RNA–Protein interactions for RNA: ENST00000401813.7

FAAP20-205, Transcript of FA core complex associated protein 20, humanhuman

TSL 1 (best)

Gene FAAP20, Length 2,543 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAAP20-205ENST00000401813 ANP32EQ9BTT0 268 aa27.3■■□□□ 1.96
FAAP20-205ENST00000401813 DDX10Q13206 875 aaKnown RBP27.28■■□□□ 1.96
FAAP20-205ENST00000401813 BCANQ96GW7 911 aa27.26■■□□□ 1.95
FAAP20-205ENST00000401813 SIN3AQ96ST3 1273 aa27.24■■□□□ 1.95
FAAP20-205ENST00000401813 CADPSQ9ULU8 1353 aa27.24■■□□□ 1.95
FAAP20-205ENST00000401813 LRRC9Q6ZRR7 1453 aa27.24■■□□□ 1.95
FAAP20-205ENST00000401813 FKBP8Q14318 412 aa27.23■■□□□ 1.95
FAAP20-205ENST00000401813 PHLDB1Q86UU1 1377 aa27.22■■□□□ 1.95
FAAP20-205ENST00000401813 IGF1RP08069 1367 aa27.22■■□□□ 1.95
FAAP20-205ENST00000401813 PPP1R15AO75807 674 aaPredicted RBP27.19■■□□□ 1.94
FAAP20-205ENST00000401813 FAM50AQ14320 339 aaKnown RBP27.15■■□□□ 1.94
FAAP20-205ENST00000401813 TIMELESSQ9UNS1 1208 aa27.13■■□□□ 1.93
FAAP20-205ENST00000401813 CARMIL1Q5VZK9 1371 aa27.11■■□□□ 1.93
FAAP20-205ENST00000401813 CFAP43Q8NDM7 1665 aa27.09■■□□□ 1.93
FAAP20-205ENST00000401813 CCER2I3L3R5 266 aa27.07■■□□□ 1.92
FAAP20-205ENST00000401813 FHAD1B1AJZ9 1412 aa27.07■■□□□ 1.92
FAAP20-205ENST00000401813 HIRIP3Q9BW71 556 aaPredicted RBP27.06■■□□□ 1.92
FAAP20-205ENST00000401813 PCF11O94913 1555 aaKnown RBP27.04■■□□□ 1.92
FAAP20-205ENST00000401813 NEFLP07196 543 aa27.04■■□□□ 1.92
FAAP20-205ENST00000401813 ANP32CO43423 234 aa27.01■■□□□ 1.91
FAAP20-205ENST00000401813 TRIM52Q96A61 297 aa27■■□□□ 1.91
FAAP20-205ENST00000401813 FGD5Q6ZNL6 1462 aa26.97■■□□□ 1.91
FAAP20-205ENST00000401813 P3H3Q8IVL6 736 aa26.97■■□□□ 1.91
FAAP20-205ENST00000401813 RBM19Q9Y4C8 960 aaKnown RBP26.96■■□□□ 1.91
FAAP20-205ENST00000401813 FANCD2Q9BXW9 1451 aa26.96■■□□□ 1.91
FAAP20-205ENST00000401813 ATP1B4Q9UN42 357 aaPredicted RBP26.95■■□□□ 1.9
FAAP20-205ENST00000401813 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.92■■□□□ 1.91e-7■■■■□ 21
FAAP20-205ENST00000401813 FHOD3Q2V2M9 1422 aa26.88■■□□□ 1.89
FAAP20-205ENST00000401813 FYCO1Q9BQS8 1478 aa26.87■■□□□ 1.89
FAAP20-205ENST00000401813 TONSLQ96HA7 1378 aa26.86■■□□□ 1.89
FAAP20-205ENST00000401813 CASKIN1Q8WXD9 1431 aa26.83■■□□□ 1.89
FAAP20-205ENST00000401813 DNMBPQ6XZF7 1577 aa26.82■■□□□ 1.88
FAAP20-205ENST00000401813 NESP48681 1621 aa26.82■■□□□ 1.88
FAAP20-205ENST00000401813 AQRO60306 1485 aaKnown RBP eCLIP26.8■■□□□ 1.882e-6■■□□□ 13.2
FAAP20-205ENST00000401813 CCDC18Q5T9S5 1454 aa26.8■■□□□ 1.88
FAAP20-205ENST00000401813 EFCAB5A4FU69 1503 aa26.79■■□□□ 1.88
FAAP20-205ENST00000401813 FGD6Q6ZV73 1430 aa26.79■■□□□ 1.88
FAAP20-205ENST00000401813 TOPBP1Q92547 1522 aa26.76■■□□□ 1.87
FAAP20-205ENST00000401813 UACAQ9BZF9 1416 aa26.75■■□□□ 1.87
FAAP20-205ENST00000401813 BCL11AQ9H165 835 aa26.74■■□□□ 1.87
FAAP20-205ENST00000401813 LAMC3Q9Y6N6 1575 aa26.74■■□□□ 1.87
FAAP20-205ENST00000401813 HFM1A2PYH4 1435 aa26.72■■□□□ 1.87
FAAP20-205ENST00000401813 PTPRKQ15262 1439 aa26.72■■□□□ 1.87
FAAP20-205ENST00000401813 PTPN23Q9H3S7 1636 aa26.71■■□□□ 1.87
FAAP20-205ENST00000401813 POLA1P09884 1462 aaPredicted RBP26.7■■□□□ 1.87
FAAP20-205ENST00000401813 ABCA10Q8WWZ4 1543 aa26.7■■□□□ 1.86
FAAP20-205ENST00000401813 RAD54L2Q9Y4B4 1467 aa26.69■■□□□ 1.86
FAAP20-205ENST00000401813 HNRNPUQ00839 825 aaKnown RBP eCLIP26.66■■□□□ 1.86
FAAP20-205ENST00000401813 KDM5BQ9UGL1 1544 aa26.65■■□□□ 1.86
FAAP20-205ENST00000401813 FMN1Q68DA7 1419 aa26.65■■□□□ 1.86
FAAP20-205ENST00000401813 CTTNBP2Q8WZ74 1663 aa26.65■■□□□ 1.86
FAAP20-205ENST00000401813 MSH5O43196 834 aa26.65■■□□□ 1.86
FAAP20-205ENST00000401813 SNAPC4Q5SXM2 1469 aa26.64■■□□□ 1.86
FAAP20-205ENST00000401813 NAIPQ13075 1403 aa26.63■■□□□ 1.85
FAAP20-205ENST00000401813 MTUS2Q5JR59 1369 aa26.63■■□□□ 1.85
FAAP20-205ENST00000401813 CUL7Q14999 1698 aa26.6■■□□□ 1.85
FAAP20-205ENST00000401813 URB2Q14146 1524 aaKnown RBP26.59■■□□□ 1.85
FAAP20-205ENST00000401813 IRX6P78412 446 aaPredicted RBP26.58■■□□□ 1.85
FAAP20-205ENST00000401813 MYOM3Q5VTT5 1437 aa26.55■■□□□ 1.84
FAAP20-205ENST00000401813 NCOA2Q15596 1464 aa26.55■■□□□ 1.84
FAAP20-205ENST00000401813 DNAJC5BQ9UF47 199 aa26.55■■□□□ 1.84
FAAP20-205ENST00000401813 CDK11AQ9UQ88 783 aaPredicted RBP26.55■■□□□ 1.84
FAAP20-205ENST00000401813 FANCIQ9NVI1 1328 aa26.55■■□□□ 1.84
FAAP20-205ENST00000401813 WASHC2AQ641Q2 1341 aa26.54■■□□□ 1.84
FAAP20-205ENST00000401813 LRRIQ1Q96JM4 1722 aa26.54■■□□□ 1.84
FAAP20-205ENST00000401813 PDS5BQ9NTI5 1447 aa26.53■■□□□ 1.84
FAAP20-205ENST00000401813 HSPA5P11021 654 aaKnown RBP26.52■■□□□ 1.84
FAAP20-205ENST00000401813 SUPT6HQ7KZ85 1726 aaKnown RBP26.47■■□□□ 1.83
FAAP20-205ENST00000401813 SAMD9Q5K651 1589 aa26.47■■□□□ 1.83
FAAP20-205ENST00000401813 GRIN2BQ13224 1484 aa26.46■■□□□ 1.83
FAAP20-205ENST00000401813 ERICH6BQ5W0A0 696 aa26.45■■□□□ 1.82
FAAP20-205ENST00000401813 KIF21AQ7Z4S6 1674 aa26.44■■□□□ 1.82
FAAP20-205ENST00000401813 EHBP1L1Q8N3D4 1523 aa26.43■■□□□ 1.82
FAAP20-205ENST00000401813 DENND4BO75064 1496 aaPredicted RBP26.42■■□□□ 1.82
FAAP20-205ENST00000401813 CNTLNQ9NXG0 1405 aa26.41■■□□□ 1.82
FAAP20-205ENST00000401813 THOC2Q8NI27 1593 aaKnown RBP26.41■■□□□ 1.82
FAAP20-205ENST00000401813 EIF4G2P78344 907 aaKnown RBP eCLIP26.41■■□□□ 1.82
FAAP20-205ENST00000401813 CCDC184Q52MB2 194 aa26.41■■□□□ 1.82
FAAP20-205ENST00000401813 RRP7BPQ9NSQ0 103 aa26.41■■□□□ 1.82
FAAP20-205ENST00000401813 ABCA5Q8WWZ7 1642 aa26.41■■□□□ 1.82
FAAP20-205ENST00000401813 PPP4R2Q9NY27 417 aa26.4■■□□□ 1.82
FAAP20-205ENST00000401813 UGGT2Q9NYU1 1516 aa26.4■■□□□ 1.82
FAAP20-205ENST00000401813 HECW1Q76N89 1606 aa26.39■■□□□ 1.82
FAAP20-205ENST00000401813 GCC2Q8IWJ2 1684 aa26.38■■□□□ 1.81
FAAP20-205ENST00000401813 ARHGEF11O15085 1522 aa26.37■■□□□ 1.81
FAAP20-205ENST00000401813 TDRD9Q8NDG6 1382 aaKnown RBP26.36■■□□□ 1.81
FAAP20-205ENST00000401813 ERICH6Q7L0X2 663 aa26.36■■□□□ 1.81
FAAP20-205ENST00000401813 CHIC2Q9UKJ5 165 aa26.36■■□□□ 1.81
FAAP20-205ENST00000401813 GAPVD1Q14C86 1478 aa26.34■■□□□ 1.81
FAAP20-205ENST00000401813 MAGI3Q5TCQ9 1506 aa26.34■■□□□ 1.81
FAAP20-205ENST00000401813 TCOF1Q13428 1488 aaKnown RBP26.33■■□□□ 1.81
FAAP20-205ENST00000401813 KDM6BO15054 1643 aa26.32■■□□□ 1.8
FAAP20-205ENST00000401813 C11orf95C9JLR9 678 aaPredicted RBP26.31■■□□□ 1.8
FAAP20-205ENST00000401813 PRKRIP1Q9H875 184 aaPredicted RBP26.31■■□□□ 1.8
FAAP20-205ENST00000401813 NCOA1Q15788 1441 aa26.3■■□□□ 1.8
FAAP20-205ENST00000401813 CCDC7Q96M83 1385 aa26.3■■□□□ 1.8
FAAP20-205ENST00000401813 FAM9BQ8IZU0 186 aa26.29■■□□□ 1.8
FAAP20-205ENST00000401813 L3MBTL2Q969R5 705 aa26.29■■□□□ 1.8
FAAP20-205ENST00000401813 AKNAQ7Z591 1439 aa26.28■■□□□ 1.8
FAAP20-205ENST00000401813 MPHOSPH9Q99550 1183 aa26.28■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms