RNA–Protein interactions for RNA: ENST00000402738.5

HERC3-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-202ENST00000402738 ARID4BQ4LE39 1312 aaPredicted RBP12.93□□□□□ -0.34
HERC3-202ENST00000402738 ABCC9O60706 1549 aa12.92□□□□□ -0.34
HERC3-202ENST00000402738 EIF4G2P78344 907 aaKnown RBP eCLIP12.91□□□□□ -0.34
HERC3-202ENST00000402738 NCLP19338 710 aaKnown RBP12.91□□□□□ -0.34
HERC3-202ENST00000402738 DNTTIP2Q5QJE6 756 aaKnown RBP12.91□□□□□ -0.34
HERC3-202ENST00000402738 WDR43Q15061 677 aaKnown RBP eCLIP12.91□□□□□ -0.34
HERC3-202ENST00000402738 GOLGA6L22H0YM25 854 aa12.9□□□□□ -0.34
HERC3-202ENST00000402738 PTMAP06454 111 aaKnown RBP12.9□□□□□ -0.34
HERC3-202ENST00000402738 CDK11BP21127 795 aaKnown RBP12.88□□□□□ -0.35
HERC3-202ENST00000402738 CHIC2Q9UKJ5 165 aa12.87□□□□□ -0.35
HERC3-202ENST00000402738 RGS3P49796 1198 aa12.87□□□□□ -0.35
HERC3-202ENST00000402738 ZNF777Q9ULD5 760 aaPredicted RBP12.87□□□□□ -0.35
HERC3-202ENST00000402738 AMER1Q5JTC6 1135 aaPredicted RBP12.85□□□□□ -0.35
HERC3-202ENST00000402738 CEP162Q5TB80 1403 aa12.83□□□□□ -0.35
HERC3-202ENST00000402738 L1TD1Q5T7N2 865 aaKnown RBP12.83□□□□□ -0.36
HERC3-202ENST00000402738 CLIP1P30622 1438 aa12.82□□□□□ -0.36
HERC3-202ENST00000402738 PNNQ9H307 717 aaKnown RBP12.81□□□□□ -0.36
HERC3-202ENST00000402738 KDM2AQ9Y2K7 1162 aa12.8□□□□□ -0.36
HERC3-202ENST00000402738 PABPN1Q86U42 306 aaKnown RBP eCLIP12.79□□□□□ -0.36
HERC3-202ENST00000402738 SIN3AQ96ST3 1273 aa12.79□□□□□ -0.36
HERC3-202ENST00000402738 IPO9Q96P70 1041 aaKnown RBP12.78□□□□□ -0.36
HERC3-202ENST00000402738 ARID3AQ99856 593 aa12.78□□□□□ -0.36
HERC3-202ENST00000402738 CCER2I3L3R5 266 aa12.77□□□□□ -0.36
HERC3-202ENST00000402738 TPRNQ4KMQ1 711 aa12.77□□□□□ -0.37
HERC3-202ENST00000402738 VSIG10Q8N0Z9 540 aa12.77□□□□□ -0.37
HERC3-202ENST00000402738 MSNP26038 577 aaKnown RBP12.75□□□□□ -0.37
HERC3-202ENST00000402738 MYH16Q9H6N6 1097 aa12.73□□□□□ -0.37
HERC3-202ENST00000402738 SPRYD3Q8NCJ5 442 aa12.73□□□□□ -0.37
HERC3-202ENST00000402738 PLCB2Q00722 1185 aa12.72□□□□□ -0.37
HERC3-202ENST00000402738 GZF1Q9H116 711 aaPredicted RBP12.71□□□□□ -0.37
HERC3-202ENST00000402738 PRKCSHP14314 528 aaPredicted RBP12.71□□□□□ -0.37
HERC3-202ENST00000402738 HSP90AA2PQ14568 343 aaPredicted RBP12.71□□□□□ -0.37
HERC3-202ENST00000402738 RSPH6AQ9H0K4 717 aa12.71□□□□□ -0.37
HERC3-202ENST00000402738 RRP7BPQ9NSQ0 103 aa12.71□□□□□ -0.38
HERC3-202ENST00000402738 HSP90AB1P08238 724 aaKnown RBP12.7□□□□□ -0.38
HERC3-202ENST00000402738 SLKQ9H2G2 1235 aaPredicted RBP12.67□□□□□ -0.38
HERC3-202ENST00000402738 ANO8Q9HCE9 1232 aaPredicted RBP12.67□□□□□ -0.38
HERC3-202ENST00000402738 ZBTB7CA1YPR0 619 aa12.67□□□□□ -0.38
HERC3-202ENST00000402738 TIMELESSQ9UNS1 1208 aa12.67□□□□□ -0.38
HERC3-202ENST00000402738 FANCIQ9NVI1 1328 aa12.66□□□□□ -0.38
HERC3-202ENST00000402738 TCERG1O14776 1098 aaKnown RBP12.66□□□□□ -0.38
HERC3-202ENST00000402738 GOLGA3Q08378 1498 aa12.65□□□□□ -0.38
HERC3-202ENST00000402738 HSCBQ8IWL3 235 aa12.65□□□□□ -0.38
HERC3-202ENST00000402738 ZCCHC6Q5VYS8 1495 aaKnown RBP12.65□□□□□ -0.39
HERC3-202ENST00000402738 KCNH8Q96L42 1107 aa12.64□□□□□ -0.39
HERC3-202ENST00000402738 MTUS2Q5JR59 1369 aa12.64□□□□□ -0.39
HERC3-202ENST00000402738 FRAT1Q92837 279 aaPredicted RBP12.64□□□□□ -0.39
HERC3-202ENST00000402738 CHGAP10645 457 aaKnown RBP12.64□□□□□ -0.39
HERC3-202ENST00000402738 TNIKQ9UKE5 1360 aa12.64□□□□□ -0.39
HERC3-202ENST00000402738 FBLN2P98095 1184 aa12.64□□□□□ -0.39
HERC3-202ENST00000402738 GOLGA6L3A6NEY3 463 aa12.63□□□□□ -0.39
HERC3-202ENST00000402738 CHAF1AQ13111 956 aaPredicted RBP12.63□□□□□ -0.39
HERC3-202ENST00000402738 FTSJ3Q8IY81 847 aaKnown RBP12.63□□□□□ -0.39
HERC3-202ENST00000402738 USP35Q9P2H5 1018 aa12.63□□□□□ -0.39
HERC3-202ENST00000402738 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.62□□□□□ -0.39
HERC3-202ENST00000402738 GSE1Q14687 1217 aa12.61□□□□□ -0.39
HERC3-202ENST00000402738 NEUROD2Q15784 382 aa12.6□□□□□ -0.39
HERC3-202ENST00000402738 CASC1Q6TDU7 716 aa12.58□□□□□ -0.4
HERC3-202ENST00000402738 ZRSR1Q15695 479 aaKnown RBP12.57□□□□□ -0.4
HERC3-202ENST00000402738 CARD11Q9BXL7 1154 aa12.57□□□□□ -0.4
HERC3-202ENST00000402738 KNSTRNQ9Y448 316 aa12.56□□□□□ -0.4
HERC3-202ENST00000402738 EEA1Q15075 1411 aa12.56□□□□□ -0.4
HERC3-202ENST00000402738 RCAN3Q9UKA8 241 aa12.56□□□□□ -0.4
HERC3-202ENST00000402738 SCRIBQ14160 1630 aa12.55□□□□□ -0.4
HERC3-202ENST00000402738 SLC4A3P48751 1232 aa12.55□□□□□ -0.4
HERC3-202ENST00000402738 CC2D1BQ5T0F9 858 aaKnown RBP12.55□□□□□ -0.4
HERC3-202ENST00000402738 HSPA5P11021 654 aaKnown RBP12.54□□□□□ -0.4
HERC3-202ENST00000402738 GBP4Q96PP9 640 aa12.54□□□□□ -0.4
HERC3-202ENST00000402738 PKNOX2Q96KN3 472 aa12.53□□□□□ -0.4
HERC3-202ENST00000402738 RGL3Q3MIN7 710 aa12.53□□□□□ -0.4
HERC3-202ENST00000402738 KIAA2012Q0VF49 1180 aa12.52□□□□□ -0.41
HERC3-202ENST00000402738 NUDCQ9Y266 331 aa12.52□□□□□ -0.41
HERC3-202ENST00000402738 CCNB3Q8WWL7 1395 aa12.51□□□□□ -0.41
HERC3-202ENST00000402738 TNNT3P45378 269 aaPredicted RBP12.51□□□□□ -0.41
HERC3-202ENST00000402738 IL27Q8NEV9 243 aa12.51□□□□□ -0.41
HERC3-202ENST00000402738 PDE4AP27815 886 aa12.5□□□□□ -0.41
HERC3-202ENST00000402738 TSPY4P0CV99 314 aa12.5□□□□□ -0.41
HERC3-202ENST00000402738 TSPY10P0CW01 314 aa12.5□□□□□ -0.41
HERC3-202ENST00000402738 RB1CC1Q8TDY2 1594 aa12.49□□□□□ -0.41
HERC3-202ENST00000402738 DRC7Q8IY82 874 aa12.49□□□□□ -0.41
HERC3-202ENST00000402738 GOLGA6L6A8MZA4 724 aa12.49□□□□□ -0.41
HERC3-202ENST00000402738 CFAP53Q96M91 514 aa12.48□□□□□ -0.41
HERC3-202ENST00000402738 RSF1Q96T23 1441 aaPredicted RBP12.48□□□□□ -0.41
HERC3-202ENST00000402738 PTMSP20962 102 aa12.47□□□□□ -0.41
HERC3-202ENST00000402738 NACADO15069 1562 aa12.46□□□□□ -0.42
HERC3-202ENST00000402738 A0A0U1RQG5 324 aaPredicted RBP12.46□□□□□ -0.42
HERC3-202ENST00000402738 NRDCO43847 1150 aa12.46□□□□□ -0.42
HERC3-202ENST00000402738 CEP164Q9UPV0 1460 aa12.45□□□□□ -0.42
HERC3-202ENST00000402738 MS4A1P11836 297 aa12.44□□□□□ -0.42
HERC3-202ENST00000402738 BRPF3Q9ULD4 1205 aa12.44□□□□□ -0.42
HERC3-202ENST00000402738 GOLGA6L4A6NEF3 574 aa12.43□□□□□ -0.42
HERC3-202ENST00000402738 MFAP1P55081 439 aaKnown RBP12.43□□□□□ -0.42
HERC3-202ENST00000402738 CDCA8Q53HL2 280 aa12.43□□□□□ -0.42
HERC3-202ENST00000402738 SETD5Q9C0A6 1442 aa12.43□□□□□ -0.42
HERC3-202ENST00000402738 FAM13BQ9NYF5 915 aa12.41□□□□□ -0.42
HERC3-202ENST00000402738 FOXD4L1Q9NU39 408 aa12.41□□□□□ -0.42
HERC3-202ENST00000402738 STAG3Q9UJ98 1225 aa12.41□□□□□ -0.42
HERC3-202ENST00000402738 MAPK8IP3Q9UPT6 1336 aa12.41□□□□□ -0.42
HERC3-202ENST00000402738 PPP1R15AO75807 674 aaPredicted RBP12.4□□□□□ -0.42
HERC3-202ENST00000402738 CALD1Q05682 793 aaKnown RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 141.5 ms