RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 ARAP1Q96P48 1450 aa27.33■■□□□ 1.97
TSPAN4-208ENST00000409531 JPH4Q96JJ6 628 aa27.32■■□□□ 1.96
TSPAN4-208ENST00000409531 KIAA0586Q9BVV6 1533 aa27.23■■□□□ 1.95
TSPAN4-208ENST00000409531 FAM9AQ8IZU1 332 aaPredicted RBP27.23■■□□□ 1.95
TSPAN4-208ENST00000409531 CSRNP3Q8WYN3 585 aa27.23■■□□□ 1.95
TSPAN4-208ENST00000409531 SHROOM2Q13796 1616 aa27.22■■□□□ 1.95
TSPAN4-208ENST00000409531 RAPGEF2Q9Y4G8 1499 aa27.2■■□□□ 1.94
TSPAN4-208ENST00000409531 PRG4Q92954 1404 aaPredicted RBP27.19■■□□□ 1.94
TSPAN4-208ENST00000409531 ERCC6L2Q5T890 1561 aa27.18■■□□□ 1.94
TSPAN4-208ENST00000409531 PRXQ9BXM0 1461 aa27.1■■□□□ 1.93
TSPAN4-208ENST00000409531 KIF21BO75037 1637 aa27.07■■□□□ 1.92
TSPAN4-208ENST00000409531 IQGAP2Q13576 1575 aa27■■□□□ 1.91
TSPAN4-208ENST00000409531 AEBP2Q6ZN18 517 aaPredicted RBP26.98■■□□□ 1.91
TSPAN4-208ENST00000409531 CARMIL2Q6F5E8 1435 aa26.96■■□□□ 1.91
TSPAN4-208ENST00000409531 GOLGA3Q08378 1498 aa26.95■■□□□ 1.9
TSPAN4-208ENST00000409531 PTPRGP23470 1445 aa26.89■■□□□ 1.89
TSPAN4-208ENST00000409531 UGGT2Q9NYU1 1516 aa26.88■■□□□ 1.89
TSPAN4-208ENST00000409531 TNIKQ9UKE5 1360 aa26.88■■□□□ 1.89
TSPAN4-208ENST00000409531 DISP1Q96F81 1524 aa26.85■■□□□ 1.89
TSPAN4-208ENST00000409531 CTTNBP2Q8WZ74 1663 aa26.85■■□□□ 1.89
TSPAN4-208ENST00000409531 TTBK1Q5TCY1 1321 aaPredicted RBP26.84■■□□□ 1.89
TSPAN4-208ENST00000409531 NPM1P06748 294 aaKnown RBP eCLIP26.81■■□□□ 1.88
TSPAN4-208ENST00000409531 UBTFP17480 764 aaKnown RBP26.81■■□□□ 1.88
TSPAN4-208ENST00000409531 EHMT2Q96KQ7 1210 aa26.81■■□□□ 1.88
TSPAN4-208ENST00000409531 KIAA0556O60303 1618 aa26.73■■□□□ 1.87
TSPAN4-208ENST00000409531 LOC105371045A0A1W2PR82 267 aa26.71■■□□□ 1.87
TSPAN4-208ENST00000409531 ADCY10Q96PN6 1610 aa26.7■■□□□ 1.87
TSPAN4-208ENST00000409531 UACAQ9BZF9 1416 aa26.67■■□□□ 1.86
TSPAN4-208ENST00000409531 P3H3Q8IVL6 736 aa26.64■■□□□ 1.85
TSPAN4-208ENST00000409531 UHRF1BP1LA0JNW5 1464 aa26.63■■□□□ 1.85
TSPAN4-208ENST00000409531 RANGAP1P46060 587 aaPredicted RBP26.61■■□□□ 1.85
TSPAN4-208ENST00000409531 ABCC2Q92887 1545 aa26.6■■□□□ 1.85
TSPAN4-208ENST00000409531 MAPKBP1O60336 1514 aa26.58■■□□□ 1.85
TSPAN4-208ENST00000409531 PLB1Q6P1J6 1458 aa26.53■■□□□ 1.84
TSPAN4-208ENST00000409531 SAMD9Q5K651 1589 aa26.52■■□□□ 1.84
TSPAN4-208ENST00000409531 FAM69CQ0P6D2 419 aa26.52■■□□□ 1.84
TSPAN4-208ENST00000409531 ABCC10Q5T3U5 1492 aa26.51■■□□□ 1.83
TSPAN4-208ENST00000409531 EFCAB5A4FU69 1503 aa26.51■■□□□ 1.83
TSPAN4-208ENST00000409531 KDM5BQ9UGL1 1544 aa26.5■■□□□ 1.83
TSPAN4-208ENST00000409531 CEP162Q5TB80 1403 aa26.48■■□□□ 1.83
TSPAN4-208ENST00000409531 ABCA8O94911 1581 aa26.47■■□□□ 1.83
TSPAN4-208ENST00000409531 CLIP1P30622 1438 aa26.46■■□□□ 1.83
TSPAN4-208ENST00000409531 ASXL2Q76L83 1435 aa26.45■■□□□ 1.82
TSPAN4-208ENST00000409531 FHOD3Q2V2M9 1422 aa26.41■■□□□ 1.82
TSPAN4-208ENST00000409531 KIF13AQ9H1H9 1805 aa26.41■■□□□ 1.82
TSPAN4-208ENST00000409531 ARHGAP35Q9NRY4 1499 aa26.39■■□□□ 1.82
TSPAN4-208ENST00000409531 DIP2BQ9P265 1576 aa26.39■■□□□ 1.82
TSPAN4-208ENST00000409531 ZCCHC11Q5TAX3 1644 aaKnown RBP26.38■■□□□ 1.81
TSPAN4-208ENST00000409531 ARID3CA6NKF2 412 aa26.33■■□□□ 1.81
TSPAN4-208ENST00000409531 ATP10BO94823 1461 aa26.32■■□□□ 1.8
TSPAN4-208ENST00000409531 RAPGEF6Q8TEU7 1601 aa26.3■■□□□ 1.8
TSPAN4-208ENST00000409531 WDR7Q9Y4E6 1490 aa26.28■■□□□ 1.8
TSPAN4-208ENST00000409531 EPRSP07814 1512 aaKnown RBP26.28■■□□□ 1.8
TSPAN4-208ENST00000409531 GLI2P10070 1586 aa26.27■■□□□ 1.8
TSPAN4-208ENST00000409531 KCNH8Q96L42 1107 aa26.27■■□□□ 1.8
TSPAN4-208ENST00000409531 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.26■■□□□ 1.79
TSPAN4-208ENST00000409531 HNRNPUL2Q1KMD3 747 aaKnown RBP26.26■■□□□ 1.79
TSPAN4-208ENST00000409531 FMN1Q68DA7 1419 aa26.25■■□□□ 1.79
TSPAN4-208ENST00000409531 NUP153P49790 1475 aaKnown RBP26.23■■□□□ 1.79
TSPAN4-208ENST00000409531 ATP1B4Q9UN42 357 aaPredicted RBP26.17■■□□□ 1.78
TSPAN4-208ENST00000409531 PLEKHD1A6NEE1 506 aa26.16■■□□□ 1.78
TSPAN4-208ENST00000409531 TSPOAP1O95153 1857 aa26.16■■□□□ 1.78
TSPAN4-208ENST00000409531 VPS8Q8N3P4 1428 aa26.14■■□□□ 1.77
TSPAN4-208ENST00000409531 MAP3K4Q9Y6R4 1608 aa26.11■■□□□ 1.77
TSPAN4-208ENST00000409531 CD109Q6YHK3 1445 aa26.1■■□□□ 1.77
TSPAN4-208ENST00000409531 PCF11O94913 1555 aaKnown RBP26.07■■□□□ 1.76
TSPAN4-208ENST00000409531 CASKIN1Q8WXD9 1431 aa26.07■■□□□ 1.76
TSPAN4-208ENST00000409531 FYCO1Q9BQS8 1478 aa26.07■■□□□ 1.76
TSPAN4-208ENST00000409531 HECW1Q76N89 1606 aa26.06■■□□□ 1.76
TSPAN4-208ENST00000409531 TEX14Q8IWB6 1497 aa26.06■■□□□ 1.76
TSPAN4-208ENST00000409531 PPRC1Q5VV67 1664 aaKnown RBP26.05■■□□□ 1.76
TSPAN4-208ENST00000409531 CDK11AQ9UQ88 783 aaPredicted RBP26.04■■□□□ 1.76
TSPAN4-208ENST00000409531 MAGI3Q5TCQ9 1506 aa26.03■■□□□ 1.76
TSPAN4-208ENST00000409531 CFAP43Q8NDM7 1665 aa26.02■■□□□ 1.76
TSPAN4-208ENST00000409531 CDK13Q14004 1512 aaKnown RBP26.02■■□□□ 1.76
TSPAN4-208ENST00000409531 KDM4FA0A1W2PPD8 638 aa26.01■■□□□ 1.75
TSPAN4-208ENST00000409531 KDM6BO15054 1643 aa26■■□□□ 1.75
TSPAN4-208ENST00000409531 ABCA9Q8IUA7 1624 aa25.96■■□□□ 1.75
TSPAN4-208ENST00000409531 CCDC18Q5T9S5 1454 aa25.95■■□□□ 1.75
TSPAN4-208ENST00000409531 COL17A1Q9UMD9 1497 aaPredicted RBP25.93■■□□□ 1.74
TSPAN4-208ENST00000409531 LRRIQ1Q96JM4 1722 aa25.92■■□□□ 1.74
TSPAN4-208ENST00000409531 APLP2Q06481 763 aa25.89■■□□□ 1.74
TSPAN4-208ENST00000409531 ILDR1Q86SU0 546 aaPredicted RBP25.89■■□□□ 1.74
TSPAN4-208ENST00000409531 PHLDB1Q86UU1 1377 aa25.89■■□□□ 1.74
TSPAN4-208ENST00000409531 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.87■■□□□ 1.73
TSPAN4-208ENST00000409531 TROQ12816 1431 aaPredicted RBP25.86■■□□□ 1.73
TSPAN4-208ENST00000409531 MAP3K1Q13233 1512 aa25.86■■□□□ 1.73
TSPAN4-208ENST00000409531 TIAM1Q13009 1591 aa25.83■■□□□ 1.73
TSPAN4-208ENST00000409531 NEO1Q92859 1461 aa25.82■■□□□ 1.72
TSPAN4-208ENST00000409531 ARAP3Q8WWN8 1544 aa25.81■■□□□ 1.72
TSPAN4-208ENST00000409531 PLCH2O75038 1416 aa25.78■■□□□ 1.72
TSPAN4-208ENST00000409531 TTC37Q6PGP7 1564 aa25.78■■□□□ 1.72
TSPAN4-208ENST00000409531 FANCAO15360 1455 aa25.75■■□□□ 1.71
TSPAN4-208ENST00000409531 KIF14Q15058 1648 aa25.74■■□□□ 1.71
TSPAN4-208ENST00000409531 AKNAQ7Z591 1439 aa25.73■■□□□ 1.71
TSPAN4-208ENST00000409531 RAPGEF3O95398 923 aa25.73■■□□□ 1.71
TSPAN4-208ENST00000409531 EFCAB2Q5VUJ9 269 aa25.73■■□□□ 1.71
TSPAN4-208ENST00000409531 MTUS2Q5JR59 1369 aa25.72■■□□□ 1.71
TSPAN4-208ENST00000409531 EHBP1L1Q8N3D4 1523 aa25.7■■□□□ 1.71
TSPAN4-208ENST00000409531 LRRC9Q6ZRR7 1453 aa25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms