RNA–Protein interactions for RNA: ENST00000405375.5

CDKN1A-203, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-203ENST00000405375 DHX57Q6P158 1386 aaKnown RBP24.15■■□□□ 1.46
CDKN1A-203ENST00000405375 ABCA5Q8WWZ7 1642 aa24.15■■□□□ 1.46
CDKN1A-203ENST00000405375 EFCAB5A4FU69 1503 aa24.15■■□□□ 1.46
CDKN1A-203ENST00000405375 LRRC9Q6ZRR7 1453 aa24.14■■□□□ 1.45
CDKN1A-203ENST00000405375 PCF11O94913 1555 aaKnown RBP24.13■■□□□ 1.45
CDKN1A-203ENST00000405375 CTTNBP2Q8WZ74 1663 aa24.12■■□□□ 1.45
CDKN1A-203ENST00000405375 CFAP43Q8NDM7 1665 aa24.11■■□□□ 1.45
CDKN1A-203ENST00000405375 KIF21AQ7Z4S6 1674 aa24.09■■□□□ 1.45
CDKN1A-203ENST00000405375 FHOD3Q2V2M9 1422 aa24.08■■□□□ 1.45
CDKN1A-203ENST00000405375 TDRD9Q8NDG6 1382 aaKnown RBP24.07■■□□□ 1.44
CDKN1A-203ENST00000405375 P3H3Q8IVL6 736 aa24.06■■□□□ 1.44
CDKN1A-203ENST00000405375 GAPVD1Q14C86 1478 aa24.06■■□□□ 1.44
CDKN1A-203ENST00000405375 AQRO60306 1485 aaKnown RBP eCLIP24.05■■□□□ 1.444e-7■■■■■ 34
CDKN1A-203ENST00000405375 FYCO1Q9BQS8 1478 aa24.05■■□□□ 1.44
CDKN1A-203ENST00000405375 CASKIN1Q8WXD9 1431 aa24.03■■□□□ 1.44
CDKN1A-203ENST00000405375 PHLDB1Q86UU1 1377 aa24.02■■□□□ 1.44
CDKN1A-203ENST00000405375 TARBP1Q13395 1621 aaKnown RBP24■■□□□ 1.43
CDKN1A-203ENST00000405375 FMN1Q68DA7 1419 aa23.96■■□□□ 1.43
CDKN1A-203ENST00000405375 SAMD9Q5K651 1589 aa23.95■■□□□ 1.43
CDKN1A-203ENST00000405375 SNAPC4Q5SXM2 1469 aa23.94■■□□□ 1.42
CDKN1A-203ENST00000405375 ITGAEP38570 1179 aa23.93■■□□□ 1.42
CDKN1A-203ENST00000405375 SCAF1Q9H7N4 1312 aaKnown RBP23.92■■□□□ 1.42
CDKN1A-203ENST00000405375 RAB3GAP2Q9H2M9 1393 aa23.91■■□□□ 1.42
CDKN1A-203ENST00000405375 ATP1B4Q9UN42 357 aaPredicted RBP23.89■■□□□ 1.42
CDKN1A-203ENST00000405375 SETD5Q9C0A6 1442 aa23.85■■□□□ 1.41
CDKN1A-203ENST00000405375 ACIN1Q9UKV3 1341 aaKnown RBP23.85■■□□□ 1.41
CDKN1A-203ENST00000405375 MRC2Q9UBG0 1479 aa23.84■■□□□ 1.41
CDKN1A-203ENST00000405375 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.84■■□□□ 1.41
CDKN1A-203ENST00000405375 PBRM1Q86U86 1689 aa23.83■■□□□ 1.4
CDKN1A-203ENST00000405375 NEUROD1Q13562 356 aa23.81■■□□□ 1.4
CDKN1A-203ENST00000405375 FAM50AQ14320 339 aaKnown RBP23.81■■□□□ 1.4
CDKN1A-203ENST00000405375 MAPKBP1O60336 1514 aa23.81■■□□□ 1.4
CDKN1A-203ENST00000405375 GRIN2BQ13224 1484 aa23.81■■□□□ 1.4
CDKN1A-203ENST00000405375 LRRIQ1Q96JM4 1722 aa23.79■■□□□ 1.4
CDKN1A-203ENST00000405375 THOC2Q8NI27 1593 aaKnown RBP23.79■■□□□ 1.4
CDKN1A-203ENST00000405375 ADAMTS12P58397 1594 aa23.76■■□□□ 1.39
CDKN1A-203ENST00000405375 CENPBP07199 599 aaPredicted RBP23.76■■□□□ 1.39
CDKN1A-203ENST00000405375 FGD6Q6ZV73 1430 aa23.75■■□□□ 1.39
CDKN1A-203ENST00000405375 MIER1Q8N108 512 aa23.75■■□□□ 1.39
CDKN1A-203ENST00000405375 MTUS2Q5JR59 1369 aa23.73■■□□□ 1.39
CDKN1A-203ENST00000405375 IQGAP2Q13576 1575 aa23.7■■□□□ 1.38
CDKN1A-203ENST00000405375 WDR62O43379 1518 aa23.69■■□□□ 1.38
CDKN1A-203ENST00000405375 IFT140Q96RY7 1462 aa23.68■■□□□ 1.38
CDKN1A-203ENST00000405375 NCOA2Q15596 1464 aa23.67■■□□□ 1.38
CDKN1A-203ENST00000405375 EHBP1L1Q8N3D4 1523 aa23.66■■□□□ 1.38
CDKN1A-203ENST00000405375 SUPT6HQ7KZ85 1726 aaKnown RBP23.64■■□□□ 1.37
CDKN1A-203ENST00000405375 ZNF608Q9ULD9 1512 aaPredicted RBP23.63■■□□□ 1.37
CDKN1A-203ENST00000405375 MYOM3Q5VTT5 1437 aa23.63■■□□□ 1.37
CDKN1A-203ENST00000405375 CCDC18Q5T9S5 1454 aa23.63■■□□□ 1.37
CDKN1A-203ENST00000405375 ARHGEF11O15085 1522 aa23.62■■□□□ 1.37
CDKN1A-203ENST00000405375 MAGI3Q5TCQ9 1506 aa23.61■■□□□ 1.37
CDKN1A-203ENST00000405375 UGGT2Q9NYU1 1516 aa23.59■■□□□ 1.37
CDKN1A-203ENST00000405375 HECW1Q76N89 1606 aa23.59■■□□□ 1.37
CDKN1A-203ENST00000405375 PTPRKQ15262 1439 aa23.59■■□□□ 1.37
CDKN1A-203ENST00000405375 HFM1A2PYH4 1435 aa23.56■■□□□ 1.36
CDKN1A-203ENST00000405375 EPRSP07814 1512 aaKnown RBP23.54■■□□□ 1.36
CDKN1A-203ENST00000405375 ERCC6Q03468 1493 aa23.54■■□□□ 1.36
CDKN1A-203ENST00000405375 SIN3AQ96ST3 1273 aa23.52■■□□□ 1.36
CDKN1A-203ENST00000405375 PTPN23Q9H3S7 1636 aa23.52■■□□□ 1.36
CDKN1A-203ENST00000405375 YTHDC1Q96MU7 727 aaKnown RBP23.51■■□□□ 1.35
CDKN1A-203ENST00000405375 TIMELESSQ9UNS1 1208 aa23.51■■□□□ 1.35
CDKN1A-203ENST00000405375 KIAA0586Q9BVV6 1533 aa23.51■■□□□ 1.35
CDKN1A-203ENST00000405375 GTF3C3Q9Y5Q9 886 aa23.5■■□□□ 1.35
CDKN1A-203ENST00000405375 EIF4G3O43432 1585 aaKnown RBP23.5■■□□□ 1.35
CDKN1A-203ENST00000405375 NAIPQ13075 1403 aa23.48■■□□□ 1.35
CDKN1A-203ENST00000405375 TCOF1Q13428 1488 aaKnown RBP23.48■■□□□ 1.35
CDKN1A-203ENST00000405375 CDK13Q14004 1512 aaKnown RBP23.47■■□□□ 1.35
CDKN1A-203ENST00000405375 UACAQ9BZF9 1416 aa23.46■■□□□ 1.35
CDKN1A-203ENST00000405375 GRIN2AQ12879 1464 aa23.46■■□□□ 1.35
CDKN1A-203ENST00000405375 DISP1Q96F81 1524 aa23.46■■□□□ 1.35
CDKN1A-203ENST00000405375 KIAA0556O60303 1618 aa23.45■■□□□ 1.34
CDKN1A-203ENST00000405375 MIA2Q96PC5 1412 aa23.4■■□□□ 1.34
CDKN1A-203ENST00000405375 MAGI1Q96QZ7 1491 aaPredicted RBP23.39■■□□□ 1.34
CDKN1A-203ENST00000405375 PPP1R15AO75807 674 aaPredicted RBP23.36■■□□□ 1.33
CDKN1A-203ENST00000405375 AKNAQ7Z591 1439 aa23.36■■□□□ 1.33
CDKN1A-203ENST00000405375 NUP153P49790 1475 aaKnown RBP23.35■■□□□ 1.33
CDKN1A-203ENST00000405375 GCC2Q8IWJ2 1684 aa23.34■■□□□ 1.33
CDKN1A-203ENST00000405375 SYNJ2O15056 1496 aa23.33■■□□□ 1.32
CDKN1A-203ENST00000405375 RAPGEF6Q8TEU7 1601 aa23.32■■□□□ 1.32
CDKN1A-203ENST00000405375 CEP170Q5SW79 1584 aa23.31■■□□□ 1.32
CDKN1A-203ENST00000405375 ARID3CA6NKF2 412 aa23.3■■□□□ 1.32
CDKN1A-203ENST00000405375 RRP7BPQ9NSQ0 103 aa23.28■■□□□ 1.32
CDKN1A-203ENST00000405375 TONSLQ96HA7 1378 aa23.27■■□□□ 1.32
CDKN1A-203ENST00000405375 CHMP7Q8WUX9 453 aaPredicted RBP23.26■■□□□ 1.31
CDKN1A-203ENST00000405375 CHIC2Q9UKJ5 165 aa23.25■■□□□ 1.31
CDKN1A-203ENST00000405375 NUP160Q12769 1436 aa23.24■■□□□ 1.31
CDKN1A-203ENST00000405375 KDM6BO15054 1643 aa23.23■■□□□ 1.31
CDKN1A-203ENST00000405375 DENND4BO75064 1496 aaPredicted RBP23.23■■□□□ 1.31
CDKN1A-203ENST00000405375 KDM5BQ9UGL1 1544 aa23.2■■□□□ 1.31
CDKN1A-203ENST00000405375 CDK11AQ9UQ88 783 aaPredicted RBP23.2■■□□□ 1.3
CDKN1A-203ENST00000405375 DAPK1P53355 1430 aa23.19■■□□□ 1.3
CDKN1A-203ENST00000405375 FBLN2P98095 1184 aa23.19■■□□□ 1.3
CDKN1A-203ENST00000405375 DNMT1P26358 1616 aaKnown RBP23.19■■□□□ 1.3
CDKN1A-203ENST00000405375 ROCK1Q13464 1354 aa23.18■■□□□ 1.3
CDKN1A-203ENST00000405375 PLB1Q6P1J6 1458 aa23.18■■□□□ 1.3
CDKN1A-203ENST00000405375 TROQ12816 1431 aaPredicted RBP23.17■■□□□ 1.3
CDKN1A-203ENST00000405375 ABCC5O15440 1437 aa23.16■■□□□ 1.3
CDKN1A-203ENST00000405375 CARMIL2Q6F5E8 1435 aa23.15■■□□□ 1.3
CDKN1A-203ENST00000405375 PRG4Q92954 1404 aaPredicted RBP23.15■■□□□ 1.3
CDKN1A-203ENST00000405375 DDX10Q13206 875 aaKnown RBP23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms