RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 KDM4FA0A1W2PPD8 638 aa21.26■□□□□ 0.99
SMARCB1-203ENST00000407082 ILDR1Q86SU0 546 aaPredicted RBP21.25■□□□□ 0.99
SMARCB1-203ENST00000407082 ABCC10Q5T3U5 1492 aa21.24■□□□□ 0.99
SMARCB1-203ENST00000407082 ERICH3Q5RHP9 1530 aa21.17■□□□□ 0.98
SMARCB1-203ENST00000407082 KDM6BO15054 1643 aa21.15■□□□□ 0.98
SMARCB1-203ENST00000407082 TOP2BQ02880 1626 aa21.13■□□□□ 0.97
SMARCB1-203ENST00000407082 DIP2BQ9P265 1576 aa21.13■□□□□ 0.97
SMARCB1-203ENST00000407082 TSPOAP1O95153 1857 aa21.13■□□□□ 0.97
SMARCB1-203ENST00000407082 TTBK1Q5TCY1 1321 aaPredicted RBP21.12■□□□□ 0.97
SMARCB1-203ENST00000407082 MAPKBP1O60336 1514 aa21.11■□□□□ 0.97
SMARCB1-203ENST00000407082 BIVM-ERCC5R4GMW8 1640 aa21.11■□□□□ 0.97
SMARCB1-203ENST00000407082 ADCY10Q96PN6 1610 aa21.08■□□□□ 0.97
SMARCB1-203ENST00000407082 RUSC2Q8N2Y8 1516 aa21.04■□□□□ 0.96
SMARCB1-203ENST00000407082 PTPRGP23470 1445 aa20.95■□□□□ 0.94
SMARCB1-203ENST00000407082 KIAA0586Q9BVV6 1533 aa20.94■□□□□ 0.94
SMARCB1-203ENST00000407082 ADGRL1O94910 1474 aa20.91■□□□□ 0.94
SMARCB1-203ENST00000407082 ASXL2Q76L83 1435 aa20.87■□□□□ 0.93
SMARCB1-203ENST00000407082 IGF1RP08069 1367 aa20.86■□□□□ 0.93
SMARCB1-203ENST00000407082 PLB1Q6P1J6 1458 aa20.82■□□□□ 0.92
SMARCB1-203ENST00000407082 CARMIL2Q6F5E8 1435 aa20.82■□□□□ 0.92
SMARCB1-203ENST00000407082 ABCC2Q92887 1545 aa20.82■□□□□ 0.92
SMARCB1-203ENST00000407082 TNIKQ9UKE5 1360 aa20.82■□□□□ 0.92
SMARCB1-203ENST00000407082 KIF27Q86VH2 1401 aa20.79■□□□□ 0.92
SMARCB1-203ENST00000407082 HECW2Q9P2P5 1572 aa20.79■□□□□ 0.92
SMARCB1-203ENST00000407082 PPRC1Q5VV67 1664 aaKnown RBP20.77■□□□□ 0.92
SMARCB1-203ENST00000407082 COL17A1Q9UMD9 1497 aaPredicted RBP20.77■□□□□ 0.92
SMARCB1-203ENST00000407082 GLI2P10070 1586 aa20.76■□□□□ 0.91
SMARCB1-203ENST00000407082 CUL7Q14999 1698 aa20.75■□□□□ 0.91
SMARCB1-203ENST00000407082 CARMIL1Q5VZK9 1371 aa20.73■□□□□ 0.91
SMARCB1-203ENST00000407082 UACAQ9BZF9 1416 aa20.72■□□□□ 0.91
SMARCB1-203ENST00000407082 EPRSP07814 1512 aaKnown RBP20.69■□□□□ 0.9
SMARCB1-203ENST00000407082 TEX14Q8IWB6 1497 aa20.69■□□□□ 0.9
SMARCB1-203ENST00000407082 UHRF1BP1LA0JNW5 1464 aa20.68■□□□□ 0.9
SMARCB1-203ENST00000407082 IQGAP2Q13576 1575 aa20.64■□□□□ 0.9
SMARCB1-203ENST00000407082 MAP3K4Q9Y6R4 1608 aa20.63■□□□□ 0.89
SMARCB1-203ENST00000407082 KCNH8Q96L42 1107 aa20.62■□□□□ 0.89
SMARCB1-203ENST00000407082 KDM5BQ9UGL1 1544 aa20.6■□□□□ 0.89
SMARCB1-203ENST00000407082 FBXO41Q8TF61 875 aa20.6■□□□□ 0.89
SMARCB1-203ENST00000407082 DISP1Q96F81 1524 aa20.59■□□□□ 0.89
SMARCB1-203ENST00000407082 FAM9AQ8IZU1 332 aaPredicted RBP20.59■□□□□ 0.89
SMARCB1-203ENST00000407082 ZCCHC11Q5TAX3 1644 aaKnown RBP20.58■□□□□ 0.89
SMARCB1-203ENST00000407082 EEA1Q15075 1411 aa20.56■□□□□ 0.88
SMARCB1-203ENST00000407082 CSRNP3Q8WYN3 585 aa20.56■□□□□ 0.88
SMARCB1-203ENST00000407082 CD109Q6YHK3 1445 aa20.53■□□□□ 0.88
SMARCB1-203ENST00000407082 WDR7Q9Y4E6 1490 aa20.52■□□□□ 0.88
SMARCB1-203ENST00000407082 LOC105371045A0A1W2PR82 267 aa20.52■□□□□ 0.88
SMARCB1-203ENST00000407082 UGGT2Q9NYU1 1516 aa20.47■□□□□ 0.87
SMARCB1-203ENST00000407082 KIAA0556O60303 1618 aa20.45■□□□□ 0.86
SMARCB1-203ENST00000407082 RAPGEF2Q9Y4G8 1499 aa20.44■□□□□ 0.86
SMARCB1-203ENST00000407082 KIF21BO75037 1637 aa20.44■□□□□ 0.86
SMARCB1-203ENST00000407082 MAGI3Q5TCQ9 1506 aa20.43■□□□□ 0.86
SMARCB1-203ENST00000407082 ARID3CA6NKF2 412 aa20.43■□□□□ 0.86
SMARCB1-203ENST00000407082 PRXQ9BXM0 1461 aa20.43■□□□□ 0.86
SMARCB1-203ENST00000407082 CFAP43Q8NDM7 1665 aa20.39■□□□□ 0.86
SMARCB1-203ENST00000407082 ARID4BQ4LE39 1312 aaPredicted RBP20.37■□□□□ 0.85
SMARCB1-203ENST00000407082 PTPRMP28827 1452 aa20.35■□□□□ 0.85
SMARCB1-203ENST00000407082 RAPGEF3O95398 923 aa20.33■□□□□ 0.85
SMARCB1-203ENST00000407082 EHMT2Q96KQ7 1210 aa20.33■□□□□ 0.85
SMARCB1-203ENST00000407082 PLPPR3Q6T4P5 718 aa20.32■□□□□ 0.84
SMARCB1-203ENST00000407082 GOLGA3Q08378 1498 aa20.31■□□□□ 0.84
SMARCB1-203ENST00000407082 P3H3Q8IVL6 736 aa20.3■□□□□ 0.84
SMARCB1-203ENST00000407082 ABCA8O94911 1581 aa20.29■□□□□ 0.84
SMARCB1-203ENST00000407082 ARAP3Q8WWN8 1544 aa20.29■□□□□ 0.84
SMARCB1-203ENST00000407082 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.26■□□□□ 0.83
SMARCB1-203ENST00000407082 HNRNPUL2Q1KMD3 747 aaKnown RBP20.26■□□□□ 0.83
SMARCB1-203ENST00000407082 TRIM26Q12899 539 aaPredicted RBP20.25■□□□□ 0.83
SMARCB1-203ENST00000407082 ADAMTSL3P82987 1691 aa20.25■□□□□ 0.83
SMARCB1-203ENST00000407082 UBTFP17480 764 aaKnown RBP20.24■□□□□ 0.83
SMARCB1-203ENST00000407082 PCGF6Q9BYE7 350 aa20.24■□□□□ 0.83
SMARCB1-203ENST00000407082 CTTNBP2Q8WZ74 1663 aa20.23■□□□□ 0.83
SMARCB1-203ENST00000407082 HSPA2P54652 639 aa20.23■□□□□ 0.83
SMARCB1-203ENST00000407082 LMTK3Q96Q04 1460 aa20.22■□□□□ 0.83
SMARCB1-203ENST00000407082 PHLDB1Q86UU1 1377 aa20.21■□□□□ 0.83
SMARCB1-203ENST00000407082 PCF11O94913 1555 aaKnown RBP20.21■□□□□ 0.83
SMARCB1-203ENST00000407082 ATP10BO94823 1461 aa20.2■□□□□ 0.82
SMARCB1-203ENST00000407082 MADDQ8WXG6 1647 aa20.18■□□□□ 0.82
SMARCB1-203ENST00000407082 HRCP23327 699 aa20.17■□□□□ 0.82
SMARCB1-203ENST00000407082 BCORL1Q5H9F3 1711 aa20.16■□□□□ 0.82
SMARCB1-203ENST00000407082 CERKQ8TCT0 537 aa20.15■□□□□ 0.82
SMARCB1-203ENST00000407082 ABCA9Q8IUA7 1624 aa20.13■□□□□ 0.81
SMARCB1-203ENST00000407082 NEO1Q92859 1461 aa20.12■□□□□ 0.81
SMARCB1-203ENST00000407082 RANGAP1P46060 587 aaPredicted RBP20.12■□□□□ 0.81
SMARCB1-203ENST00000407082 RIMS1Q86UR5 1692 aaKnown RBP20.12■□□□□ 0.81
SMARCB1-203ENST00000407082 MLECQ14165 292 aa20.11■□□□□ 0.81
SMARCB1-203ENST00000407082 DISP3Q9P2K9 1392 aa20.08■□□□□ 0.81
SMARCB1-203ENST00000407082 FRMPD1Q5SYB0 1578 aa20.06■□□□□ 0.8
SMARCB1-203ENST00000407082 ILDR2Q71H61 639 aa20.05■□□□□ 0.8
SMARCB1-203ENST00000407082 DENND4BO75064 1496 aaPredicted RBP20.05■□□□□ 0.8
SMARCB1-203ENST00000407082 POGZQ7Z3K3 1410 aa20.03■□□□□ 0.8
SMARCB1-203ENST00000407082 PLEKHD1A6NEE1 506 aa20.02■□□□□ 0.8
SMARCB1-203ENST00000407082 AKNAQ7Z591 1439 aa20.01■□□□□ 0.79
SMARCB1-203ENST00000407082 SOCS7O14512 581 aa20■□□□□ 0.79
SMARCB1-203ENST00000407082 RAPGEF6Q8TEU7 1601 aa20■□□□□ 0.79
SMARCB1-203ENST00000407082 ARHGEF40Q8TER5 1519 aa20■□□□□ 0.79
SMARCB1-203ENST00000407082 FANCAO15360 1455 aa19.99■□□□□ 0.79
SMARCB1-203ENST00000407082 FHOD3Q2V2M9 1422 aa19.94■□□□□ 0.78
SMARCB1-203ENST00000407082 YEATS2Q9ULM3 1422 aa19.94■□□□□ 0.78
SMARCB1-203ENST00000407082 SAMD9Q5K651 1589 aa19.94■□□□□ 0.78
SMARCB1-203ENST00000407082 RICTORQ6R327 1708 aa19.93■□□□□ 0.78
SMARCB1-203ENST00000407082 CEBPAP49715 358 aaPredicted RBP19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms