RNA–Protein interactions for RNA: ENST00000409879.6

RUBCNL-206, Transcript of RUN and cysteine rich domain containing beclin 1 interacting protein like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RUBCNL, Length 2,997 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUBCNL-206ENST00000409879 KCNH8Q96L42 1107 aa13.52□□□□□ -0.25
RUBCNL-206ENST00000409879 CUX2O14529 1486 aa13.51□□□□□ -0.25
RUBCNL-206ENST00000409879 BCANQ96GW7 911 aa13.49□□□□□ -0.25
RUBCNL-206ENST00000409879 ERICH3Q5RHP9 1530 aa13.49□□□□□ -0.25
RUBCNL-206ENST00000409879 CCNB3Q8WWL7 1395 aa13.49□□□□□ -0.25
RUBCNL-206ENST00000409879 PRXQ9BXM0 1461 aa13.48□□□□□ -0.25
RUBCNL-206ENST00000409879 FKBP8Q14318 412 aa13.48□□□□□ -0.25
RUBCNL-206ENST00000409879 TOP2BQ02880 1626 aa13.46□□□□□ -0.25
RUBCNL-206ENST00000409879 ITGAEP38570 1179 aa13.46□□□□□ -0.25
RUBCNL-206ENST00000409879 BCL11AQ9H165 835 aa13.44□□□□□ -0.26
RUBCNL-206ENST00000409879 NEFLP07196 543 aa13.43□□□□□ -0.26
RUBCNL-206ENST00000409879 DDX10Q13206 875 aaKnown RBP13.42□□□□□ -0.26
RUBCNL-206ENST00000409879 KLHL34Q8N239 644 aa13.42□□□□□ -0.26
RUBCNL-206ENST00000409879 NCAPD3P42695 1498 aa13.42□□□□□ -0.26
RUBCNL-206ENST00000409879 RAB3GAP2Q9H2M9 1393 aa13.42□□□□□ -0.26
RUBCNL-206ENST00000409879 NPM3O75607 178 aaKnown RBP13.41□□□□□ -0.26
RUBCNL-206ENST00000409879 HMGXB3Q12766 1538 aa13.4□□□□□ -0.26
RUBCNL-206ENST00000409879 RBM19Q9Y4C8 960 aaKnown RBP13.39□□□□□ -0.27
RUBCNL-206ENST00000409879 MAPKBP1O60336 1514 aa13.38□□□□□ -0.27
RUBCNL-206ENST00000409879 BIVM-ERCC5R4GMW8 1640 aa13.38□□□□□ -0.27
RUBCNL-206ENST00000409879 EIF5BO60841 1220 aaKnown RBP13.37□□□□□ -0.27
RUBCNL-206ENST00000409879 PPP1R15AO75807 674 aaPredicted RBP13.36□□□□□ -0.27
RUBCNL-206ENST00000409879 KIF27Q86VH2 1401 aa13.36□□□□□ -0.27
RUBCNL-206ENST00000409879 SETD5Q9C0A6 1442 aa13.35□□□□□ -0.27
RUBCNL-206ENST00000409879 ARHGAP35Q9NRY4 1499 aa13.35□□□□□ -0.27
RUBCNL-206ENST00000409879 CCER2I3L3R5 266 aa13.35□□□□□ -0.27
RUBCNL-206ENST00000409879 TAOK2Q9UL54 1235 aa13.35□□□□□ -0.27
RUBCNL-206ENST00000409879 SIN3AQ96ST3 1273 aa13.33□□□□□ -0.28
RUBCNL-206ENST00000409879 WDR97A6NE52 1622 aa13.33□□□□□ -0.28
RUBCNL-206ENST00000409879 ANP32CO43423 234 aa13.32□□□□□ -0.28
RUBCNL-206ENST00000409879 TRIM52Q96A61 297 aa13.32□□□□□ -0.28
RUBCNL-206ENST00000409879 CUX1P39880 1505 aa13.31□□□□□ -0.28
RUBCNL-206ENST00000409879 CFTRP13569 1480 aa13.29□□□□□ -0.28
RUBCNL-206ENST00000409879 FAM50AQ14320 339 aaKnown RBP13.27□□□□□ -0.29
RUBCNL-206ENST00000409879 MAP3K1Q13233 1512 aa13.27□□□□□ -0.29
RUBCNL-206ENST00000409879 HIRIP3Q9BW71 556 aaPredicted RBP13.26□□□□□ -0.29
RUBCNL-206ENST00000409879 TIAM1Q13009 1591 aa13.25□□□□□ -0.29
RUBCNL-206ENST00000409879 PHLDB1Q86UU1 1377 aa13.24□□□□□ -0.29
RUBCNL-206ENST00000409879 LRRC9Q6ZRR7 1453 aa13.23□□□□□ -0.29
RUBCNL-206ENST00000409879 PODXL2Q9NZ53 605 aa13.23□□□□□ -0.29
RUBCNL-206ENST00000409879 TPRNQ4KMQ1 711 aa13.23□□□□□ -0.29
RUBCNL-206ENST00000409879 MSH5O43196 834 aa13.22□□□□□ -0.29
RUBCNL-206ENST00000409879 HOMEZQ8IX15 550 aa13.2□□□□□ -0.3
RUBCNL-206ENST00000409879 FANCIQ9NVI1 1328 aa13.19□□□□□ -0.3
RUBCNL-206ENST00000409879 CDK11AQ9UQ88 783 aaPredicted RBP13.19□□□□□ -0.3
RUBCNL-206ENST00000409879 CADPSQ9ULU8 1353 aa13.19□□□□□ -0.3
RUBCNL-206ENST00000409879 CC2D2AQ9P2K1 1620 aa13.19□□□□□ -0.3
RUBCNL-206ENST00000409879 IGF1RP08069 1367 aa13.18□□□□□ -0.3
RUBCNL-206ENST00000409879 TONSLQ96HA7 1378 aa13.16□□□□□ -0.3
RUBCNL-206ENST00000409879 FHAD1B1AJZ9 1412 aa13.16□□□□□ -0.3
RUBCNL-206ENST00000409879 PLEKHG5O94827 1062 aa13.16□□□□□ -0.3
RUBCNL-206ENST00000409879 HNRNPUQ00839 825 aaKnown RBP eCLIP13.15□□□□□ -0.3
RUBCNL-206ENST00000409879 ATP1B4Q9UN42 357 aaPredicted RBP13.14□□□□□ -0.31
RUBCNL-206ENST00000409879 PRDM2Q13029 1718 aa13.14□□□□□ -0.31
RUBCNL-206ENST00000409879 CARMIL1Q5VZK9 1371 aa13.14□□□□□ -0.31
RUBCNL-206ENST00000409879 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.12□□□□□ -0.31
RUBCNL-206ENST00000409879 IRX6P78412 446 aaPredicted RBP13.11□□□□□ -0.31
RUBCNL-206ENST00000409879 FGD5Q6ZNL6 1462 aa13.11□□□□□ -0.31
RUBCNL-206ENST00000409879 ERICH6BQ5W0A0 696 aa13.11□□□□□ -0.31
RUBCNL-206ENST00000409879 P3H3Q8IVL6 736 aa13.1□□□□□ -0.31
RUBCNL-206ENST00000409879 FANCD2Q9BXW9 1451 aa13.08□□□□□ -0.32
RUBCNL-206ENST00000409879 CFAP43Q8NDM7 1665 aa13.08□□□□□ -0.32
RUBCNL-206ENST00000409879 NESP48681 1621 aa13.07□□□□□ -0.32
RUBCNL-206ENST00000409879 PPP4R2Q9NY27 417 aa13.07□□□□□ -0.32
RUBCNL-206ENST00000409879 MYT1LQ9UL68 1186 aa13.07□□□□□ -0.32
RUBCNL-206ENST00000409879 PCF11O94913 1555 aaKnown RBP13.06□□□□□ -0.32
RUBCNL-206ENST00000409879 UACAQ9BZF9 1416 aa13.05□□□□□ -0.32
RUBCNL-206ENST00000409879 CCDC18Q5T9S5 1454 aa13.04□□□□□ -0.32
RUBCNL-206ENST00000409879 FGD6Q6ZV73 1430 aa13.02□□□□□ -0.32
RUBCNL-206ENST00000409879 FYCO1Q9BQS8 1478 aa13.02□□□□□ -0.32
RUBCNL-206ENST00000409879 RAD54L2Q9Y4B4 1467 aa13.02□□□□□ -0.32
RUBCNL-206ENST00000409879 PIAS4Q8N2W9 510 aaPredicted RBP13.02□□□□□ -0.33
RUBCNL-206ENST00000409879 HFM1A2PYH4 1435 aa13.02□□□□□ -0.33
RUBCNL-206ENST00000409879 FHOD3Q2V2M9 1422 aa13.02□□□□□ -0.33
RUBCNL-206ENST00000409879 CASKIN1Q8WXD9 1431 aa13.01□□□□□ -0.33
RUBCNL-206ENST00000409879 WASHC2AQ641Q2 1341 aa13□□□□□ -0.33
RUBCNL-206ENST00000409879 DNAJC5BQ9UF47 199 aa12.99□□□□□ -0.33
RUBCNL-206ENST00000409879 HSPA5P11021 654 aaKnown RBP12.99□□□□□ -0.33
RUBCNL-206ENST00000409879 AQRO60306 1485 aaKnown RBP eCLIP12.99□□□□□ -0.33
RUBCNL-206ENST00000409879 FOXD4L1Q9NU39 408 aa12.99□□□□□ -0.33
RUBCNL-206ENST00000409879 PTPRKQ15262 1439 aa12.98□□□□□ -0.33
RUBCNL-206ENST00000409879 TOPBP1Q92547 1522 aa12.97□□□□□ -0.33
RUBCNL-206ENST00000409879 POLA1P09884 1462 aaPredicted RBP12.97□□□□□ -0.33
RUBCNL-206ENST00000409879 EIF4G2P78344 907 aaKnown RBP eCLIP12.96□□□□□ -0.33
RUBCNL-206ENST00000409879 B4GALNT3Q6L9W6 998 aa12.96□□□□□ -0.33
RUBCNL-206ENST00000409879 MTUS2Q5JR59 1369 aa12.96□□□□□ -0.33
RUBCNL-206ENST00000409879 DNMBPQ6XZF7 1577 aa12.96□□□□□ -0.33
RUBCNL-206ENST00000409879 NAIPQ13075 1403 aa12.96□□□□□ -0.33
RUBCNL-206ENST00000409879 EFCAB5A4FU69 1503 aa12.96□□□□□ -0.33
RUBCNL-206ENST00000409879 PTPN23Q9H3S7 1636 aa12.96□□□□□ -0.33
RUBCNL-206ENST00000409879 DEKP35659 375 aaKnown RBP12.96□□□□□ -0.34
RUBCNL-206ENST00000409879 KDM5BQ9UGL1 1544 aa12.95□□□□□ -0.34
RUBCNL-206ENST00000409879 CCDC184Q52MB2 194 aa12.95□□□□□ -0.34
RUBCNL-206ENST00000409879 FAM9BQ8IZU0 186 aa12.94□□□□□ -0.34
RUBCNL-206ENST00000409879 FMN1Q68DA7 1419 aa12.94□□□□□ -0.34
RUBCNL-206ENST00000409879 CNTLNQ9NXG0 1405 aa12.93□□□□□ -0.34
RUBCNL-206ENST00000409879 ZBED9Q6R2W3 1325 aa12.93□□□□□ -0.34
RUBCNL-206ENST00000409879 PRKRIP1Q9H875 184 aaPredicted RBP12.93□□□□□ -0.34
RUBCNL-206ENST00000409879 MRS2Q9HD23 443 aa12.92□□□□□ -0.34
RUBCNL-206ENST00000409879 NCOA2Q15596 1464 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms