RNA–Protein interactions for RNA: ENST00000411436.1

AC009965.1-201, humanhuman

TSL 4 BASIC

Gene AC009965.1, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009965.1-201ENST00000411436 URB2Q14146 1524 aaKnown RBP12.67□□□□□ -0.38
AC009965.1-201ENST00000411436 SSUH2Q9Y2M2 353 aa12.66□□□□□ -0.38
AC009965.1-201ENST00000411436 RSF1Q96T23 1441 aaPredicted RBP12.63□□□□□ -0.39
AC009965.1-201ENST00000411436 TOP2AP11388 1531 aaKnown RBP12.63□□□□□ -0.39
AC009965.1-201ENST00000411436 ZNF692Q9BU19 519 aaPredicted RBP12.6□□□□□ -0.39
AC009965.1-201ENST00000411436 RBM42Q9BTD8 480 aaKnown RBP12.57□□□□□ -0.4
AC009965.1-201ENST00000411436 RIMBP3CA6NJZ7 1639 aa12.55□□□□□ -0.4
AC009965.1-201ENST00000411436 RIMBP3BA6NNM3 1639 aa12.55□□□□□ -0.4
AC009965.1-201ENST00000411436 RIMBP3Q9UFD9 1639 aa12.55□□□□□ -0.4
AC009965.1-201ENST00000411436 IFT140Q96RY7 1462 aa12.55□□□□□ -0.4
AC009965.1-201ENST00000411436 ZNF608Q9ULD9 1512 aaPredicted RBP12.55□□□□□ -0.4
AC009965.1-201ENST00000411436 ARHGEF11O15085 1522 aa12.51□□□□□ -0.41
AC009965.1-201ENST00000411436 PRDM2Q13029 1718 aa12.51□□□□□ -0.41
AC009965.1-201ENST00000411436 CCDC88BA6NC98 1476 aa12.5□□□□□ -0.41
AC009965.1-201ENST00000411436 TOPBP1Q92547 1522 aa12.49□□□□□ -0.41
AC009965.1-201ENST00000411436 AKT1S1Q96B36 256 aa12.49□□□□□ -0.41
AC009965.1-201ENST00000411436 EIF4G3O43432 1585 aaKnown RBP12.46□□□□□ -0.42
AC009965.1-201ENST00000411436 ABCC8Q09428 1581 aa12.46□□□□□ -0.42
AC009965.1-201ENST00000411436 CYB5RLQ6IPT4 315 aa12.43□□□□□ -0.42
AC009965.1-201ENST00000411436 DNMBPQ6XZF7 1577 aa12.43□□□□□ -0.42
AC009965.1-201ENST00000411436 AQRO60306 1485 aaKnown RBP eCLIP12.4□□□□□ -0.42
AC009965.1-201ENST00000411436 TARBP1Q13395 1621 aaKnown RBP12.39□□□□□ -0.43
AC009965.1-201ENST00000411436 ARAP1Q96P48 1450 aa12.38□□□□□ -0.43
AC009965.1-201ENST00000411436 CHD1O14646 1710 aa12.37□□□□□ -0.43
AC009965.1-201ENST00000411436 POLA1P09884 1462 aaPredicted RBP12.36□□□□□ -0.43
AC009965.1-201ENST00000411436 REM2Q8IYK8 340 aaPredicted RBP12.35□□□□□ -0.43
AC009965.1-201ENST00000411436 FBXO3Q9UK99 471 aa12.34□□□□□ -0.43
AC009965.1-201ENST00000411436 RAD54L2Q9Y4B4 1467 aa12.31□□□□□ -0.44
AC009965.1-201ENST00000411436 TDRD9Q8NDG6 1382 aaKnown RBP12.3□□□□□ -0.44
AC009965.1-201ENST00000411436 SOGA1O94964 1423 aa12.29□□□□□ -0.44
AC009965.1-201ENST00000411436 STAG3Q9UJ98 1225 aa12.27□□□□□ -0.45
AC009965.1-201ENST00000411436 SNAPC4Q5SXM2 1469 aa12.27□□□□□ -0.45
AC009965.1-201ENST00000411436 CLASP1Q7Z460 1538 aa12.27□□□□□ -0.45
AC009965.1-201ENST00000411436 SPDYE1Q8NFV5 336 aaPredicted RBP12.26□□□□□ -0.45
AC009965.1-201ENST00000411436 WDR97A6NE52 1622 aa12.26□□□□□ -0.45
AC009965.1-201ENST00000411436 FGD5Q6ZNL6 1462 aa12.25□□□□□ -0.45
AC009965.1-201ENST00000411436 CHMP7Q8WUX9 453 aaPredicted RBP12.24□□□□□ -0.45
AC009965.1-201ENST00000411436 MAGI1Q96QZ7 1491 aaPredicted RBP12.24□□□□□ -0.45
AC009965.1-201ENST00000411436 SYNJ1O43426 1573 aa12.23□□□□□ -0.45
AC009965.1-201ENST00000411436 GRIN2BQ13224 1484 aa12.22□□□□□ -0.45
AC009965.1-201ENST00000411436 PITPNM1O00562 1244 aa12.2□□□□□ -0.46
AC009965.1-201ENST00000411436 CUX1P39880 1505 aa12.2□□□□□ -0.46
AC009965.1-201ENST00000411436 SYNJ2O15056 1496 aa12.2□□□□□ -0.46
AC009965.1-201ENST00000411436 VASPP50552 380 aaPredicted RBP12.19□□□□□ -0.46
AC009965.1-201ENST00000411436 GAPVD1Q14C86 1478 aa12.14□□□□□ -0.47
AC009965.1-201ENST00000411436 PBRM1Q86U86 1689 aa12.11□□□□□ -0.47
AC009965.1-201ENST00000411436 CLEC11AQ9Y240 323 aa12.11□□□□□ -0.47
AC009965.1-201ENST00000411436 ABCA10Q8WWZ4 1543 aa12.11□□□□□ -0.47
AC009965.1-201ENST00000411436 ABCA5Q8WWZ7 1642 aa12.09□□□□□ -0.47
AC009965.1-201ENST00000411436 IFNLR1Q8IU57 520 aaPredicted RBP12.08□□□□□ -0.48
AC009965.1-201ENST00000411436 PRR29P0C7W0 189 aa12.07□□□□□ -0.48
AC009965.1-201ENST00000411436 GRIN2AQ12879 1464 aa12.06□□□□□ -0.48
AC009965.1-201ENST00000411436 ERCC6L2Q5T890 1561 aa12.05□□□□□ -0.48
AC009965.1-201ENST00000411436 CHRDL2Q6WN34 429 aa12.03□□□□□ -0.48
AC009965.1-201ENST00000411436 CREBZFQ9NS37 354 aa12.03□□□□□ -0.48
AC009965.1-201ENST00000411436 NUP160Q12769 1436 aa12.03□□□□□ -0.48
AC009965.1-201ENST00000411436 FXR2P51116 673 aaKnown RBP eCLIP12.02□□□□□ -0.49
AC009965.1-201ENST00000411436 WRNQ14191 1432 aaPredicted RBP eCLIP12.02□□□□□ -0.49
AC009965.1-201ENST00000411436 ADAMTS12P58397 1594 aa12.01□□□□□ -0.49
AC009965.1-201ENST00000411436 CEP170Q5SW79 1584 aa12.01□□□□□ -0.49
AC009965.1-201ENST00000411436 MIER1Q8N108 512 aa12.01□□□□□ -0.49
AC009965.1-201ENST00000411436 MNX1P50219 401 aaPredicted RBP11.99□□□□□ -0.49
AC009965.1-201ENST00000411436 FHAD1B1AJZ9 1412 aa11.99□□□□□ -0.49
AC009965.1-201ENST00000411436 SHROOM2Q13796 1616 aa11.99□□□□□ -0.49
AC009965.1-201ENST00000411436 PLCD3Q8N3E9 789 aa11.97□□□□□ -0.49
AC009965.1-201ENST00000411436 TOP2BQ02880 1626 aa11.95□□□□□ -0.5
AC009965.1-201ENST00000411436 ERICH3Q5RHP9 1530 aa11.95□□□□□ -0.5
AC009965.1-201ENST00000411436 BIVM-ERCC5R4GMW8 1640 aa11.94□□□□□ -0.5
AC009965.1-201ENST00000411436 PRG4Q92954 1404 aaPredicted RBP11.93□□□□□ -0.5
AC009965.1-201ENST00000411436 SUPT5HO00267 1087 aaKnown RBP11.92□□□□□ -0.5
AC009965.1-201ENST00000411436 PIP4P2Q8N4L2 257 aa11.92□□□□□ -0.5
AC009965.1-201ENST00000411436 JPH4Q96JJ6 628 aa11.9□□□□□ -0.5
AC009965.1-201ENST00000411436 KIF13AQ9H1H9 1805 aa11.89□□□□□ -0.51
AC009965.1-201ENST00000411436 PLEKHG5O94827 1062 aa11.89□□□□□ -0.51
AC009965.1-201ENST00000411436 ZBTB47Q9UFB7 747 aaPredicted RBP11.89□□□□□ -0.51
AC009965.1-201ENST00000411436 CHADLQ6NUI6 762 aa11.87□□□□□ -0.51
AC009965.1-201ENST00000411436 FAM69CQ0P6D2 419 aa11.86□□□□□ -0.51
AC009965.1-201ENST00000411436 AMER1Q5JTC6 1135 aaPredicted RBP11.86□□□□□ -0.51
AC009965.1-201ENST00000411436 ABCC10Q5T3U5 1492 aa11.86□□□□□ -0.51
AC009965.1-201ENST00000411436 RUSC2Q8N2Y8 1516 aa11.86□□□□□ -0.51
AC009965.1-201ENST00000411436 NPM1P06748 294 aaKnown RBP eCLIP11.85□□□□□ -0.51
AC009965.1-201ENST00000411436 PRKAR2AP13861 404 aaKnown RBP11.85□□□□□ -0.51
AC009965.1-201ENST00000411436 KLHL34Q8N239 644 aa11.85□□□□□ -0.51
AC009965.1-201ENST00000411436 SPOCK2Q92563 424 aa11.85□□□□□ -0.51
AC009965.1-201ENST00000411436 MAPKBP1O60336 1514 aa11.85□□□□□ -0.51
AC009965.1-201ENST00000411436 RTN4Q9NQC3 1192 aaKnown RBP11.84□□□□□ -0.51
AC009965.1-201ENST00000411436 NUBP1P53384 320 aa11.82□□□□□ -0.52
AC009965.1-201ENST00000411436 DIP2BQ9P265 1576 aa11.81□□□□□ -0.52
AC009965.1-201ENST00000411436 FARP1Q9Y4F1 1045 aaPredicted RBP11.81□□□□□ -0.52
AC009965.1-201ENST00000411436 ADCY10Q96PN6 1610 aa11.81□□□□□ -0.52
AC009965.1-201ENST00000411436 KIAA0586Q9BVV6 1533 aa11.78□□□□□ -0.52
AC009965.1-201ENST00000411436 KDM6BO15054 1643 aa11.77□□□□□ -0.53
AC009965.1-201ENST00000411436 KDM4FA0A1W2PPD8 638 aa11.75□□□□□ -0.53
AC009965.1-201ENST00000411436 IGF1RP08069 1367 aa11.75□□□□□ -0.53
AC009965.1-201ENST00000411436 KIF27Q86VH2 1401 aa11.72□□□□□ -0.53
AC009965.1-201ENST00000411436 PKD2Q13563 968 aa11.72□□□□□ -0.53
AC009965.1-201ENST00000411436 CUL7Q14999 1698 aa11.71□□□□□ -0.53
AC009965.1-201ENST00000411436 PTPRGP23470 1445 aa11.71□□□□□ -0.53
AC009965.1-201ENST00000411436 POTEHQ6S545 545 aa11.71□□□□□ -0.53
AC009965.1-201ENST00000411436 RASEFQ8IZ41 740 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms