RNA–Protein interactions for RNA: ENST00000412966.5

RAB5A-202, Transcript of RAB5A, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5A, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-202ENST00000412966 JPH4Q96JJ6 628 aa24.44■■□□□ 1.5
RAB5A-202ENST00000412966 IGF1RP08069 1367 aa24.29■■□□□ 1.48
RAB5A-202ENST00000412966 ADCY10Q96PN6 1610 aa24.28■■□□□ 1.48
RAB5A-202ENST00000412966 ABCC10Q5T3U5 1492 aa24.26■■□□□ 1.47
RAB5A-202ENST00000412966 MAPKBP1O60336 1514 aa24.26■■□□□ 1.47
RAB5A-202ENST00000412966 KIAA0586Q9BVV6 1533 aa24.26■■□□□ 1.47
RAB5A-202ENST00000412966 CUL7Q14999 1698 aa24.26■■□□□ 1.47
RAB5A-202ENST00000412966 KIF27Q86VH2 1401 aa24.24■■□□□ 1.47
RAB5A-202ENST00000412966 DIP2BQ9P265 1576 aa24.22■■□□□ 1.47
RAB5A-202ENST00000412966 FAM69CQ0P6D2 419 aa24.21■■□□□ 1.47
RAB5A-202ENST00000412966 NPM1P06748 294 aaKnown RBP eCLIP24.19■■□□□ 1.46
RAB5A-202ENST00000412966 CARMIL1Q5VZK9 1371 aa24.1■■□□□ 1.45
RAB5A-202ENST00000412966 TSPOAP1O95153 1857 aa24.08■■□□□ 1.45
RAB5A-202ENST00000412966 PTPRGP23470 1445 aa24.06■■□□□ 1.44
RAB5A-202ENST00000412966 KDM6BO15054 1643 aa24.04■■□□□ 1.44
RAB5A-202ENST00000412966 IQGAP2Q13576 1575 aa24.02■■□□□ 1.44
RAB5A-202ENST00000412966 TNIKQ9UKE5 1360 aa24.01■■□□□ 1.43
RAB5A-202ENST00000412966 CARMIL2Q6F5E8 1435 aa24■■□□□ 1.43
RAB5A-202ENST00000412966 TTBK1Q5TCY1 1321 aaPredicted RBP23.99■■□□□ 1.43
RAB5A-202ENST00000412966 ABCC2Q92887 1545 aa23.99■■□□□ 1.43
RAB5A-202ENST00000412966 DISP1Q96F81 1524 aa23.94■■□□□ 1.42
RAB5A-202ENST00000412966 UHRF1BP1LA0JNW5 1464 aa23.93■■□□□ 1.42
RAB5A-202ENST00000412966 ASXL2Q76L83 1435 aa23.93■■□□□ 1.42
RAB5A-202ENST00000412966 PPRC1Q5VV67 1664 aaKnown RBP23.92■■□□□ 1.42
RAB5A-202ENST00000412966 KDM4FA0A1W2PPD8 638 aa23.91■■□□□ 1.42
RAB5A-202ENST00000412966 GLI2P10070 1586 aa23.9■■□□□ 1.42
RAB5A-202ENST00000412966 PLB1Q6P1J6 1458 aa23.89■■□□□ 1.42
RAB5A-202ENST00000412966 UACAQ9BZF9 1416 aa23.88■■□□□ 1.41
RAB5A-202ENST00000412966 UGGT2Q9NYU1 1516 aa23.86■■□□□ 1.41
RAB5A-202ENST00000412966 RAPGEF2Q9Y4G8 1499 aa23.86■■□□□ 1.41
RAB5A-202ENST00000412966 KDM5BQ9UGL1 1544 aa23.83■■□□□ 1.41
RAB5A-202ENST00000412966 KIAA0556O60303 1618 aa23.81■■□□□ 1.4
RAB5A-202ENST00000412966 ZCCHC11Q5TAX3 1644 aaKnown RBP23.8■■□□□ 1.4
RAB5A-202ENST00000412966 EPRSP07814 1512 aaKnown RBP23.79■■□□□ 1.4
RAB5A-202ENST00000412966 MAP3K4Q9Y6R4 1608 aa23.78■■□□□ 1.4
RAB5A-202ENST00000412966 COL17A1Q9UMD9 1497 aaPredicted RBP23.75■■□□□ 1.39
RAB5A-202ENST00000412966 CTTNBP2Q8WZ74 1663 aa23.73■■□□□ 1.39
RAB5A-202ENST00000412966 TEX14Q8IWB6 1497 aa23.67■■□□□ 1.38
RAB5A-202ENST00000412966 ADGRL1O94910 1474 aa23.66■■□□□ 1.38
RAB5A-202ENST00000412966 WDR7Q9Y4E6 1490 aa23.65■■□□□ 1.38
RAB5A-202ENST00000412966 ABCA8O94911 1581 aa23.62■■□□□ 1.37
RAB5A-202ENST00000412966 GOLGA3Q08378 1498 aa23.6■■□□□ 1.37
RAB5A-202ENST00000412966 PRXQ9BXM0 1461 aa23.59■■□□□ 1.37
RAB5A-202ENST00000412966 CFAP43Q8NDM7 1665 aa23.56■■□□□ 1.36
RAB5A-202ENST00000412966 MAGI3Q5TCQ9 1506 aa23.54■■□□□ 1.36
RAB5A-202ENST00000412966 CD109Q6YHK3 1445 aa23.52■■□□□ 1.36
RAB5A-202ENST00000412966 KCNH8Q96L42 1107 aa23.49■■□□□ 1.35
RAB5A-202ENST00000412966 HECW2Q9P2P5 1572 aa23.41■■□□□ 1.34
RAB5A-202ENST00000412966 ATP10BO94823 1461 aa23.41■■□□□ 1.34
RAB5A-202ENST00000412966 P3H3Q8IVL6 736 aa23.39■■□□□ 1.33
RAB5A-202ENST00000412966 SAMD9Q5K651 1589 aa23.37■■□□□ 1.33
RAB5A-202ENST00000412966 ARID3CA6NKF2 412 aa23.37■■□□□ 1.33
RAB5A-202ENST00000412966 KIF21BO75037 1637 aa23.37■■□□□ 1.33
RAB5A-202ENST00000412966 ILDR1Q86SU0 546 aaPredicted RBP23.36■■□□□ 1.33
RAB5A-202ENST00000412966 ARAP3Q8WWN8 1544 aa23.36■■□□□ 1.33
RAB5A-202ENST00000412966 ABCA9Q8IUA7 1624 aa23.34■■□□□ 1.33
RAB5A-202ENST00000412966 RAPGEF6Q8TEU7 1601 aa23.31■■□□□ 1.32
RAB5A-202ENST00000412966 CSRNP3Q8WYN3 585 aa23.3■■□□□ 1.32
RAB5A-202ENST00000412966 FAM9AQ8IZU1 332 aaPredicted RBP23.27■■□□□ 1.32
RAB5A-202ENST00000412966 PHLDB1Q86UU1 1377 aa23.24■■□□□ 1.31
RAB5A-202ENST00000412966 NUP153P49790 1475 aaKnown RBP23.23■■□□□ 1.31
RAB5A-202ENST00000412966 NEO1Q92859 1461 aa23.21■■□□□ 1.31
RAB5A-202ENST00000412966 ADAMTSL3P82987 1691 aa23.2■■□□□ 1.3
RAB5A-202ENST00000412966 FRMPD1Q5SYB0 1578 aa23.2■■□□□ 1.3
RAB5A-202ENST00000412966 RAPGEF3O95398 923 aa23.19■■□□□ 1.3
RAB5A-202ENST00000412966 FHOD3Q2V2M9 1422 aa23.18■■□□□ 1.3
RAB5A-202ENST00000412966 EEA1Q15075 1411 aa23.16■■□□□ 1.3
RAB5A-202ENST00000412966 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.16■■□□□ 1.3
RAB5A-202ENST00000412966 HNRNPUL2Q1KMD3 747 aaKnown RBP23.16■■□□□ 1.3
RAB5A-202ENST00000412966 RANGAP1P46060 587 aaPredicted RBP23.14■■□□□ 1.29
RAB5A-202ENST00000412966 PTPRMP28827 1452 aa23.13■■□□□ 1.29
RAB5A-202ENST00000412966 BCORL1Q5H9F3 1711 aa23.13■■□□□ 1.29
RAB5A-202ENST00000412966 RICTORQ6R327 1708 aa23.09■■□□□ 1.29
RAB5A-202ENST00000412966 MADDQ8WXG6 1647 aa23.08■■□□□ 1.28
RAB5A-202ENST00000412966 ARHGEF40Q8TER5 1519 aa23.07■■□□□ 1.28
RAB5A-202ENST00000412966 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.06■■□□□ 1.28
RAB5A-202ENST00000412966 EFCAB5A4FU69 1503 aa23.05■■□□□ 1.28
RAB5A-202ENST00000412966 PLEKHD1A6NEE1 506 aa23.05■■□□□ 1.28
RAB5A-202ENST00000412966 TTC37Q6PGP7 1564 aa23.04■■□□□ 1.28
RAB5A-202ENST00000412966 DENND4BO75064 1496 aaPredicted RBP23.04■■□□□ 1.28
RAB5A-202ENST00000412966 CFAP74Q9C0B2 1584 aa23.03■■□□□ 1.28
RAB5A-202ENST00000412966 AKNAQ7Z591 1439 aa23.03■■□□□ 1.28
RAB5A-202ENST00000412966 FANCAO15360 1455 aa23.02■■□□□ 1.28
RAB5A-202ENST00000412966 ARID4BQ4LE39 1312 aaPredicted RBP23.01■■□□□ 1.27
RAB5A-202ENST00000412966 CDK13Q14004 1512 aaKnown RBP22.99■■□□□ 1.27
RAB5A-202ENST00000412966 RIMS1Q86UR5 1692 aaKnown RBP22.98■■□□□ 1.27
RAB5A-202ENST00000412966 ZMYM4Q5VZL5 1548 aa22.98■■□□□ 1.27
RAB5A-202ENST00000412966 SIGLEC1Q9BZZ2 1709 aa22.97■■□□□ 1.27
RAB5A-202ENST00000412966 PCF11O94913 1555 aaKnown RBP22.97■■□□□ 1.27
RAB5A-202ENST00000412966 LMTK3Q96Q04 1460 aa22.95■■□□□ 1.26
RAB5A-202ENST00000412966 YEATS2Q9ULM3 1422 aa22.92■■□□□ 1.26
RAB5A-202ENST00000412966 ZFYVE16Q7Z3T8 1539 aa22.92■■□□□ 1.26
RAB5A-202ENST00000412966 HECW1Q76N89 1606 aa22.9■■□□□ 1.26
RAB5A-202ENST00000412966 FBXO41Q8TF61 875 aa22.89■■□□□ 1.25
RAB5A-202ENST00000412966 MAGI2Q86UL8 1455 aa22.88■■□□□ 1.25
RAB5A-202ENST00000412966 PLCH2O75038 1416 aa22.88■■□□□ 1.25
RAB5A-202ENST00000412966 POGZQ7Z3K3 1410 aa22.86■■□□□ 1.25
RAB5A-202ENST00000412966 ARHGAP35Q9NRY4 1499 aa22.85■■□□□ 1.25
RAB5A-202ENST00000412966 SCAPERQ9BY12 1400 aa22.85■■□□□ 1.25
RAB5A-202ENST00000412966 EHMT2Q96KQ7 1210 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms