RNA–Protein interactions for RNA: ENST00000407298.7

APOBEC3B-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-204ENST00000407298 NPM1P06748 294 aaKnown RBP eCLIP21.86■■□□□ 1.09
APOBEC3B-204ENST00000407298 FAM69CQ0P6D2 419 aa21.78■■□□□ 1.08
APOBEC3B-204ENST00000407298 KIF13AQ9H1H9 1805 aa21.78■■□□□ 1.08
APOBEC3B-204ENST00000407298 ABCC10Q5T3U5 1492 aa21.74■■□□□ 1.07
APOBEC3B-204ENST00000407298 RUSC2Q8N2Y8 1516 aa21.72■■□□□ 1.07
APOBEC3B-204ENST00000407298 MAPKBP1O60336 1514 aa21.7■■□□□ 1.06
APOBEC3B-204ENST00000407298 KIAA0586Q9BVV6 1533 aa21.67■■□□□ 1.06
APOBEC3B-204ENST00000407298 KIF27Q86VH2 1401 aa21.63■■□□□ 1.05
APOBEC3B-204ENST00000407298 IGF1RP08069 1367 aa21.63■■□□□ 1.05
APOBEC3B-204ENST00000407298 ADCY10Q96PN6 1610 aa21.62■■□□□ 1.05
APOBEC3B-204ENST00000407298 DIP2BQ9P265 1576 aa21.61■■□□□ 1.05
APOBEC3B-204ENST00000407298 CUL7Q14999 1698 aa21.58■■□□□ 1.05
APOBEC3B-204ENST00000407298 PTPRGP23470 1445 aa21.55■■□□□ 1.04
APOBEC3B-204ENST00000407298 KDM6BO15054 1643 aa21.54■■□□□ 1.04
APOBEC3B-204ENST00000407298 CARMIL2Q6F5E8 1435 aa21.52■■□□□ 1.04
APOBEC3B-204ENST00000407298 CARMIL1Q5VZK9 1371 aa21.5■■□□□ 1.03
APOBEC3B-204ENST00000407298 TNIKQ9UKE5 1360 aa21.48■■□□□ 1.03
APOBEC3B-204ENST00000407298 TTBK1Q5TCY1 1321 aaPredicted RBP21.47■■□□□ 1.03
APOBEC3B-204ENST00000407298 TSPOAP1O95153 1857 aa21.46■■□□□ 1.03
APOBEC3B-204ENST00000407298 KDM4FA0A1W2PPD8 638 aa21.46■■□□□ 1.03
APOBEC3B-204ENST00000407298 ABCC2Q92887 1545 aa21.44■■□□□ 1.02
APOBEC3B-204ENST00000407298 PLB1Q6P1J6 1458 aa21.43■■□□□ 1.02
APOBEC3B-204ENST00000407298 ASXL2Q76L83 1435 aa21.39■■□□□ 1.02
APOBEC3B-204ENST00000407298 IQGAP2Q13576 1575 aa21.38■■□□□ 1.01
APOBEC3B-204ENST00000407298 UHRF1BP1LA0JNW5 1464 aa21.38■■□□□ 1.01
APOBEC3B-204ENST00000407298 GLI2P10070 1586 aa21.36■■□□□ 1.01
APOBEC3B-204ENST00000407298 UACAQ9BZF9 1416 aa21.36■■□□□ 1.01
APOBEC3B-204ENST00000407298 DISP1Q96F81 1524 aa21.28■■□□□ 1
APOBEC3B-204ENST00000407298 TEX14Q8IWB6 1497 aa21.26■□□□□ 0.99
APOBEC3B-204ENST00000407298 KDM5BQ9UGL1 1544 aa21.26■□□□□ 0.99
APOBEC3B-204ENST00000407298 RAPGEF2Q9Y4G8 1499 aa21.26■□□□□ 0.99
APOBEC3B-204ENST00000407298 EPRSP07814 1512 aaKnown RBP21.25■□□□□ 0.99
APOBEC3B-204ENST00000407298 PPRC1Q5VV67 1664 aaKnown RBP21.25■□□□□ 0.99
APOBEC3B-204ENST00000407298 UGGT2Q9NYU1 1516 aa21.24■□□□□ 0.99
APOBEC3B-204ENST00000407298 ADGRL1O94910 1474 aa21.2■□□□□ 0.98
APOBEC3B-204ENST00000407298 MAP3K4Q9Y6R4 1608 aa21.19■□□□□ 0.98
APOBEC3B-204ENST00000407298 COL17A1Q9UMD9 1497 aaPredicted RBP21.17■□□□□ 0.98
APOBEC3B-204ENST00000407298 ZCCHC11Q5TAX3 1644 aaKnown RBP21.17■□□□□ 0.98
APOBEC3B-204ENST00000407298 KIAA0556O60303 1618 aa21.16■□□□□ 0.98
APOBEC3B-204ENST00000407298 WDR7Q9Y4E6 1490 aa21.13■□□□□ 0.97
APOBEC3B-204ENST00000407298 ILDR1Q86SU0 546 aaPredicted RBP21.13■□□□□ 0.97
APOBEC3B-204ENST00000407298 FAM9AQ8IZU1 332 aaPredicted RBP21.12■□□□□ 0.97
APOBEC3B-204ENST00000407298 GOLGA3Q08378 1498 aa21.12■□□□□ 0.97
APOBEC3B-204ENST00000407298 CD109Q6YHK3 1445 aa21.08■□□□□ 0.97
APOBEC3B-204ENST00000407298 KCNH8Q96L42 1107 aa21.07■□□□□ 0.96
APOBEC3B-204ENST00000407298 MAGI3Q5TCQ9 1506 aa21.05■□□□□ 0.96
APOBEC3B-204ENST00000407298 CFAP43Q8NDM7 1665 aa21.02■□□□□ 0.95
APOBEC3B-204ENST00000407298 CTTNBP2Q8WZ74 1663 aa21.02■□□□□ 0.95
APOBEC3B-204ENST00000407298 ABCA8O94911 1581 aa21■□□□□ 0.95
APOBEC3B-204ENST00000407298 HECW2Q9P2P5 1572 aa20.99■□□□□ 0.95
APOBEC3B-204ENST00000407298 SENP3Q9H4L4 574 aaPredicted RBP20.95■□□□□ 0.94
APOBEC3B-204ENST00000407298 PRXQ9BXM0 1461 aa20.94■□□□□ 0.94
APOBEC3B-204ENST00000407298 PHLDB1Q86UU1 1377 aa20.92■□□□□ 0.94
APOBEC3B-204ENST00000407298 ARAP3Q8WWN8 1544 aa20.9■□□□□ 0.94
APOBEC3B-204ENST00000407298 ATP10BO94823 1461 aa20.86■□□□□ 0.93
APOBEC3B-204ENST00000407298 P3H3Q8IVL6 736 aa20.85■□□□□ 0.93
APOBEC3B-204ENST00000407298 ARID3CA6NKF2 412 aa20.84■□□□□ 0.93
APOBEC3B-204ENST00000407298 KIF21BO75037 1637 aa20.82■□□□□ 0.92
APOBEC3B-204ENST00000407298 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.8■□□□□ 0.92
APOBEC3B-204ENST00000407298 HNRNPUL2Q1KMD3 747 aaKnown RBP20.8■□□□□ 0.92
APOBEC3B-204ENST00000407298 ABCA9Q8IUA7 1624 aa20.78■□□□□ 0.92
APOBEC3B-204ENST00000407298 NEO1Q92859 1461 aa20.78■□□□□ 0.92
APOBEC3B-204ENST00000407298 RAPGEF3O95398 923 aa20.77■□□□□ 0.92
APOBEC3B-204ENST00000407298 CSRNP3Q8WYN3 585 aa20.77■□□□□ 0.92
APOBEC3B-204ENST00000407298 FBXO41Q8TF61 875 aa20.73■□□□□ 0.91
APOBEC3B-204ENST00000407298 PTPRMP28827 1452 aa20.73■□□□□ 0.91
APOBEC3B-204ENST00000407298 ARID4BQ4LE39 1312 aaPredicted RBP20.73■□□□□ 0.91
APOBEC3B-204ENST00000407298 RAPGEF6Q8TEU7 1601 aa20.72■□□□□ 0.91
APOBEC3B-204ENST00000407298 SAMD9Q5K651 1589 aa20.72■□□□□ 0.91
APOBEC3B-204ENST00000407298 PHF23Q9BUL5 403 aaPredicted RBP20.71■□□□□ 0.91
APOBEC3B-204ENST00000407298 ADAMTSL3P82987 1691 aa20.7■□□□□ 0.91
APOBEC3B-204ENST00000407298 PLEKHD1A6NEE1 506 aa20.69■□□□□ 0.9
APOBEC3B-204ENST00000407298 NUP153P49790 1475 aaKnown RBP20.64■□□□□ 0.89
APOBEC3B-204ENST00000407298 BCORL1Q5H9F3 1711 aa20.64■□□□□ 0.89
APOBEC3B-204ENST00000407298 DENND4BO75064 1496 aaPredicted RBP20.63■□□□□ 0.89
APOBEC3B-204ENST00000407298 EEA1Q15075 1411 aa20.63■□□□□ 0.89
APOBEC3B-204ENST00000407298 RANGAP1P46060 587 aaPredicted RBP20.62■□□□□ 0.89
APOBEC3B-204ENST00000407298 FRMPD1Q5SYB0 1578 aa20.6■□□□□ 0.89
APOBEC3B-204ENST00000407298 AKNAQ7Z591 1439 aa20.6■□□□□ 0.89
APOBEC3B-204ENST00000407298 FHOD3Q2V2M9 1422 aa20.59■□□□□ 0.89
APOBEC3B-204ENST00000407298 POGZQ7Z3K3 1410 aa20.59■□□□□ 0.89
APOBEC3B-204ENST00000407298 MADDQ8WXG6 1647 aa20.58■□□□□ 0.89
APOBEC3B-204ENST00000407298 PCF11O94913 1555 aaKnown RBP20.58■□□□□ 0.88
APOBEC3B-204ENST00000407298 CFAP74Q9C0B2 1584 aa20.58■□□□□ 0.88
APOBEC3B-204ENST00000407298 FANCAO15360 1455 aa20.57■□□□□ 0.88
APOBEC3B-204ENST00000407298 ARHGEF40Q8TER5 1519 aa20.56■□□□□ 0.88
APOBEC3B-204ENST00000407298 LMTK3Q96Q04 1460 aa20.54■□□□□ 0.88
APOBEC3B-204ENST00000407298 MAGI2Q86UL8 1455 aa20.52■□□□□ 0.88
APOBEC3B-204ENST00000407298 RICTORQ6R327 1708 aa20.52■□□□□ 0.88
APOBEC3B-204ENST00000407298 EFCAB5A4FU69 1503 aa20.51■□□□□ 0.87
APOBEC3B-204ENST00000407298 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.51■□□□□ 0.87
APOBEC3B-204ENST00000407298 RIMS1Q86UR5 1692 aaKnown RBP20.5■□□□□ 0.87
APOBEC3B-204ENST00000407298 ZMYM4Q5VZL5 1548 aa20.48■□□□□ 0.87
APOBEC3B-204ENST00000407298 ZFYVE16Q7Z3T8 1539 aa20.48■□□□□ 0.87
APOBEC3B-204ENST00000407298 PLPPR3Q6T4P5 718 aa20.46■□□□□ 0.87
APOBEC3B-204ENST00000407298 CDK11AQ9UQ88 783 aaPredicted RBP20.45■□□□□ 0.86
APOBEC3B-204ENST00000407298 PLCH2O75038 1416 aa20.44■□□□□ 0.86
APOBEC3B-204ENST00000407298 TTC37Q6PGP7 1564 aa20.44■□□□□ 0.86
APOBEC3B-204ENST00000407298 HSPA2P54652 639 aa20.44■□□□□ 0.86
APOBEC3B-204ENST00000407298 SCAPERQ9BY12 1400 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 178.9 ms