RNA–Protein interactions for RNA: ENST00000404970.3

VAMP2-202, Transcript of vesicle associated membrane protein 2, humanhuman

TSL 2 BASIC

Gene VAMP2, Length 1,479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-202ENST00000404970 RAPGEF2Q9Y4G8 1499 aa23.71■■□□□ 1.39
VAMP2-202ENST00000404970 PRXQ9BXM0 1461 aa23.69■■□□□ 1.38
VAMP2-202ENST00000404970 KIAA0586Q9BVV6 1533 aa23.66■■□□□ 1.38
VAMP2-202ENST00000404970 EEA1Q15075 1411 aa23.62■■□□□ 1.37
VAMP2-202ENST00000404970 CTTNBP2Q8WZ74 1663 aa23.61■■□□□ 1.37
VAMP2-202ENST00000404970 IQGAP2Q13576 1575 aa23.6■■□□□ 1.37
VAMP2-202ENST00000404970 PRG4Q92954 1404 aaPredicted RBP23.58■■□□□ 1.37
VAMP2-202ENST00000404970 CSRNP3Q8WYN3 585 aa23.58■■□□□ 1.37
VAMP2-202ENST00000404970 FAM9AQ8IZU1 332 aaPredicted RBP23.57■■□□□ 1.36
VAMP2-202ENST00000404970 JPH4Q96JJ6 628 aa23.56■■□□□ 1.36
VAMP2-202ENST00000404970 CYB5RLQ6IPT4 315 aa23.55■■□□□ 1.36
VAMP2-202ENST00000404970 KIF21BO75037 1637 aa23.51■■□□□ 1.35
VAMP2-202ENST00000404970 UGGT2Q9NYU1 1516 aa23.47■■□□□ 1.35
VAMP2-202ENST00000404970 DISP1Q96F81 1524 aa23.45■■□□□ 1.34
VAMP2-202ENST00000404970 KIAA0556O60303 1618 aa23.4■■□□□ 1.34
VAMP2-202ENST00000404970 ADCY10Q96PN6 1610 aa23.33■■□□□ 1.33
VAMP2-202ENST00000404970 CARMIL2Q6F5E8 1435 aa23.33■■□□□ 1.32
VAMP2-202ENST00000404970 GOLGA3Q08378 1498 aa23.3■■□□□ 1.32
VAMP2-202ENST00000404970 TNIKQ9UKE5 1360 aa23.29■■□□□ 1.32
VAMP2-202ENST00000404970 SAMD9Q5K651 1589 aa23.29■■□□□ 1.32
VAMP2-202ENST00000404970 EHMT2Q96KQ7 1210 aa23.29■■□□□ 1.32
VAMP2-202ENST00000404970 PTPRGP23470 1445 aa23.26■■□□□ 1.31
VAMP2-202ENST00000404970 TTBK1Q5TCY1 1321 aaPredicted RBP23.22■■□□□ 1.31
VAMP2-202ENST00000404970 ABCC2Q92887 1545 aa23.15■■□□□ 1.3
VAMP2-202ENST00000404970 ABCA8O94911 1581 aa23.14■■□□□ 1.3
VAMP2-202ENST00000404970 UHRF1BP1LA0JNW5 1464 aa23.14■■□□□ 1.3
VAMP2-202ENST00000404970 PLB1Q6P1J6 1458 aa23.14■■□□□ 1.3
VAMP2-202ENST00000404970 UACAQ9BZF9 1416 aa23.13■■□□□ 1.29
VAMP2-202ENST00000404970 UBTFP17480 764 aaKnown RBP23.13■■□□□ 1.29
VAMP2-202ENST00000404970 RANGAP1P46060 587 aaPredicted RBP23.13■■□□□ 1.29
VAMP2-202ENST00000404970 P3H3Q8IVL6 736 aa23.13■■□□□ 1.29
VAMP2-202ENST00000404970 EFCAB5A4FU69 1503 aa23.11■■□□□ 1.29
VAMP2-202ENST00000404970 FHOD3Q2V2M9 1422 aa23.11■■□□□ 1.29
VAMP2-202ENST00000404970 MAPKBP1O60336 1514 aa23.09■■□□□ 1.29
VAMP2-202ENST00000404970 KIF13AQ9H1H9 1805 aa23.08■■□□□ 1.28
VAMP2-202ENST00000404970 ZCCHC11Q5TAX3 1644 aaKnown RBP23.07■■□□□ 1.28
VAMP2-202ENST00000404970 ARHGAP35Q9NRY4 1499 aa23.06■■□□□ 1.28
VAMP2-202ENST00000404970 KDM5BQ9UGL1 1544 aa23.05■■□□□ 1.28
VAMP2-202ENST00000404970 RAPGEF6Q8TEU7 1601 aa23.02■■□□□ 1.28
VAMP2-202ENST00000404970 DIP2BQ9P265 1576 aa22.99■■□□□ 1.27
VAMP2-202ENST00000404970 TRHP20396 242 aaPredicted RBP22.99■■□□□ 1.27
VAMP2-202ENST00000404970 NPM1P06748 294 aaKnown RBP eCLIP22.96■■□□□ 1.27
VAMP2-202ENST00000404970 ASXL2Q76L83 1435 aa22.95■■□□□ 1.26
VAMP2-202ENST00000404970 ABCC10Q5T3U5 1492 aa22.95■■□□□ 1.26
VAMP2-202ENST00000404970 NUP153P49790 1475 aaKnown RBP22.93■■□□□ 1.26
VAMP2-202ENST00000404970 ATP10BO94823 1461 aa22.9■■□□□ 1.26
VAMP2-202ENST00000404970 LOC105371045A0A1W2PR82 267 aa22.9■■□□□ 1.26
VAMP2-202ENST00000404970 ARID3CA6NKF2 412 aa22.88■■□□□ 1.25
VAMP2-202ENST00000404970 CLIP1P30622 1438 aa22.88■■□□□ 1.25
VAMP2-202ENST00000404970 LRRIQ1Q96JM4 1722 aa22.87■■□□□ 1.25
VAMP2-202ENST00000404970 WDR7Q9Y4E6 1490 aa22.84■■□□□ 1.25
VAMP2-202ENST00000404970 EPRSP07814 1512 aaKnown RBP22.84■■□□□ 1.25
VAMP2-202ENST00000404970 PCF11O94913 1555 aaKnown RBP22.83■■□□□ 1.25
VAMP2-202ENST00000404970 FMN1Q68DA7 1419 aa22.83■■□□□ 1.25
VAMP2-202ENST00000404970 GLI2P10070 1586 aa22.83■■□□□ 1.24
VAMP2-202ENST00000404970 CEP162Q5TB80 1403 aa22.82■■□□□ 1.24
VAMP2-202ENST00000404970 CDK13Q14004 1512 aaKnown RBP22.82■■□□□ 1.24
VAMP2-202ENST00000404970 TSPOAP1O95153 1857 aa22.81■■□□□ 1.24
VAMP2-202ENST00000404970 PPRC1Q5VV67 1664 aaKnown RBP22.81■■□□□ 1.24
VAMP2-202ENST00000404970 FAM69CQ0P6D2 419 aa22.81■■□□□ 1.24
VAMP2-202ENST00000404970 HECW1Q76N89 1606 aa22.81■■□□□ 1.24
VAMP2-202ENST00000404970 MAP3K4Q9Y6R4 1608 aa22.79■■□□□ 1.24
VAMP2-202ENST00000404970 CASKIN1Q8WXD9 1431 aa22.72■■□□□ 1.23
VAMP2-202ENST00000404970 CFAP43Q8NDM7 1665 aa22.7■■□□□ 1.22
VAMP2-202ENST00000404970 FYCO1Q9BQS8 1478 aa22.69■■□□□ 1.22
VAMP2-202ENST00000404970 ABCA9Q8IUA7 1624 aa22.67■■□□□ 1.22
VAMP2-202ENST00000404970 KCNH8Q96L42 1107 aa22.66■■□□□ 1.22
VAMP2-202ENST00000404970 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.65■■□□□ 1.22
VAMP2-202ENST00000404970 HNRNPUL2Q1KMD3 747 aaKnown RBP22.65■■□□□ 1.22
VAMP2-202ENST00000404970 ATP1B4Q9UN42 357 aaPredicted RBP22.65■■□□□ 1.22
VAMP2-202ENST00000404970 MAGI3Q5TCQ9 1506 aa22.63■■□□□ 1.21
VAMP2-202ENST00000404970 TTC37Q6PGP7 1564 aa22.62■■□□□ 1.21
VAMP2-202ENST00000404970 KIF14Q15058 1648 aa22.61■■□□□ 1.21
VAMP2-202ENST00000404970 CCDC18Q5T9S5 1454 aa22.6■■□□□ 1.21
VAMP2-202ENST00000404970 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.59■■□□□ 1.21
VAMP2-202ENST00000404970 CD109Q6YHK3 1445 aa22.58■■□□□ 1.21
VAMP2-202ENST00000404970 KDM6BO15054 1643 aa22.56■■□□□ 1.2
VAMP2-202ENST00000404970 PLEKHD1A6NEE1 506 aa22.55■■□□□ 1.2
VAMP2-202ENST00000404970 TROQ12816 1431 aaPredicted RBP22.54■■□□□ 1.2
VAMP2-202ENST00000404970 VPS8Q8N3P4 1428 aa22.52■■□□□ 1.2
VAMP2-202ENST00000404970 TEX14Q8IWB6 1497 aa22.52■■□□□ 1.2
VAMP2-202ENST00000404970 COL17A1Q9UMD9 1497 aaPredicted RBP22.52■■□□□ 1.2
VAMP2-202ENST00000404970 MYO5CQ9NQX4 1742 aa22.47■■□□□ 1.19
VAMP2-202ENST00000404970 TIAM1Q13009 1591 aa22.43■■□□□ 1.18
VAMP2-202ENST00000404970 CDK11AQ9UQ88 783 aaPredicted RBP22.43■■□□□ 1.18
VAMP2-202ENST00000404970 CDC42BPBQ9Y5S2 1711 aa22.41■■□□□ 1.18
VAMP2-202ENST00000404970 CDC42BPAQ5VT25 1732 aa22.41■■□□□ 1.18
VAMP2-202ENST00000404970 AEBP2Q6ZN18 517 aaPredicted RBP22.4■■□□□ 1.18
VAMP2-202ENST00000404970 NEO1Q92859 1461 aa22.39■■□□□ 1.18
VAMP2-202ENST00000404970 PREX2Q70Z35 1606 aa22.39■■□□□ 1.17
VAMP2-202ENST00000404970 FRMPD1Q5SYB0 1578 aa22.39■■□□□ 1.17
VAMP2-202ENST00000404970 EHBP1L1Q8N3D4 1523 aa22.38■■□□□ 1.17
VAMP2-202ENST00000404970 ARAP3Q8WWN8 1544 aa22.38■■□□□ 1.17
VAMP2-202ENST00000404970 CFAP74Q9C0B2 1584 aa22.38■■□□□ 1.17
VAMP2-202ENST00000404970 PLCH2O75038 1416 aa22.37■■□□□ 1.17
VAMP2-202ENST00000404970 FANCAO15360 1455 aa22.37■■□□□ 1.17
VAMP2-202ENST00000404970 RICTORQ6R327 1708 aa22.34■■□□□ 1.17
VAMP2-202ENST00000404970 MTUS2Q5JR59 1369 aa22.33■■□□□ 1.17
VAMP2-202ENST00000404970 AKNAQ7Z591 1439 aa22.32■■□□□ 1.16
VAMP2-202ENST00000404970 MAP3K1Q13233 1512 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms