RNA–Protein interactions for RNA: ENST00000413040.6

NUB1-201, Transcript of negative regulator of ubiquitin like proteins 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NUB1, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1-201ENST00000413040 FHOD3Q2V2M9 1422 aa19.98■□□□□ 0.79
NUB1-201ENST00000413040 NESP48681 1621 aa19.98■□□□□ 0.79
NUB1-201ENST00000413040 PHLDB1Q86UU1 1377 aa19.97■□□□□ 0.79
NUB1-201ENST00000413040 FHAD1B1AJZ9 1412 aa19.93■□□□□ 0.78
NUB1-201ENST00000413040 TIAM1Q13009 1591 aa19.93■□□□□ 0.78
NUB1-201ENST00000413040 LRRC9Q6ZRR7 1453 aa19.92■□□□□ 0.78
NUB1-201ENST00000413040 SETD5Q9C0A6 1442 aa19.9■□□□□ 0.78
NUB1-201ENST00000413040 PRDM2Q13029 1718 aa19.9■□□□□ 0.78
NUB1-201ENST00000413040 TDRD9Q8NDG6 1382 aaKnown RBP19.89■□□□□ 0.77
NUB1-201ENST00000413040 HIRIP3Q9BW71 556 aaPredicted RBP19.89■□□□□ 0.77
NUB1-201ENST00000413040 POLA1P09884 1462 aaPredicted RBP19.87■□□□□ 0.77
NUB1-201ENST00000413040 TOPBP1Q92547 1522 aa19.85■□□□□ 0.77
NUB1-201ENST00000413040 DNAJC5BQ9UF47 199 aa19.85■□□□□ 0.77
NUB1-201ENST00000413040 DDX10Q13206 875 aaKnown RBP19.84■□□□□ 0.77
NUB1-201ENST00000413040 PCF11O94913 1555 aaKnown RBP19.82■□□□□ 0.76
NUB1-201ENST00000413040 MTUS2Q5JR59 1369 aa19.81■□□□□ 0.76
NUB1-201ENST00000413040 KCNH8Q96L42 1107 aa19.8■□□□□ 0.76
NUB1-201ENST00000413040 ARID3CA6NKF2 412 aa19.8■□□□□ 0.76
NUB1-201ENST00000413040 DNMBPQ6XZF7 1577 aa19.8■□□□□ 0.76
NUB1-201ENST00000413040 ABCA10Q8WWZ4 1543 aa19.78■□□□□ 0.76
NUB1-201ENST00000413040 MAP3K1Q13233 1512 aa19.77■□□□□ 0.76
NUB1-201ENST00000413040 MAPKBP1O60336 1514 aa19.76■□□□□ 0.75
NUB1-201ENST00000413040 CASKIN1Q8WXD9 1431 aa19.71■□□□□ 0.75
NUB1-201ENST00000413040 CHIC2Q9UKJ5 165 aa19.7■□□□□ 0.74
NUB1-201ENST00000413040 FMN1Q68DA7 1419 aa19.7■□□□□ 0.74
NUB1-201ENST00000413040 FYCO1Q9BQS8 1478 aa19.69■□□□□ 0.74
NUB1-201ENST00000413040 URB2Q14146 1524 aaKnown RBP19.68■□□□□ 0.74
NUB1-201ENST00000413040 WDR97A6NE52 1622 aa19.67■□□□□ 0.74
NUB1-201ENST00000413040 GAPVD1Q14C86 1478 aa19.66■□□□□ 0.74
NUB1-201ENST00000413040 RRP7BPQ9NSQ0 103 aa19.66■□□□□ 0.74
NUB1-201ENST00000413040 TONSLQ96HA7 1378 aa19.65■□□□□ 0.74
NUB1-201ENST00000413040 PPP1R15AO75807 674 aaPredicted RBP19.65■□□□□ 0.74
NUB1-201ENST00000413040 FGD6Q6ZV73 1430 aa19.64■□□□□ 0.74
NUB1-201ENST00000413040 EFCAB5A4FU69 1503 aa19.64■□□□□ 0.73
NUB1-201ENST00000413040 SUPT16HQ9Y5B9 1047 aaKnown RBP19.63■□□□□ 0.73
NUB1-201ENST00000413040 TRIM52Q96A61 297 aa19.63■□□□□ 0.73
NUB1-201ENST00000413040 CFAP43Q8NDM7 1665 aa19.63■□□□□ 0.73
NUB1-201ENST00000413040 PDS5BQ9NTI5 1447 aa19.63■□□□□ 0.73
NUB1-201ENST00000413040 CUL7Q14999 1698 aa19.61■□□□□ 0.73
NUB1-201ENST00000413040 BCANQ96GW7 911 aa19.59■□□□□ 0.73
NUB1-201ENST00000413040 MYT1Q01538 1121 aa19.58■□□□□ 0.73
NUB1-201ENST00000413040 ANP32CO43423 234 aa19.56■□□□□ 0.72
NUB1-201ENST00000413040 AQRO60306 1485 aaKnown RBP eCLIP19.56■□□□□ 0.725e-7■■□□□ 12.3
NUB1-201ENST00000413040 CTTNBP2Q8WZ74 1663 aa19.56■□□□□ 0.72
NUB1-201ENST00000413040 TIMELESSQ9UNS1 1208 aa19.56■□□□□ 0.72
NUB1-201ENST00000413040 CCDC18Q5T9S5 1454 aa19.56■□□□□ 0.72
NUB1-201ENST00000413040 PTPRKQ15262 1439 aa19.56■□□□□ 0.72
NUB1-201ENST00000413040 LAMC3Q9Y6N6 1575 aa19.55■□□□□ 0.72
NUB1-201ENST00000413040 NCOA2Q15596 1464 aa19.54■□□□□ 0.72
NUB1-201ENST00000413040 SNAPC4Q5SXM2 1469 aa19.54■□□□□ 0.72
NUB1-201ENST00000413040 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.5■□□□□ 0.71
NUB1-201ENST00000413040 MYOM3Q5VTT5 1437 aa19.5■□□□□ 0.71
NUB1-201ENST00000413040 FKBP8Q14318 412 aa19.46■□□□□ 0.71
NUB1-201ENST00000413040 FOXD1Q16676 465 aa19.46■□□□□ 0.71
NUB1-201ENST00000413040 HFM1A2PYH4 1435 aa19.46■□□□□ 0.71
NUB1-201ENST00000413040 UACAQ9BZF9 1416 aa19.46■□□□□ 0.71
NUB1-201ENST00000413040 NAIPQ13075 1403 aa19.45■□□□□ 0.7
NUB1-201ENST00000413040 ABCA5Q8WWZ7 1642 aa19.44■□□□□ 0.7
NUB1-201ENST00000413040 GRIN2BQ13224 1484 aa19.44■□□□□ 0.7
NUB1-201ENST00000413040 KIF21AQ7Z4S6 1674 aa19.41■□□□□ 0.7
NUB1-201ENST00000413040 FBLN2P98095 1184 aa19.41■□□□□ 0.7
NUB1-201ENST00000413040 NEFLP07196 543 aa19.4■□□□□ 0.7
NUB1-201ENST00000413040 SAMD9Q5K651 1589 aa19.39■□□□□ 0.69
NUB1-201ENST00000413040 PTPN23Q9H3S7 1636 aa19.39■□□□□ 0.69
NUB1-201ENST00000413040 SUPT6HQ7KZ85 1726 aaKnown RBP19.38■□□□□ 0.69
NUB1-201ENST00000413040 EHBP1L1Q8N3D4 1523 aa19.37■□□□□ 0.69
NUB1-201ENST00000413040 CDK13Q14004 1512 aaKnown RBP19.36■□□□□ 0.69
NUB1-201ENST00000413040 MAGI3Q5TCQ9 1506 aa19.36■□□□□ 0.69
NUB1-201ENST00000413040 LRRIQ1Q96JM4 1722 aa19.36■□□□□ 0.69
NUB1-201ENST00000413040 MPHOSPH9Q99550 1183 aa19.35■□□□□ 0.69
NUB1-201ENST00000413040 HSPA5P11021 654 aaKnown RBP19.34■□□□□ 0.69
NUB1-201ENST00000413040 ZNF777Q9ULD5 760 aaPredicted RBP19.34■□□□□ 0.69
NUB1-201ENST00000413040 CCER2I3L3R5 266 aa19.34■□□□□ 0.69
NUB1-201ENST00000413040 ZNF644Q9H582 1327 aaPredicted RBP19.33■□□□□ 0.69
NUB1-201ENST00000413040 CNGB1Q14028 1251 aaPredicted RBP19.33■□□□□ 0.69
NUB1-201ENST00000413040 EPRSP07814 1512 aaKnown RBP19.32■□□□□ 0.68
NUB1-201ENST00000413040 UGGT2Q9NYU1 1516 aa19.31■□□□□ 0.68
NUB1-201ENST00000413040 HNRNPUQ00839 825 aaKnown RBP eCLIP19.3■□□□□ 0.68
NUB1-201ENST00000413040 L3MBTL2Q969R5 705 aa19.3■□□□□ 0.68
NUB1-201ENST00000413040 TARBP1Q13395 1621 aaKnown RBP19.3■□□□□ 0.68
NUB1-201ENST00000413040 IQGAP2Q13576 1575 aa19.3■□□□□ 0.68
NUB1-201ENST00000413040 EIF4G2P78344 907 aaKnown RBP eCLIP19.3■□□□□ 0.68
NUB1-201ENST00000413040 ZNF608Q9ULD9 1512 aaPredicted RBP19.28■□□□□ 0.68
NUB1-201ENST00000413040 SLC4A1APQ9BWU0 796 aaKnown RBP19.28■□□□□ 0.68
NUB1-201ENST00000413040 TSHZ2Q9NRE2 1034 aa19.28■□□□□ 0.68
NUB1-201ENST00000413040 CDK11AQ9UQ88 783 aaPredicted RBP19.27■□□□□ 0.68
NUB1-201ENST00000413040 CHMP7Q8WUX9 453 aaPredicted RBP19.26■□□□□ 0.67
NUB1-201ENST00000413040 POLR3GLQ9BT43 218 aa19.26■□□□□ 0.67
NUB1-201ENST00000413040 THOC2Q8NI27 1593 aaKnown RBP19.25■□□□□ 0.67
NUB1-201ENST00000413040 HECW1Q76N89 1606 aa19.25■□□□□ 0.67
NUB1-201ENST00000413040 ZNF326Q5BKZ1 582 aaKnown RBP19.25■□□□□ 0.67
NUB1-201ENST00000413040 MRC2Q9UBG0 1479 aa19.24■□□□□ 0.67
NUB1-201ENST00000413040 WASHC2AQ641Q2 1341 aa19.24■□□□□ 0.67
NUB1-201ENST00000413040 CFDP1Q9UEE9 299 aaPredicted RBP19.22■□□□□ 0.67
NUB1-201ENST00000413040 PBRM1Q86U86 1689 aa19.21■□□□□ 0.67
NUB1-201ENST00000413040 IRX6P78412 446 aaPredicted RBP19.21■□□□□ 0.67
NUB1-201ENST00000413040 KDM6BO15054 1643 aa19.19■□□□□ 0.66
NUB1-201ENST00000413040 ADAMTS12P58397 1594 aa19.19■□□□□ 0.66
NUB1-201ENST00000413040 MIA2Q96PC5 1412 aa19.18■□□□□ 0.66
NUB1-201ENST00000413040 FAM9BQ8IZU0 186 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms