RNA–Protein interactions for RNA: ENST00000407004.7

ILF3-202, Transcript of interleukin enhancer binding factor 3, humanhuman

TSL 1 (best) BASIC

Gene ILF3, Length 3,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ILF3-202ENST00000407004 AQRO60306 1485 aaKnown RBP eCLIP18.78■□□□□ 0.64e-9■■■■□ 23.4
ILF3-202ENST00000407004 NUP160Q12769 1436 aa18.77■□□□□ 0.6
ILF3-202ENST00000407004 CHD1O14646 1710 aa18.76■□□□□ 0.59
ILF3-202ENST00000407004 GRIN2AQ12879 1464 aa18.76■□□□□ 0.59
ILF3-202ENST00000407004 SHROOM2Q13796 1616 aa18.76■□□□□ 0.59
ILF3-202ENST00000407004 CSRNP3Q8WYN3 585 aa18.76■□□□□ 0.59
ILF3-202ENST00000407004 TDRD9Q8NDG6 1382 aaKnown RBP18.74■□□□□ 0.59
ILF3-202ENST00000407004 CARMIL1Q5VZK9 1371 aa18.74■□□□□ 0.59
ILF3-202ENST00000407004 CLASP1Q7Z460 1538 aa18.73■□□□□ 0.59
ILF3-202ENST00000407004 CEP170Q5SW79 1584 aa18.67■□□□□ 0.58
ILF3-202ENST00000407004 TNIKQ9UKE5 1360 aa18.67■□□□□ 0.58
ILF3-202ENST00000407004 UGGT2Q9NYU1 1516 aa18.67■□□□□ 0.58
ILF3-202ENST00000407004 EFCAB5A4FU69 1503 aa18.67■□□□□ 0.58
ILF3-202ENST00000407004 SAMD9Q5K651 1589 aa18.67■□□□□ 0.58
ILF3-202ENST00000407004 KIAA0586Q9BVV6 1533 aa18.65■□□□□ 0.58
ILF3-202ENST00000407004 IQGAP2Q13576 1575 aa18.62■□□□□ 0.57
ILF3-202ENST00000407004 ACIN1Q9UKV3 1341 aaKnown RBP18.58■□□□□ 0.56
ILF3-202ENST00000407004 GTF3C3Q9Y5Q9 886 aa18.57■□□□□ 0.56
ILF3-202ENST00000407004 ZEB1P37275 1124 aaPredicted RBP18.55■□□□□ 0.56
ILF3-202ENST00000407004 TRIM26Q12899 539 aaPredicted RBP18.54■□□□□ 0.56
ILF3-202ENST00000407004 NEUROD1Q13562 356 aa18.54■□□□□ 0.56
ILF3-202ENST00000407004 KIAA0556O60303 1618 aa18.48■□□□□ 0.55
ILF3-202ENST00000407004 DISP1Q96F81 1524 aa18.42■□□□□ 0.54
ILF3-202ENST00000407004 LOC105371045A0A1W2PR82 267 aa18.41■□□□□ 0.54
ILF3-202ENST00000407004 CENPBP07199 599 aaPredicted RBP18.38■□□□□ 0.53
ILF3-202ENST00000407004 MAP3K1Q13233 1512 aa18.38■□□□□ 0.53
ILF3-202ENST00000407004 ARHGAP35Q9NRY4 1499 aa18.38■□□□□ 0.53
ILF3-202ENST00000407004 CEP162Q5TB80 1403 aa18.36■□□□□ 0.53
ILF3-202ENST00000407004 CHMP7Q8WUX9 453 aaPredicted RBP18.36■□□□□ 0.53
ILF3-202ENST00000407004 PLEKHG5O94827 1062 aa18.34■□□□□ 0.53
ILF3-202ENST00000407004 ARAP1Q96P48 1450 aa18.34■□□□□ 0.53
ILF3-202ENST00000407004 UHRF1BP1LA0JNW5 1464 aa18.32■□□□□ 0.52
ILF3-202ENST00000407004 DNAJC5Q9H3Z4 198 aa18.31■□□□□ 0.52
ILF3-202ENST00000407004 CARMIL2Q6F5E8 1435 aa18.31■□□□□ 0.52
ILF3-202ENST00000407004 ABCA8O94911 1581 aa18.3■□□□□ 0.52
ILF3-202ENST00000407004 CLIP1P30622 1438 aa18.3■□□□□ 0.52
ILF3-202ENST00000407004 FYCO1Q9BQS8 1478 aa18.28■□□□□ 0.52
ILF3-202ENST00000407004 CFAP43Q8NDM7 1665 aa18.27■□□□□ 0.52
ILF3-202ENST00000407004 EIF5BO60841 1220 aaKnown RBP18.27■□□□□ 0.52
ILF3-202ENST00000407004 FMN1Q68DA7 1419 aa18.27■□□□□ 0.52
ILF3-202ENST00000407004 HECW1Q76N89 1606 aa18.24■□□□□ 0.51
ILF3-202ENST00000407004 VPS8Q8N3P4 1428 aa18.24■□□□□ 0.51
ILF3-202ENST00000407004 RAPGEF6Q8TEU7 1601 aa18.23■□□□□ 0.51
ILF3-202ENST00000407004 OSCARQ8IYS5 282 aa18.23■□□□□ 0.51
ILF3-202ENST00000407004 CASKIN1Q8WXD9 1431 aa18.23■□□□□ 0.51
ILF3-202ENST00000407004 PRG4Q92954 1404 aaPredicted RBP18.2■□□□□ 0.5
ILF3-202ENST00000407004 CCDC18Q5T9S5 1454 aa18.19■□□□□ 0.5
ILF3-202ENST00000407004 JPH4Q96JJ6 628 aa18.18■□□□□ 0.5
ILF3-202ENST00000407004 LRRIQ1Q96JM4 1722 aa18.18■□□□□ 0.5
ILF3-202ENST00000407004 PCF11O94913 1555 aaKnown RBP18.17■□□□□ 0.5
ILF3-202ENST00000407004 RIMBP3CA6NJZ7 1639 aa18.17■□□□□ 0.5
ILF3-202ENST00000407004 RIMBP3BA6NNM3 1639 aa18.17■□□□□ 0.5
ILF3-202ENST00000407004 RIMBP3Q9UFD9 1639 aa18.17■□□□□ 0.5
ILF3-202ENST00000407004 ABCC2Q92887 1545 aa18.17■□□□□ 0.5
ILF3-202ENST00000407004 ARHGEF11O15085 1522 aa18.16■□□□□ 0.5
ILF3-202ENST00000407004 ADCY10Q96PN6 1610 aa18.15■□□□□ 0.5
ILF3-202ENST00000407004 ERCC6L2Q5T890 1561 aa18.14■□□□□ 0.49
ILF3-202ENST00000407004 UBTFP17480 764 aaKnown RBP18.13■□□□□ 0.49
ILF3-202ENST00000407004 KDM5BQ9UGL1 1544 aa18.1■□□□□ 0.49
ILF3-202ENST00000407004 TIAM1Q13009 1591 aa18.09■□□□□ 0.49
ILF3-202ENST00000407004 DAXXQ9UER7 740 aaPredicted RBP18.09■□□□□ 0.49
ILF3-202ENST00000407004 FHOD3Q2V2M9 1422 aa18.07■□□□□ 0.48
ILF3-202ENST00000407004 UACAQ9BZF9 1416 aa18.07■□□□□ 0.48
ILF3-202ENST00000407004 YTHDC1Q96MU7 727 aaKnown RBP18.07■□□□□ 0.48
ILF3-202ENST00000407004 DIEXFQ68CQ4 756 aaKnown RBP18.06■□□□□ 0.48
ILF3-202ENST00000407004 NUP153P49790 1475 aaKnown RBP18.06■□□□□ 0.48
ILF3-202ENST00000407004 MAPKBP1O60336 1514 aa18.04■□□□□ 0.48
ILF3-202ENST00000407004 PTPRGP23470 1445 aa18.03■□□□□ 0.48
ILF3-202ENST00000407004 ANO8Q9HCE9 1232 aaPredicted RBP18.03■□□□□ 0.48
ILF3-202ENST00000407004 ZCCHC11Q5TAX3 1644 aaKnown RBP18.02■□□□□ 0.48
ILF3-202ENST00000407004 EPRSP07814 1512 aaKnown RBP18.02■□□□□ 0.48
ILF3-202ENST00000407004 EHBP1L1Q8N3D4 1523 aa18.02■□□□□ 0.48
ILF3-202ENST00000407004 FBLN2P98095 1184 aa18.01■□□□□ 0.47
ILF3-202ENST00000407004 ARAP3Q8WWN8 1544 aa17.96■□□□□ 0.47
ILF3-202ENST00000407004 GLI2P10070 1586 aa17.96■□□□□ 0.47
ILF3-202ENST00000407004 PLB1Q6P1J6 1458 aa17.94■□□□□ 0.46
ILF3-202ENST00000407004 ATP10BO94823 1461 aa17.92■□□□□ 0.46
ILF3-202ENST00000407004 SUPT6HQ7KZ85 1726 aaKnown RBP17.92■□□□□ 0.46
ILF3-202ENST00000407004 LRRC9Q6ZRR7 1453 aa17.92■□□□□ 0.46
ILF3-202ENST00000407004 CCER1Q8TC90 406 aaPredicted RBP17.9■□□□□ 0.46
ILF3-202ENST00000407004 ABCA9Q8IUA7 1624 aa17.88■□□□□ 0.45
ILF3-202ENST00000407004 ITSN2Q9NZM3 1697 aa17.88■□□□□ 0.45
ILF3-202ENST00000407004 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.88■□□□□ 0.45
ILF3-202ENST00000407004 MAGI3Q5TCQ9 1506 aa17.87■□□□□ 0.45
ILF3-202ENST00000407004 KIF14Q15058 1648 aa17.86■□□□□ 0.45
ILF3-202ENST00000407004 TROQ12816 1431 aaPredicted RBP17.86■□□□□ 0.45
ILF3-202ENST00000407004 ABCC10Q5T3U5 1492 aa17.83■□□□□ 0.45
ILF3-202ENST00000407004 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.83■□□□□ 0.45
ILF3-202ENST00000407004 PREX2Q70Z35 1606 aa17.82■□□□□ 0.44
ILF3-202ENST00000407004 ANP32EQ9BTT0 268 aa17.82■□□□□ 0.44
ILF3-202ENST00000407004 WDR7Q9Y4E6 1490 aa17.81■□□□□ 0.44
ILF3-202ENST00000407004 CCDC136Q96JN2 1154 aa17.81■□□□□ 0.44
ILF3-202ENST00000407004 MAP3K4Q9Y6R4 1608 aa17.81■□□□□ 0.44
ILF3-202ENST00000407004 CDK13Q14004 1512 aaKnown RBP17.81■□□□□ 0.44
ILF3-202ENST00000407004 CFAP74Q9C0B2 1584 aa17.81■□□□□ 0.44
ILF3-202ENST00000407004 EHMT2Q96KQ7 1210 aa17.8■□□□□ 0.44
ILF3-202ENST00000407004 TCOF1Q13428 1488 aaKnown RBP17.78■□□□□ 0.44
ILF3-202ENST00000407004 MYO5CQ9NQX4 1742 aa17.78■□□□□ 0.44
ILF3-202ENST00000407004 CDC42BPAQ5VT25 1732 aa17.77■□□□□ 0.44
ILF3-202ENST00000407004 MIA2Q96PC5 1412 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms