RNA–Protein interactions for RNA: ENST00000402554.7

NDEL1-203, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5 BASIC

Gene NDEL1, Length 1,858 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-203ENST00000402554 ERCC6L2Q5T890 1561 aa21.15■□□□□ 0.98
NDEL1-203ENST00000402554 SHROOM2Q13796 1616 aa21.14■□□□□ 0.97
NDEL1-203ENST00000402554 EEA1Q15075 1411 aa21.12■□□□□ 0.97
NDEL1-203ENST00000402554 RAPGEF2Q9Y4G8 1499 aa21.08■□□□□ 0.97
NDEL1-203ENST00000402554 CYB5RLQ6IPT4 315 aa21.08■□□□□ 0.97
NDEL1-203ENST00000402554 KIAA0586Q9BVV6 1533 aa21.04■□□□□ 0.96
NDEL1-203ENST00000402554 PRG4Q92954 1404 aaPredicted RBP21.02■□□□□ 0.96
NDEL1-203ENST00000402554 PRXQ9BXM0 1461 aa21.02■□□□□ 0.96
NDEL1-203ENST00000402554 EHMT2Q96KQ7 1210 aa21.01■□□□□ 0.95
NDEL1-203ENST00000402554 JPH4Q96JJ6 628 aa21.01■□□□□ 0.95
NDEL1-203ENST00000402554 CSRNP3Q8WYN3 585 aa21■□□□□ 0.95
NDEL1-203ENST00000402554 IQGAP2Q13576 1575 aa20.99■□□□□ 0.95
NDEL1-203ENST00000402554 CTTNBP2Q8WZ74 1663 aa20.98■□□□□ 0.95
NDEL1-203ENST00000402554 KIF21BO75037 1637 aa20.85■□□□□ 0.93
NDEL1-203ENST00000402554 GOLGA3Q08378 1498 aa20.84■□□□□ 0.93
NDEL1-203ENST00000402554 UGGT2Q9NYU1 1516 aa20.84■□□□□ 0.93
NDEL1-203ENST00000402554 DISP1Q96F81 1524 aa20.84■□□□□ 0.93
NDEL1-203ENST00000402554 TTBK1Q5TCY1 1321 aaPredicted RBP20.83■□□□□ 0.93
NDEL1-203ENST00000402554 KIAA0556O60303 1618 aa20.81■□□□□ 0.92
NDEL1-203ENST00000402554 CARMIL2Q6F5E8 1435 aa20.8■□□□□ 0.92
NDEL1-203ENST00000402554 TNIKQ9UKE5 1360 aa20.8■□□□□ 0.92
NDEL1-203ENST00000402554 UBTFP17480 764 aaKnown RBP20.76■□□□□ 0.91
NDEL1-203ENST00000402554 ADCY10Q96PN6 1610 aa20.76■□□□□ 0.91
NDEL1-203ENST00000402554 PTPRGP23470 1445 aa20.74■□□□□ 0.91
NDEL1-203ENST00000402554 CEP162Q5TB80 1403 aa20.71■□□□□ 0.91
NDEL1-203ENST00000402554 RANGAP1P46060 587 aaPredicted RBP20.71■□□□□ 0.91
NDEL1-203ENST00000402554 SAMD9Q5K651 1589 aa20.68■□□□□ 0.9
NDEL1-203ENST00000402554 P3H3Q8IVL6 736 aa20.66■□□□□ 0.9
NDEL1-203ENST00000402554 TRHP20396 242 aaPredicted RBP20.65■□□□□ 0.9
NDEL1-203ENST00000402554 ABCC2Q92887 1545 aa20.61■□□□□ 0.89
NDEL1-203ENST00000402554 UACAQ9BZF9 1416 aa20.61■□□□□ 0.89
NDEL1-203ENST00000402554 PLB1Q6P1J6 1458 aa20.6■□□□□ 0.89
NDEL1-203ENST00000402554 UHRF1BP1LA0JNW5 1464 aa20.57■□□□□ 0.88
NDEL1-203ENST00000402554 FHOD3Q2V2M9 1422 aa20.57■□□□□ 0.88
NDEL1-203ENST00000402554 ABCA8O94911 1581 aa20.56■□□□□ 0.88
NDEL1-203ENST00000402554 NPM1P06748 294 aaKnown RBP eCLIP20.56■□□□□ 0.88
NDEL1-203ENST00000402554 KIF13AQ9H1H9 1805 aa20.55■□□□□ 0.88
NDEL1-203ENST00000402554 MAPKBP1O60336 1514 aa20.55■□□□□ 0.88
NDEL1-203ENST00000402554 ZCCHC11Q5TAX3 1644 aaKnown RBP20.54■□□□□ 0.88
NDEL1-203ENST00000402554 PCGF6Q9BYE7 350 aa20.54■□□□□ 0.88
NDEL1-203ENST00000402554 EFCAB5A4FU69 1503 aa20.54■□□□□ 0.88
NDEL1-203ENST00000402554 CLIP1P30622 1438 aa20.52■□□□□ 0.87
NDEL1-203ENST00000402554 KDM5BQ9UGL1 1544 aa20.5■□□□□ 0.87
NDEL1-203ENST00000402554 TRIM26Q12899 539 aaPredicted RBP20.5■□□□□ 0.87
NDEL1-203ENST00000402554 DIP2BQ9P265 1576 aa20.48■□□□□ 0.87
NDEL1-203ENST00000402554 RAPGEF6Q8TEU7 1601 aa20.48■□□□□ 0.87
NDEL1-203ENST00000402554 ARHGAP35Q9NRY4 1499 aa20.48■□□□□ 0.87
NDEL1-203ENST00000402554 ARID3CA6NKF2 412 aa20.46■□□□□ 0.87
NDEL1-203ENST00000402554 ASXL2Q76L83 1435 aa20.46■□□□□ 0.87
NDEL1-203ENST00000402554 ABCC10Q5T3U5 1492 aa20.45■□□□□ 0.86
NDEL1-203ENST00000402554 FAM69CQ0P6D2 419 aa20.4■□□□□ 0.86
NDEL1-203ENST00000402554 NUP153P49790 1475 aaKnown RBP20.38■□□□□ 0.85
NDEL1-203ENST00000402554 TSPOAP1O95153 1857 aa20.38■□□□□ 0.85
NDEL1-203ENST00000402554 ATP10BO94823 1461 aa20.37■□□□□ 0.85
NDEL1-203ENST00000402554 VPS8Q8N3P4 1428 aa20.35■□□□□ 0.85
NDEL1-203ENST00000402554 WDR7Q9Y4E6 1490 aa20.35■□□□□ 0.85
NDEL1-203ENST00000402554 PPARGC1BQ86YN6 1023 aaKnown RBP20.34■□□□□ 0.85
NDEL1-203ENST00000402554 EPRSP07814 1512 aaKnown RBP20.34■□□□□ 0.85
NDEL1-203ENST00000402554 FMN1Q68DA7 1419 aa20.31■□□□□ 0.84
NDEL1-203ENST00000402554 GLI2P10070 1586 aa20.31■□□□□ 0.84
NDEL1-203ENST00000402554 CDK13Q14004 1512 aaKnown RBP20.3■□□□□ 0.84
NDEL1-203ENST00000402554 PCF11O94913 1555 aaKnown RBP20.29■□□□□ 0.84
NDEL1-203ENST00000402554 HECW1Q76N89 1606 aa20.29■□□□□ 0.84
NDEL1-203ENST00000402554 LRRIQ1Q96JM4 1722 aa20.29■□□□□ 0.84
NDEL1-203ENST00000402554 PPRC1Q5VV67 1664 aaKnown RBP20.29■□□□□ 0.84
NDEL1-203ENST00000402554 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.28■□□□□ 0.84
NDEL1-203ENST00000402554 HNRNPUL2Q1KMD3 747 aaKnown RBP20.28■□□□□ 0.84
NDEL1-203ENST00000402554 MAP3K4Q9Y6R4 1608 aa20.27■□□□□ 0.84
NDEL1-203ENST00000402554 ATP1B4Q9UN42 357 aaPredicted RBP20.27■□□□□ 0.84
NDEL1-203ENST00000402554 KCNH8Q96L42 1107 aa20.26■□□□□ 0.83
NDEL1-203ENST00000402554 CFAP43Q8NDM7 1665 aa20.2■□□□□ 0.82
NDEL1-203ENST00000402554 APLP2Q06481 763 aa20.19■□□□□ 0.82
NDEL1-203ENST00000402554 CASKIN1Q8WXD9 1431 aa20.18■□□□□ 0.82
NDEL1-203ENST00000402554 ABCA9Q8IUA7 1624 aa20.16■□□□□ 0.82
NDEL1-203ENST00000402554 FYCO1Q9BQS8 1478 aa20.15■□□□□ 0.82
NDEL1-203ENST00000402554 KDM6BO15054 1643 aa20.15■□□□□ 0.82
NDEL1-203ENST00000402554 CD109Q6YHK3 1445 aa20.14■□□□□ 0.82
NDEL1-203ENST00000402554 PLEKHD1A6NEE1 506 aa20.13■□□□□ 0.81
NDEL1-203ENST00000402554 TTC37Q6PGP7 1564 aa20.11■□□□□ 0.81
NDEL1-203ENST00000402554 KIF14Q15058 1648 aa20.1■□□□□ 0.81
NDEL1-203ENST00000402554 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.1■□□□□ 0.81
NDEL1-203ENST00000402554 CCDC18Q5T9S5 1454 aa20.1■□□□□ 0.81
NDEL1-203ENST00000402554 TEX14Q8IWB6 1497 aa20.1■□□□□ 0.81
NDEL1-203ENST00000402554 MAGI3Q5TCQ9 1506 aa20.09■□□□□ 0.81
NDEL1-203ENST00000402554 HRCP23327 699 aa20.07■□□□□ 0.8
NDEL1-203ENST00000402554 COL17A1Q9UMD9 1497 aaPredicted RBP20.04■□□□□ 0.8
NDEL1-203ENST00000402554 TROQ12816 1431 aaPredicted RBP20.04■□□□□ 0.8
NDEL1-203ENST00000402554 CDK11AQ9UQ88 783 aaPredicted RBP20.01■□□□□ 0.79
NDEL1-203ENST00000402554 MYO5CQ9NQX4 1742 aa19.99■□□□□ 0.79
NDEL1-203ENST00000402554 MAP3K1Q13233 1512 aa19.96■□□□□ 0.79
NDEL1-203ENST00000402554 FANCAO15360 1455 aa19.94■□□□□ 0.78
NDEL1-203ENST00000402554 KANK4Q5T7N3 995 aaPredicted RBP19.94■□□□□ 0.78
NDEL1-203ENST00000402554 CFAP74Q9C0B2 1584 aa19.93■□□□□ 0.78
NDEL1-203ENST00000402554 NEO1Q92859 1461 aa19.93■□□□□ 0.78
NDEL1-203ENST00000402554 TIAM1Q13009 1591 aa19.92■□□□□ 0.78
NDEL1-203ENST00000402554 CDC42BPBQ9Y5S2 1711 aa19.91■□□□□ 0.78
NDEL1-203ENST00000402554 ARAP3Q8WWN8 1544 aa19.91■□□□□ 0.78
NDEL1-203ENST00000402554 CDC42BPAQ5VT25 1732 aa19.91■□□□□ 0.78
NDEL1-203ENST00000402554 PLCH2O75038 1416 aa19.91■□□□□ 0.78
NDEL1-203ENST00000402554 PREX2Q70Z35 1606 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms