RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 PTMSP20962 102 aa15.76■□□□□ 0.11
SHANK2-203ENST00000409161 MSNP26038 577 aaKnown RBP15.75■□□□□ 0.11
SHANK2-203ENST00000409161 CFAP44Q96MT7 982 aa15.75■□□□□ 0.11
SHANK2-203ENST00000409161 NOP58Q9Y2X3 529 aaKnown RBP15.75■□□□□ 0.11
SHANK2-203ENST00000409161 SALL2Q9Y467 1007 aaPredicted RBP15.75■□□□□ 0.11
SHANK2-203ENST00000409161 FTSJ3Q8IY81 847 aaKnown RBP15.74■□□□□ 0.11
SHANK2-203ENST00000409161 EIF4G2P78344 907 aaKnown RBP eCLIP15.74■□□□□ 0.11
SHANK2-203ENST00000409161 CDCA8Q53HL2 280 aa15.74■□□□□ 0.11
SHANK2-203ENST00000409161 MS4A1P11836 297 aa15.73■□□□□ 0.11
SHANK2-203ENST00000409161 CFAP53Q96M91 514 aa15.71■□□□□ 0.11
SHANK2-203ENST00000409161 CHGAP10645 457 aaKnown RBP15.7■□□□□ 0.1
SHANK2-203ENST00000409161 HSP90AB1P08238 724 aaKnown RBP15.66■□□□□ 0.1
SHANK2-203ENST00000409161 P3H3Q8IVL6 736 aa15.66■□□□□ 0.1
SHANK2-203ENST00000409161 USP35Q9P2H5 1018 aa15.66■□□□□ 0.1
SHANK2-203ENST00000409161 SCRIBQ14160 1630 aa15.65■□□□□ 0.1
SHANK2-203ENST00000409161 PPP4R2Q9NY27 417 aa15.65■□□□□ 0.1
SHANK2-203ENST00000409161 MTUS2Q5JR59 1369 aa15.64■□□□□ 0.09
SHANK2-203ENST00000409161 RSF1Q96T23 1441 aaPredicted RBP15.64■□□□□ 0.09
SHANK2-203ENST00000409161 MIER1Q8N108 512 aa15.63■□□□□ 0.09
SHANK2-203ENST00000409161 HSCBQ8IWL3 235 aa15.62■□□□□ 0.09
SHANK2-203ENST00000409161 TSPY4P0CV99 314 aa15.62■□□□□ 0.09
SHANK2-203ENST00000409161 TSPY10P0CW01 314 aa15.62■□□□□ 0.09
SHANK2-203ENST00000409161 GOLGA6L4A6NEF3 574 aa15.61■□□□□ 0.09
SHANK2-203ENST00000409161 IRX6P78412 446 aaPredicted RBP15.61■□□□□ 0.09
SHANK2-203ENST00000409161 KNSTRNQ9Y448 316 aa15.6■□□□□ 0.09
SHANK2-203ENST00000409161 PNNQ9H307 717 aaKnown RBP15.59■□□□□ 0.09
SHANK2-203ENST00000409161 MCCP23508 829 aa15.59■□□□□ 0.09
SHANK2-203ENST00000409161 ABCC9O60706 1549 aa15.59■□□□□ 0.09
SHANK2-203ENST00000409161 NPM1P06748 294 aaKnown RBP eCLIP15.58■□□□□ 0.09
SHANK2-203ENST00000409161 KIAA2012Q0VF49 1180 aa15.58■□□□□ 0.09
SHANK2-203ENST00000409161 EEA1Q15075 1411 aa15.58■□□□□ 0.08
SHANK2-203ENST00000409161 ARID3CA6NKF2 412 aa15.56■□□□□ 0.08
SHANK2-203ENST00000409161 FGD1P98174 961 aa15.56■□□□□ 0.08
SHANK2-203ENST00000409161 PLCB2Q00722 1185 aa15.56■□□□□ 0.08
SHANK2-203ENST00000409161 CLIP1P30622 1438 aa15.55■□□□□ 0.08
SHANK2-203ENST00000409161 DRC7Q8IY82 874 aa15.54■□□□□ 0.08
SHANK2-203ENST00000409161 SYAP1Q96A49 352 aaPredicted RBP15.54■□□□□ 0.08
SHANK2-203ENST00000409161 TNNT3P45378 269 aaPredicted RBP15.53■□□□□ 0.08
SHANK2-203ENST00000409161 LAS1LQ9Y4W2 734 aaKnown RBP15.53■□□□□ 0.08
SHANK2-203ENST00000409161 ARID4BQ4LE39 1312 aaPredicted RBP15.52■□□□□ 0.08
SHANK2-203ENST00000409161 MAPK8IP3Q9UPT6 1336 aa15.52■□□□□ 0.08
SHANK2-203ENST00000409161 GBP4Q96PP9 640 aa15.52■□□□□ 0.08
SHANK2-203ENST00000409161 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.52■□□□□ 0.07
SHANK2-203ENST00000409161 KDM2AQ9Y2K7 1162 aa15.51■□□□□ 0.07
SHANK2-203ENST00000409161 GOLGA6L1Q8N7Z2 621 aa15.51■□□□□ 0.07
SHANK2-203ENST00000409161 KCNJ4P48050 445 aa15.5■□□□□ 0.07
SHANK2-203ENST00000409161 SUPT16HQ9Y5B9 1047 aaKnown RBP15.5■□□□□ 0.07
SHANK2-203ENST00000409161 GOLGA3Q08378 1498 aa15.5■□□□□ 0.07
SHANK2-203ENST00000409161 RTN4Q9NQC3 1192 aaKnown RBP15.5■□□□□ 0.07
SHANK2-203ENST00000409161 NUDCQ9Y266 331 aa15.5■□□□□ 0.07
SHANK2-203ENST00000409161 HTATSF1O43719 755 aaKnown RBP15.49■□□□□ 0.07
SHANK2-203ENST00000409161 HAP1P54257 671 aaPredicted RBP15.48■□□□□ 0.07
SHANK2-203ENST00000409161 PABPN1Q86U42 306 aaKnown RBP eCLIP15.48■□□□□ 0.07
SHANK2-203ENST00000409161 DEKP35659 375 aaKnown RBP15.48■□□□□ 0.07
SHANK2-203ENST00000409161 NOC3LQ8WTT2 800 aaKnown RBP15.47■□□□□ 0.07
SHANK2-203ENST00000409161 CCDC34Q96HJ3 373 aa15.45■□□□□ 0.06
SHANK2-203ENST00000409161 OS9Q13438 667 aaPredicted RBP15.44■□□□□ 0.06
SHANK2-203ENST00000409161 CHIC2Q9UKJ5 165 aa15.44■□□□□ 0.06
SHANK2-203ENST00000409161 TPM4P67936 248 aa15.44■□□□□ 0.06
SHANK2-203ENST00000409161 RGS3P49796 1198 aa15.43■□□□□ 0.06
SHANK2-203ENST00000409161 PPP1R15AO75807 674 aaPredicted RBP15.42■□□□□ 0.06
SHANK2-203ENST00000409161 PHF14O94880 888 aa15.42■□□□□ 0.06
SHANK2-203ENST00000409161 SETQ01105 290 aaPredicted RBP15.42■□□□□ 0.06
SHANK2-203ENST00000409161 GOLGA2Q08379 1002 aa15.41■□□□□ 0.06
SHANK2-203ENST00000409161 CSPP1Q1MSJ5 1256 aa15.41■□□□□ 0.06
SHANK2-203ENST00000409161 TPRNQ4KMQ1 711 aa15.4■□□□□ 0.06
SHANK2-203ENST00000409161 GNL2Q13823 731 aaKnown RBP15.4■□□□□ 0.06
SHANK2-203ENST00000409161 A0A0G2JS52 829 aa15.39■□□□□ 0.05
SHANK2-203ENST00000409161 C14orf37Q86TY3 774 aa15.38■□□□□ 0.05
SHANK2-203ENST00000409161 ZCCHC6Q5VYS8 1495 aaKnown RBP15.38■□□□□ 0.05
SHANK2-203ENST00000409161 TULP1O00294 542 aaPredicted RBP15.36■□□□□ 0.05
SHANK2-203ENST00000409161 KIAA1211Q6ZU35 1233 aa15.36■□□□□ 0.05
SHANK2-203ENST00000409161 NAP1L2Q9ULW6 460 aaPredicted RBP15.36■□□□□ 0.05
SHANK2-203ENST00000409161 RSPH6AQ9H0K4 717 aa15.35■□□□□ 0.05
SHANK2-203ENST00000409161 CEP162Q5TB80 1403 aa15.35■□□□□ 0.05
SHANK2-203ENST00000409161 CARD11Q9BXL7 1154 aa15.33■□□□□ 0.05
SHANK2-203ENST00000409161 FRAT1Q92837 279 aaPredicted RBP15.33■□□□□ 0.04
SHANK2-203ENST00000409161 CCER2I3L3R5 266 aa15.33■□□□□ 0.04
SHANK2-203ENST00000409161 IPO8O15397 1037 aaKnown RBP15.32■□□□□ 0.04
SHANK2-203ENST00000409161 CEP164Q9UPV0 1460 aa15.32■□□□□ 0.04
SHANK2-203ENST00000409161 CHMP4AQ9BY43 222 aa15.32■□□□□ 0.04
SHANK2-203ENST00000409161 A0A0U1RQG5 324 aaPredicted RBP15.31■□□□□ 0.04
SHANK2-203ENST00000409161 GOLGA6L3A6NEY3 463 aa15.31■□□□□ 0.04
SHANK2-203ENST00000409161 CALD1Q05682 793 aaKnown RBP15.3■□□□□ 0.04
SHANK2-203ENST00000409161 TCERG1O14776 1098 aaKnown RBP15.29■□□□□ 0.04
SHANK2-203ENST00000409161 AMER1Q5JTC6 1135 aaPredicted RBP15.29■□□□□ 0.04
SHANK2-203ENST00000409161 NPHP1O15259 732 aa15.29■□□□□ 0.04
SHANK2-203ENST00000409161 TIMELESSQ9UNS1 1208 aa15.29■□□□□ 0.04
SHANK2-203ENST00000409161 CLSTN1O94985 981 aa15.29■□□□□ 0.04
SHANK2-203ENST00000409161 HSP90AA2PQ14568 343 aaPredicted RBP15.28■□□□□ 0.04
SHANK2-203ENST00000409161 ZBTB7CA1YPR0 619 aa15.27■□□□□ 0.04
SHANK2-203ENST00000409161 FHAD1B1AJZ9 1412 aa15.27■□□□□ 0.04
SHANK2-203ENST00000409161 CALRP27797 417 aaKnown RBP15.26■□□□□ 0.03
SHANK2-203ENST00000409161 HIRIP3Q9BW71 556 aaPredicted RBP15.26■□□□□ 0.03
SHANK2-203ENST00000409161 RBM19Q9Y4C8 960 aaKnown RBP15.26■□□□□ 0.03
SHANK2-203ENST00000409161 RRP7BPQ9NSQ0 103 aa15.26■□□□□ 0.03
SHANK2-203ENST00000409161 GPATCH3Q96I76 525 aa15.26■□□□□ 0.03
SHANK2-203ENST00000409161 GPS2Q13227 327 aa15.26■□□□□ 0.03
SHANK2-203ENST00000409161 B4GALNT3Q6L9W6 998 aa15.25■□□□□ 0.03
SHANK2-203ENST00000409161 DDX11L8A8MPP1 907 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 315 ms