RBP18.83■□□□□ 0.6
LINC00887-202ENST00000414120 IPO4Q8TEX9 1081 aaKnown RBP18.83■□□□□ 0.6
LINC00887-202ENST00000414120 RAPGEF2Q9Y4G8 1499 aa18.82■□□□□ 0.6
LINC00887-202ENST00000414120 OSCARQ8IYS5 282 aa18.81■□□□□ 0.6
LINC00887-202ENST00000414120 ADAMTS12P58397 1594 aa18.81■□□□□ 0.6
LINC00887-202ENST00000414120 PLPPR3Q6T4P5 718 aa18.79■□□□□ 0.6
LINC00887-202ENST00000414120 GRIN2AQ12879 1464 aa18.78■□□□□ 0.6
LINC00887-202ENST00000414120 PRXQ9BXM0 1461 aa18.78■□□□□ 0.6
LINC00887-202ENST00000414120 NPM2Q86SE8 214 aaKnown RBP18.78■□□□□ 0.6
LINC00887-202ENST00000414120 PAXIP1Q6ZW49 1069 aaPredicted RBP18.76■□□□□ 0.59
LINC00887-202ENST00000414120 PRDM4Q9UKN5 801 aa18.76■□□□□ 0.59
LINC00887-202ENST00000414120 CUL7Q14999 1698 aa18.76■□□□□ 0.59
LINC00887-202ENST00000414120 CHD1O14646 1710 aa18.74■□□□□ 0.59
LINC00887-202ENST00000414120 BCCIPQ9P287 314 aaKnown RBP eCLIP18.73■□□□□ 0.59
LINC00887-202ENST00000414120 GOLGA3Q08378 1498 aa18.71■□□□□ 0.59
LINC00887-202ENST00000414120 PAK3O75914 559 aaPredicted RBP18.7■□□□□ 0.58
LINC00887-202ENST00000414120 P3H3Q8IVL6 736 aa18.69■□□□□ 0.58
LINC00887-202ENST00000414120 HSP90AA1P07900 732 aaKnown RBP18.69■□□□□ 0.58
LINC00887-202ENST00000414120 IPO9Q96P70 1041 aaKnown RBP18.69■□□□□ 0.58
LINC00887-202ENST00000414120 BRPF3Q9ULD4 1205 aa18.68■□□□□ 0.58
LINC00887-202ENST00000414120 SAMD1Q6SPF0 538 aaPredicted RBP18.67■□□□□ 0.58
LINC00887-202ENST00000414120 NEFMP07197 916 aa18.67■□□□□ 0.58
LINC00887-202ENST00000414120 NCLP19338 710 aaKnown RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms