RNA–Protein interactions for RNA: ENST00000410465.1

RN7SKP229-201, Transcript of RNA, 7SK small nuclear pseudogene 229, humanhuman

BASIC

Gene RN7SKP229, Length 302 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP229-201ENST00000410465 SHROOM2Q13796 1616 aa11.12□□□□□ -0.63
RN7SKP229-201ENST00000410465 DISP3Q9P2K9 1392 aa11.11□□□□□ -0.63
RN7SKP229-201ENST00000410465 GRIN2AQ12879 1464 aa11.11□□□□□ -0.63
RN7SKP229-201ENST00000410465 NUP160Q12769 1436 aa11.09□□□□□ -0.63
RN7SKP229-201ENST00000410465 PRG4Q92954 1404 aaPredicted RBP11.07□□□□□ -0.64
RN7SKP229-201ENST00000410465 CUX1P39880 1505 aa11.04□□□□□ -0.64
RN7SKP229-201ENST00000410465 ADCY10Q96PN6 1610 aa11.04□□□□□ -0.64
RN7SKP229-201ENST00000410465 COL17A1Q9UMD9 1497 aaPredicted RBP11.03□□□□□ -0.64
RN7SKP229-201ENST00000410465 ABCA5Q8WWZ7 1642 aa11.02□□□□□ -0.65
RN7SKP229-201ENST00000410465 JPH4Q96JJ6 628 aa11.01□□□□□ -0.65
RN7SKP229-201ENST00000410465 PPRC1Q5VV67 1664 aaKnown RBP11.01□□□□□ -0.65
RN7SKP229-201ENST00000410465 ADAMTS12P58397 1594 aa10.99□□□□□ -0.65
RN7SKP229-201ENST00000410465 ABCA10Q8WWZ4 1543 aa10.97□□□□□ -0.65
RN7SKP229-201ENST00000410465 TOP2BQ02880 1626 aa10.95□□□□□ -0.66
RN7SKP229-201ENST00000410465 FHAD1B1AJZ9 1412 aa10.93□□□□□ -0.66
RN7SKP229-201ENST00000410465 CERKQ8TCT0 537 aa10.91□□□□□ -0.66
RN7SKP229-201ENST00000410465 SPATA31D1Q6ZQQ2 1576 aa10.9□□□□□ -0.66
RN7SKP229-201ENST00000410465 GLI2P10070 1586 aa10.89□□□□□ -0.67
RN7SKP229-201ENST00000410465 ASXL2Q76L83 1435 aa10.87□□□□□ -0.67
RN7SKP229-201ENST00000410465 RUSC2Q8N2Y8 1516 aa10.85□□□□□ -0.67
RN7SKP229-201ENST00000410465 PTPRMP28827 1452 aa10.84□□□□□ -0.67
RN7SKP229-201ENST00000410465 PLB1Q6P1J6 1458 aa10.84□□□□□ -0.67
RN7SKP229-201ENST00000410465 TTBK1Q5TCY1 1321 aaPredicted RBP10.84□□□□□ -0.67
RN7SKP229-201ENST00000410465 PCF11O94913 1555 aaKnown RBP10.83□□□□□ -0.68
RN7SKP229-201ENST00000410465 KIF21BO75037 1637 aa10.83□□□□□ -0.68
RN7SKP229-201ENST00000410465 MAP3K4Q9Y6R4 1608 aa10.82□□□□□ -0.68
RN7SKP229-201ENST00000410465 TEX14Q8IWB6 1497 aa10.81□□□□□ -0.68
RN7SKP229-201ENST00000410465 ABCC2Q92887 1545 aa10.81□□□□□ -0.68
RN7SKP229-201ENST00000410465 HSPA2P54652 639 aa10.81□□□□□ -0.68
RN7SKP229-201ENST00000410465 EPRSP07814 1512 aaKnown RBP10.8□□□□□ -0.68
RN7SKP229-201ENST00000410465 ERICH3Q5RHP9 1530 aa10.8□□□□□ -0.68
RN7SKP229-201ENST00000410465 PTPRGP23470 1445 aa10.79□□□□□ -0.68
RN7SKP229-201ENST00000410465 WRNQ14191 1432 aaPredicted RBP eCLIP10.78□□□□□ -0.68
RN7SKP229-201ENST00000410465 CUL7Q14999 1698 aa10.78□□□□□ -0.68
RN7SKP229-201ENST00000410465 ADAMTSL3P82987 1691 aa10.76□□□□□ -0.69
RN7SKP229-201ENST00000410465 KIAA0586Q9BVV6 1533 aa10.72□□□□□ -0.69
RN7SKP229-201ENST00000410465 MADDQ8WXG6 1647 aa10.69□□□□□ -0.7
RN7SKP229-201ENST00000410465 UHRF1BP1LA0JNW5 1464 aa10.69□□□□□ -0.7
RN7SKP229-201ENST00000410465 TNIKQ9UKE5 1360 aa10.69□□□□□ -0.7
RN7SKP229-201ENST00000410465 PLPPR3Q6T4P5 718 aa10.68□□□□□ -0.7
RN7SKP229-201ENST00000410465 UACAQ9BZF9 1416 aa10.67□□□□□ -0.7
RN7SKP229-201ENST00000410465 KDM5BQ9UGL1 1544 aa10.67□□□□□ -0.7
RN7SKP229-201ENST00000410465 MAGI3Q5TCQ9 1506 aa10.66□□□□□ -0.7
RN7SKP229-201ENST00000410465 BCORL1Q5H9F3 1711 aa10.66□□□□□ -0.7
RN7SKP229-201ENST00000410465 CD109Q6YHK3 1445 aa10.66□□□□□ -0.7
RN7SKP229-201ENST00000410465 ZCCHC11Q5TAX3 1644 aaKnown RBP10.65□□□□□ -0.7
RN7SKP229-201ENST00000410465 RIMS1Q86UR5 1692 aaKnown RBP10.63□□□□□ -0.71
RN7SKP229-201ENST00000410465 ARID4BQ4LE39 1312 aaPredicted RBP10.63□□□□□ -0.71
RN7SKP229-201ENST00000410465 CARMIL2Q6F5E8 1435 aa10.63□□□□□ -0.71
RN7SKP229-201ENST00000410465 BIVM-ERCC5R4GMW8 1640 aa10.62□□□□□ -0.71
RN7SKP229-201ENST00000410465 WDR7Q9Y4E6 1490 aa10.62□□□□□ -0.71
RN7SKP229-201ENST00000410465 KCNH8Q96L42 1107 aa10.62□□□□□ -0.71
RN7SKP229-201ENST00000410465 CFAP43Q8NDM7 1665 aa10.6□□□□□ -0.71
RN7SKP229-201ENST00000410465 ARAP3Q8WWN8 1544 aa10.59□□□□□ -0.71
RN7SKP229-201ENST00000410465 RAPGEF3O95398 923 aa10.58□□□□□ -0.72
RN7SKP229-201ENST00000410465 YEATS2Q9ULM3 1422 aa10.55□□□□□ -0.72
RN7SKP229-201ENST00000410465 STRCQ7RTU9 1775 aa10.54□□□□□ -0.72
RN7SKP229-201ENST00000410465 IGF1RP08069 1367 aa10.54□□□□□ -0.72
RN7SKP229-201ENST00000410465 DISP1Q96F81 1524 aa10.54□□□□□ -0.72
RN7SKP229-201ENST00000410465 DMRT2Q9Y5R5 561 aa10.53□□□□□ -0.72
RN7SKP229-201ENST00000410465 LTBP4Q8N2S1 1624 aa10.51□□□□□ -0.73
RN7SKP229-201ENST00000410465 IQGAP2Q13576 1575 aa10.5□□□□□ -0.73
RN7SKP229-201ENST00000410465 MED1Q15648 1581 aaPredicted RBP10.5□□□□□ -0.73
RN7SKP229-201ENST00000410465 FRMPD1Q5SYB0 1578 aa10.48□□□□□ -0.73
RN7SKP229-201ENST00000410465 IQSEC2Q5JU85 1478 aa10.48□□□□□ -0.73
RN7SKP229-201ENST00000410465 UBAP1LF5GYI3 381 aa10.47□□□□□ -0.73
RN7SKP229-201ENST00000410465 MLECQ14165 292 aa10.47□□□□□ -0.73
RN7SKP229-201ENST00000410465 CEBPAP49715 358 aaPredicted RBP10.46□□□□□ -0.73
RN7SKP229-201ENST00000410465 PHLDB1Q86UU1 1377 aa10.46□□□□□ -0.74
RN7SKP229-201ENST00000410465 PTPRTO14522 1441 aa10.46□□□□□ -0.74
RN7SKP229-201ENST00000410465 PREX1Q8TCU6 1659 aa10.46□□□□□ -0.74
RN7SKP229-201ENST00000410465 SIGLEC1Q9BZZ2 1709 aa10.45□□□□□ -0.74
RN7SKP229-201ENST00000410465 ARHGEF40Q8TER5 1519 aa10.45□□□□□ -0.74
RN7SKP229-201ENST00000410465 CARMIL1Q5VZK9 1371 aa10.44□□□□□ -0.74
RN7SKP229-201ENST00000410465 KIAA0556O60303 1618 aa10.44□□□□□ -0.74
RN7SKP229-201ENST00000410465 TTC37Q6PGP7 1564 aa10.43□□□□□ -0.74
RN7SKP229-201ENST00000410465 POGZQ7Z3K3 1410 aa10.43□□□□□ -0.74
RN7SKP229-201ENST00000410465 FER1L4A9Z1Z3 1794 aa10.43□□□□□ -0.74
RN7SKP229-201ENST00000410465 HSPA1LP34931 641 aa10.42□□□□□ -0.74
RN7SKP229-201ENST00000410465 PHF23Q9BUL5 403 aaPredicted RBP10.42□□□□□ -0.74
RN7SKP229-201ENST00000410465 UGGT2Q9NYU1 1516 aa10.42□□□□□ -0.74
RN7SKP229-201ENST00000410465 FANCAO15360 1455 aa10.42□□□□□ -0.74
RN7SKP229-201ENST00000410465 NEO1Q92859 1461 aa10.41□□□□□ -0.74
RN7SKP229-201ENST00000410465 KIF27Q86VH2 1401 aa10.41□□□□□ -0.74
RN7SKP229-201ENST00000410465 ARID3CA6NKF2 412 aa10.4□□□□□ -0.74
RN7SKP229-201ENST00000410465 ABCA9Q8IUA7 1624 aa10.39□□□□□ -0.75
RN7SKP229-201ENST00000410465 UHRF1BP1Q6BDS2 1440 aa10.39□□□□□ -0.75
RN7SKP229-201ENST00000410465 ABCA8O94911 1581 aa10.39□□□□□ -0.75
RN7SKP229-201ENST00000410465 AKNAQ7Z591 1439 aa10.38□□□□□ -0.75
RN7SKP229-201ENST00000410465 SETD1BQ9UPS6 1966 aaKnown RBP10.37□□□□□ -0.75
RN7SKP229-201ENST00000410465 ZNF335Q9H4Z2 1342 aaPredicted RBP10.36□□□□□ -0.75
RN7SKP229-201ENST00000410465 SCAF1Q9H7N4 1312 aaKnown RBP10.36□□□□□ -0.75
RN7SKP229-201ENST00000410465 RICTORQ6R327 1708 aa10.36□□□□□ -0.75
RN7SKP229-201ENST00000410465 DENND4BO75064 1496 aaPredicted RBP10.36□□□□□ -0.75
RN7SKP229-201ENST00000410465 ARHGEF12Q9NZN5 1544 aa10.34□□□□□ -0.75
RN7SKP229-201ENST00000410465 PIP4K2BP78356 416 aa10.34□□□□□ -0.75
RN7SKP229-201ENST00000410465 FHOD3Q2V2M9 1422 aa10.33□□□□□ -0.76
RN7SKP229-201ENST00000410465 ZFYVE16Q7Z3T8 1539 aa10.33□□□□□ -0.76
RN7SKP229-201ENST00000410465 ATP10BO94823 1461 aa10.32□□□□□ -0.76
RN7SKP229-201ENST00000410465 NCOA1Q15788 1441 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms