RNA–Protein interactions for RNA: ENST00000409024.3

POLR1A-202, Transcript of RNA polymerase I subunit A, humanhuman

TSL 3

Gene POLR1A, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-202ENST00000409024 CUL7Q14999 1698 aa15.6■□□□□ 0.09
POLR1A-202ENST00000409024 GAPVD1Q14C86 1478 aa15.59■□□□□ 0.09
POLR1A-202ENST00000409024 SNAPC4Q5SXM2 1469 aa15.57■□□□□ 0.08
POLR1A-202ENST00000409024 CEP162Q5TB80 1403 aa15.56■□□□□ 0.08
POLR1A-202ENST00000409024 EHMT2Q96KQ7 1210 aa15.54■□□□□ 0.08
POLR1A-202ENST00000409024 MAGI1Q96QZ7 1491 aaPredicted RBP15.52■□□□□ 0.08
POLR1A-202ENST00000409024 GRIN2BQ13224 1484 aa15.51■□□□□ 0.07
POLR1A-202ENST00000409024 SYNJ2O15056 1496 aa15.48■□□□□ 0.07
POLR1A-202ENST00000409024 FHAD1B1AJZ9 1412 aa15.47■□□□□ 0.07
POLR1A-202ENST00000409024 CLIP1P30622 1438 aa15.47■□□□□ 0.07
POLR1A-202ENST00000409024 PBRM1Q86U86 1689 aa15.46■□□□□ 0.07
POLR1A-202ENST00000409024 ADAMTS12P58397 1594 aa15.41■□□□□ 0.06
POLR1A-202ENST00000409024 KDM4FA0A1W2PPD8 638 aa15.4■□□□□ 0.06
POLR1A-202ENST00000409024 VPS8Q8N3P4 1428 aa15.36■□□□□ 0.05
POLR1A-202ENST00000409024 CTTNBP2Q8WZ74 1663 aa15.35■□□□□ 0.05
POLR1A-202ENST00000409024 EFCAB5A4FU69 1503 aa15.33■□□□□ 0.05
POLR1A-202ENST00000409024 ERCC6L2Q5T890 1561 aa15.33■□□□□ 0.05
POLR1A-202ENST00000409024 FAM69CQ0P6D2 419 aa15.33■□□□□ 0.04
POLR1A-202ENST00000409024 KIF13AQ9H1H9 1805 aa15.32■□□□□ 0.04
POLR1A-202ENST00000409024 ARHGAP35Q9NRY4 1499 aa15.32■□□□□ 0.04
POLR1A-202ENST00000409024 GRIN2AQ12879 1464 aa15.28■□□□□ 0.04
POLR1A-202ENST00000409024 CEP170Q5SW79 1584 aa15.28■□□□□ 0.04
POLR1A-202ENST00000409024 NPM1P06748 294 aaKnown RBP eCLIP15.26■□□□□ 0.03
POLR1A-202ENST00000409024 TRIM26Q12899 539 aaPredicted RBP15.26■□□□□ 0.03
POLR1A-202ENST00000409024 KIAA0586Q9BVV6 1533 aa15.26■□□□□ 0.03
POLR1A-202ENST00000409024 ABCC10Q5T3U5 1492 aa15.25■□□□□ 0.03
POLR1A-202ENST00000409024 IQGAP2Q13576 1575 aa15.24■□□□□ 0.03
POLR1A-202ENST00000409024 APLP2Q06481 763 aa15.23■□□□□ 0.03
POLR1A-202ENST00000409024 NUP160Q12769 1436 aa15.23■□□□□ 0.03
POLR1A-202ENST00000409024 SAMD9Q5K651 1589 aa15.22■□□□□ 0.03
POLR1A-202ENST00000409024 RANGAP1P46060 587 aaPredicted RBP15.21■□□□□ 0.03
POLR1A-202ENST00000409024 UGGT2Q9NYU1 1516 aa15.21■□□□□ 0.03
POLR1A-202ENST00000409024 FMN1Q68DA7 1419 aa15.2■□□□□ 0.02
POLR1A-202ENST00000409024 MAP3K1Q13233 1512 aa15.2■□□□□ 0.02
POLR1A-202ENST00000409024 KDM6BO15054 1643 aa15.19■□□□□ 0.02
POLR1A-202ENST00000409024 SHROOM2Q13796 1616 aa15.18■□□□□ 0.02
POLR1A-202ENST00000409024 PRG4Q92954 1404 aaPredicted RBP15.17■□□□□ 0.02
POLR1A-202ENST00000409024 JPH4Q96JJ6 628 aa15.16■□□□□ 0.02
POLR1A-202ENST00000409024 MAPKBP1O60336 1514 aa15.14■□□□□ 0.01
POLR1A-202ENST00000409024 CASKIN1Q8WXD9 1431 aa15.14■□□□□ 0.01
POLR1A-202ENST00000409024 FYCO1Q9BQS8 1478 aa15.13■□□□□ 0.01
POLR1A-202ENST00000409024 DIP2BQ9P265 1576 aa15.12■□□□□ 0.01
POLR1A-202ENST00000409024 FHOD3Q2V2M9 1422 aa15.12■□□□□ 0.01
POLR1A-202ENST00000409024 PCGF6Q9BYE7 350 aa15.1■□□□□ 0.01
POLR1A-202ENST00000409024 CARMIL2Q6F5E8 1435 aa15.09■□□□□ 0.01
POLR1A-202ENST00000409024 P3H3Q8IVL6 736 aa15.08■□□□□ 0
POLR1A-202ENST00000409024 FBXO41Q8TF61 875 aa15.07■□□□□ 0
POLR1A-202ENST00000409024 ADGRL1O94910 1474 aa15.07■□□□□ 0
POLR1A-202ENST00000409024 DISP1Q96F81 1524 aa15.07■□□□□ 0
POLR1A-202ENST00000409024 KIAA0556O60303 1618 aa15.06■□□□□ 0
POLR1A-202ENST00000409024 TSPOAP1O95153 1857 aa15.06■□□□□ 0
POLR1A-202ENST00000409024 PCF11O94913 1555 aaKnown RBP15.05■□□□□ -0
POLR1A-202ENST00000409024 TIAM1Q13009 1591 aa15.05■□□□□ -0
POLR1A-202ENST00000409024 HECW2Q9P2P5 1572 aa15.04■□□□□ -0
POLR1A-202ENST00000409024 CFAP43Q8NDM7 1665 aa15.02□□□□□ -0.01
POLR1A-202ENST00000409024 CCDC18Q5T9S5 1454 aa15.01□□□□□ -0.01
POLR1A-202ENST00000409024 ADCY10Q96PN6 1610 aa15□□□□□ -0.01
POLR1A-202ENST00000409024 PPARGC1BQ86YN6 1023 aaKnown RBP15□□□□□ -0.01
POLR1A-202ENST00000409024 LRRC9Q6ZRR7 1453 aa15□□□□□ -0.01
POLR1A-202ENST00000409024 HECW1Q76N89 1606 aa14.99□□□□□ -0.01
POLR1A-202ENST00000409024 KANK4Q5T7N3 995 aaPredicted RBP14.97□□□□□ -0.01
POLR1A-202ENST00000409024 ATP1B4Q9UN42 357 aaPredicted RBP14.94□□□□□ -0.02
POLR1A-202ENST00000409024 EPRSP07814 1512 aaKnown RBP14.92□□□□□ -0.02
POLR1A-202ENST00000409024 RAPGEF6Q8TEU7 1601 aa14.92□□□□□ -0.02
POLR1A-202ENST00000409024 RRBP1Q9P2E9 1410 aaKnown RBP14.92□□□□□ -0.02
POLR1A-202ENST00000409024 MTUS2Q5JR59 1369 aa14.9□□□□□ -0.02
POLR1A-202ENST00000409024 EHBP1L1Q8N3D4 1523 aa14.9□□□□□ -0.02
POLR1A-202ENST00000409024 CDK11AQ9UQ88 783 aaPredicted RBP14.89□□□□□ -0.03
POLR1A-202ENST00000409024 PTPRGP23470 1445 aa14.89□□□□□ -0.03
POLR1A-202ENST00000409024 ABCA8O94911 1581 aa14.88□□□□□ -0.03
POLR1A-202ENST00000409024 PLB1Q6P1J6 1458 aa14.88□□□□□ -0.03
POLR1A-202ENST00000409024 NUP153P49790 1475 aaKnown RBP14.87□□□□□ -0.03
POLR1A-202ENST00000409024 COL17A1Q9UMD9 1497 aaPredicted RBP14.87□□□□□ -0.03
POLR1A-202ENST00000409024 TTBK1Q5TCY1 1321 aaPredicted RBP14.87□□□□□ -0.03
POLR1A-202ENST00000409024 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.86□□□□□ -0.03
POLR1A-202ENST00000409024 LRRIQ1Q96JM4 1722 aa14.86□□□□□ -0.03
POLR1A-202ENST00000409024 GLI2P10070 1586 aa14.86□□□□□ -0.03
POLR1A-202ENST00000409024 ASXL2Q76L83 1435 aa14.85□□□□□ -0.03
POLR1A-202ENST00000409024 CCNB3Q8WWL7 1395 aa14.85□□□□□ -0.03
POLR1A-202ENST00000409024 PPRC1Q5VV67 1664 aaKnown RBP14.84□□□□□ -0.03
POLR1A-202ENST00000409024 SUPT6HQ7KZ85 1726 aaKnown RBP14.83□□□□□ -0.03
POLR1A-202ENST00000409024 ABCC2Q92887 1545 aa14.83□□□□□ -0.04
POLR1A-202ENST00000409024 LMTK3Q96Q04 1460 aa14.82□□□□□ -0.04
POLR1A-202ENST00000409024 UACAQ9BZF9 1416 aa14.82□□□□□ -0.04
POLR1A-202ENST00000409024 TEX14Q8IWB6 1497 aa14.81□□□□□ -0.04
POLR1A-202ENST00000409024 PHLDB1Q86UU1 1377 aa14.8□□□□□ -0.04
POLR1A-202ENST00000409024 UHRF1BP1LA0JNW5 1464 aa14.79□□□□□ -0.04
POLR1A-202ENST00000409024 CDK13Q14004 1512 aaKnown RBP14.79□□□□□ -0.04
POLR1A-202ENST00000409024 NCOA2Q15596 1464 aa14.79□□□□□ -0.04
POLR1A-202ENST00000409024 TROQ12816 1431 aaPredicted RBP14.78□□□□□ -0.04
POLR1A-202ENST00000409024 MAGI3Q5TCQ9 1506 aa14.77□□□□□ -0.04
POLR1A-202ENST00000409024 MYOM3Q5VTT5 1437 aa14.77□□□□□ -0.04
POLR1A-202ENST00000409024 ATP10BO94823 1461 aa14.76□□□□□ -0.05
POLR1A-202ENST00000409024 MIA2Q96PC5 1412 aa14.76□□□□□ -0.05
POLR1A-202ENST00000409024 FGD6Q6ZV73 1430 aa14.75□□□□□ -0.05
POLR1A-202ENST00000409024 PLEKHD1A6NEE1 506 aa14.75□□□□□ -0.05
POLR1A-202ENST00000409024 ZEB1P37275 1124 aaPredicted RBP14.74□□□□□ -0.05
POLR1A-202ENST00000409024 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.73□□□□□ -0.05
POLR1A-202ENST00000409024 SOCS7O14512 581 aa14.73□□□□□ -0.05
POLR1A-202ENST00000409024 HRCP23327 699 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms