RNA–Protein interactions for RNA: ENST00000409953.5

UBE2F-204, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3 BASIC

Gene UBE2F, Length 924 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-204ENST00000409953 TOP2AP11388 1531 aaKnown RBP14□□□□□ -0.17
UBE2F-204ENST00000409953 CEP170Q5SW79 1584 aa13.99□□□□□ -0.17
UBE2F-204ENST00000409953 TSPOAP1O95153 1857 aa13.97□□□□□ -0.17
UBE2F-204ENST00000409953 PIAS4Q8N2W9 510 aaPredicted RBP13.97□□□□□ -0.17
UBE2F-204ENST00000409953 MAPKBP1O60336 1514 aa13.96□□□□□ -0.17
UBE2F-204ENST00000409953 NPM1P06748 294 aaKnown RBP eCLIP13.9□□□□□ -0.18
UBE2F-204ENST00000409953 SHROOM2Q13796 1616 aa13.89□□□□□ -0.19
UBE2F-204ENST00000409953 SPATA31D1Q6ZQQ2 1576 aa13.88□□□□□ -0.19
UBE2F-204ENST00000409953 PBRM1Q86U86 1689 aa13.88□□□□□ -0.19
UBE2F-204ENST00000409953 FGD5Q6ZNL6 1462 aa13.87□□□□□ -0.19
UBE2F-204ENST00000409953 CCDC88BA6NC98 1476 aa13.84□□□□□ -0.19
UBE2F-204ENST00000409953 GRIN2AQ12879 1464 aa13.84□□□□□ -0.19
UBE2F-204ENST00000409953 NUP160Q12769 1436 aa13.83□□□□□ -0.2
UBE2F-204ENST00000409953 TOP2BQ02880 1626 aa13.82□□□□□ -0.2
UBE2F-204ENST00000409953 PRG4Q92954 1404 aaPredicted RBP13.8□□□□□ -0.2
UBE2F-204ENST00000409953 ADCY10Q96PN6 1610 aa13.79□□□□□ -0.2
UBE2F-204ENST00000409953 PPRC1Q5VV67 1664 aaKnown RBP13.76□□□□□ -0.21
UBE2F-204ENST00000409953 COL17A1Q9UMD9 1497 aaPredicted RBP13.76□□□□□ -0.21
UBE2F-204ENST00000409953 CERKQ8TCT0 537 aa13.74□□□□□ -0.21
UBE2F-204ENST00000409953 ABCA5Q8WWZ7 1642 aa13.72□□□□□ -0.21
UBE2F-204ENST00000409953 ADAMTS12P58397 1594 aa13.7□□□□□ -0.22
UBE2F-204ENST00000409953 CUX1P39880 1505 aa13.67□□□□□ -0.22
UBE2F-204ENST00000409953 PCF11O94913 1555 aaKnown RBP13.66□□□□□ -0.22
UBE2F-204ENST00000409953 MSH5O43196 834 aa13.65□□□□□ -0.22
UBE2F-204ENST00000409953 JPH4Q96JJ6 628 aa13.65□□□□□ -0.22
UBE2F-204ENST00000409953 GLI2P10070 1586 aa13.64□□□□□ -0.23
UBE2F-204ENST00000409953 ABCA10Q8WWZ4 1543 aa13.62□□□□□ -0.23
UBE2F-204ENST00000409953 PTPRMP28827 1452 aa13.61□□□□□ -0.23
UBE2F-204ENST00000409953 FHAD1B1AJZ9 1412 aa13.6□□□□□ -0.23
UBE2F-204ENST00000409953 TEX14Q8IWB6 1497 aa13.59□□□□□ -0.23
UBE2F-204ENST00000409953 KIF21BO75037 1637 aa13.57□□□□□ -0.24
UBE2F-204ENST00000409953 ASXL2Q76L83 1435 aa13.57□□□□□ -0.24
UBE2F-204ENST00000409953 PLB1Q6P1J6 1458 aa13.56□□□□□ -0.24
UBE2F-204ENST00000409953 RUSC2Q8N2Y8 1516 aa13.54□□□□□ -0.24
UBE2F-204ENST00000409953 MAP3K4Q9Y6R4 1608 aa13.53□□□□□ -0.24
UBE2F-204ENST00000409953 HSPA2P54652 639 aa13.52□□□□□ -0.25
UBE2F-204ENST00000409953 ADAMTSL3P82987 1691 aa13.5□□□□□ -0.25
UBE2F-204ENST00000409953 ABCC2Q92887 1545 aa13.5□□□□□ -0.25
UBE2F-204ENST00000409953 EPRSP07814 1512 aaKnown RBP13.48□□□□□ -0.25
UBE2F-204ENST00000409953 KIAA0586Q9BVV6 1533 aa13.45□□□□□ -0.26
UBE2F-204ENST00000409953 CUL7Q14999 1698 aa13.44□□□□□ -0.26
UBE2F-204ENST00000409953 ERICH3Q5RHP9 1530 aa13.43□□□□□ -0.26
UBE2F-204ENST00000409953 PTPRGP23470 1445 aa13.42□□□□□ -0.26
UBE2F-204ENST00000409953 TTBK1Q5TCY1 1321 aaPredicted RBP13.41□□□□□ -0.26
UBE2F-204ENST00000409953 MADDQ8WXG6 1647 aa13.41□□□□□ -0.26
UBE2F-204ENST00000409953 PPP4R3CPQ6ZMV5 832 aa13.37□□□□□ -0.27
UBE2F-204ENST00000409953 BCORL1Q5H9F3 1711 aa13.36□□□□□ -0.27
UBE2F-204ENST00000409953 WRNQ14191 1432 aaPredicted RBP eCLIP13.35□□□□□ -0.27
UBE2F-204ENST00000409953 UHRF1BP1LA0JNW5 1464 aa13.34□□□□□ -0.27
UBE2F-204ENST00000409953 RIMS1Q86UR5 1692 aaKnown RBP13.33□□□□□ -0.28
UBE2F-204ENST00000409953 MAGI3Q5TCQ9 1506 aa13.32□□□□□ -0.28
UBE2F-204ENST00000409953 TNIKQ9UKE5 1360 aa13.31□□□□□ -0.28
UBE2F-204ENST00000409953 ARID4BQ4LE39 1312 aaPredicted RBP13.3□□□□□ -0.28
UBE2F-204ENST00000409953 KDM5BQ9UGL1 1544 aa13.29□□□□□ -0.28
UBE2F-204ENST00000409953 CD109Q6YHK3 1445 aa13.29□□□□□ -0.28
UBE2F-204ENST00000409953 UACAQ9BZF9 1416 aa13.29□□□□□ -0.28
UBE2F-204ENST00000409953 MED1Q15648 1581 aaPredicted RBP13.28□□□□□ -0.28
UBE2F-204ENST00000409953 ZCCHC11Q5TAX3 1644 aaKnown RBP13.27□□□□□ -0.29
UBE2F-204ENST00000409953 WDR7Q9Y4E6 1490 aa13.26□□□□□ -0.29
UBE2F-204ENST00000409953 CFAP43Q8NDM7 1665 aa13.25□□□□□ -0.29
UBE2F-204ENST00000409953 YEATS2Q9ULM3 1422 aa13.25□□□□□ -0.29
UBE2F-204ENST00000409953 DMRT2Q9Y5R5 561 aa13.25□□□□□ -0.29
UBE2F-204ENST00000409953 ARAP3Q8WWN8 1544 aa13.24□□□□□ -0.29
UBE2F-204ENST00000409953 IQSEC2Q5JU85 1478 aa13.24□□□□□ -0.29
UBE2F-204ENST00000409953 CARMIL2Q6F5E8 1435 aa13.23□□□□□ -0.29
UBE2F-204ENST00000409953 LTBP4Q8N2S1 1624 aa13.21□□□□□ -0.3
UBE2F-204ENST00000409953 STRCQ7RTU9 1775 aa13.2□□□□□ -0.3
UBE2F-204ENST00000409953 SCAF1Q9H7N4 1312 aaKnown RBP13.19□□□□□ -0.3
UBE2F-204ENST00000409953 KCNA4P22459 653 aa13.19□□□□□ -0.3
UBE2F-204ENST00000409953 UBAP1LF5GYI3 381 aa13.16□□□□□ -0.3
UBE2F-204ENST00000409953 RAPGEF3O95398 923 aa13.15□□□□□ -0.3
UBE2F-204ENST00000409953 KCNH8Q96L42 1107 aa13.15□□□□□ -0.3
UBE2F-204ENST00000409953 PREX1Q8TCU6 1659 aa13.15□□□□□ -0.31
UBE2F-204ENST00000409953 PTPRTO14522 1441 aa13.14□□□□□ -0.31
UBE2F-204ENST00000409953 BIVM-ERCC5R4GMW8 1640 aa13.14□□□□□ -0.31
UBE2F-204ENST00000409953 ARHGEF40Q8TER5 1519 aa13.11□□□□□ -0.31
UBE2F-204ENST00000409953 FRMPD1Q5SYB0 1578 aa13.1□□□□□ -0.31
UBE2F-204ENST00000409953 TTC37Q6PGP7 1564 aa13.1□□□□□ -0.31
UBE2F-204ENST00000409953 POGZQ7Z3K3 1410 aa13.09□□□□□ -0.31
UBE2F-204ENST00000409953 HSPA1LP34931 641 aa13.08□□□□□ -0.32
UBE2F-204ENST00000409953 NCBP3Q53F19 620 aaKnown RBP13.08□□□□□ -0.32
UBE2F-204ENST00000409953 DISP1Q96F81 1524 aa13.08□□□□□ -0.32
UBE2F-204ENST00000409953 PHLDB1Q86UU1 1377 aa13.07□□□□□ -0.32
UBE2F-204ENST00000409953 FANCAO15360 1455 aa13.07□□□□□ -0.32
UBE2F-204ENST00000409953 FER1L4A9Z1Z3 1794 aa13.07□□□□□ -0.32
UBE2F-204ENST00000409953 IQGAP2Q13576 1575 aa13.05□□□□□ -0.32
UBE2F-204ENST00000409953 UHRF1BP1Q6BDS2 1440 aa13.05□□□□□ -0.32
UBE2F-204ENST00000409953 MLECQ14165 292 aa13.03□□□□□ -0.32
UBE2F-204ENST00000409953 SIGLEC1Q9BZZ2 1709 aa13.01□□□□□ -0.33
UBE2F-204ENST00000409953 NEO1Q92859 1461 aa13□□□□□ -0.33
UBE2F-204ENST00000409953 CNKSR2Q8WXI2 1034 aa13□□□□□ -0.33
UBE2F-204ENST00000409953 CEBPAP49715 358 aaPredicted RBP12.99□□□□□ -0.33
UBE2F-204ENST00000409953 AKNAQ7Z591 1439 aa12.98□□□□□ -0.33
UBE2F-204ENST00000409953 IGF1RP08069 1367 aa12.98□□□□□ -0.33
UBE2F-204ENST00000409953 ZNF335Q9H4Z2 1342 aaPredicted RBP12.97□□□□□ -0.33
UBE2F-204ENST00000409953 KIAA0556O60303 1618 aa12.96□□□□□ -0.33
UBE2F-204ENST00000409953 PIP4K2BP78356 416 aa12.96□□□□□ -0.33
UBE2F-204ENST00000409953 MAPK8IP2Q13387 824 aaPredicted RBP12.95□□□□□ -0.34
UBE2F-204ENST00000409953 ABCA9Q8IUA7 1624 aa12.95□□□□□ -0.34
UBE2F-204ENST00000409953 ARHGEF12Q9NZN5 1544 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms