RNA–Protein interactions for RNA: ENST00000401642.7

SCFD2-202, Transcript of sec1 family domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD2, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-202ENST00000401642 FHOD3Q2V2M9 1422 aa16.08■□□□□ 0.16
SCFD2-202ENST00000401642 FANCD2Q9BXW9 1451 aa16.07■□□□□ 0.16
SCFD2-202ENST00000401642 TDRD9Q8NDG6 1382 aaKnown RBP16.06■□□□□ 0.16
SCFD2-202ENST00000401642 RAB3GAP2Q9H2M9 1393 aa16.06■□□□□ 0.16
SCFD2-202ENST00000401642 CC2D2AQ9P2K1 1620 aa16.06■□□□□ 0.16
SCFD2-202ENST00000401642 PHLDB1Q86UU1 1377 aa16.03■□□□□ 0.16
SCFD2-202ENST00000401642 KCNH8Q96L42 1107 aa16.03■□□□□ 0.16
SCFD2-202ENST00000401642 RRBP1Q9P2E9 1410 aaKnown RBP16■□□□□ 0.15
SCFD2-202ENST00000401642 DDX10Q13206 875 aaKnown RBP15.99■□□□□ 0.15
SCFD2-202ENST00000401642 CHIC2Q9UKJ5 165 aa15.97■□□□□ 0.15
SCFD2-202ENST00000401642 CLSPNQ9HAW4 1339 aa15.93■□□□□ 0.14
SCFD2-202ENST00000401642 POLA1P09884 1462 aaPredicted RBP15.93■□□□□ 0.14
SCFD2-202ENST00000401642 LRRC9Q6ZRR7 1453 aa15.92■□□□□ 0.14
SCFD2-202ENST00000401642 SETD5Q9C0A6 1442 aa15.91■□□□□ 0.14
SCFD2-202ENST00000401642 MTUS2Q5JR59 1369 aa15.91■□□□□ 0.14
SCFD2-202ENST00000401642 RRP7BPQ9NSQ0 103 aa15.89■□□□□ 0.13
SCFD2-202ENST00000401642 TOPBP1Q92547 1522 aa15.89■□□□□ 0.13
SCFD2-202ENST00000401642 TIAM1Q13009 1591 aa15.89■□□□□ 0.13
SCFD2-202ENST00000401642 FHAD1B1AJZ9 1412 aa15.88■□□□□ 0.13
SCFD2-202ENST00000401642 BCANQ96GW7 911 aa15.87■□□□□ 0.13
SCFD2-202ENST00000401642 TRIM52Q96A61 297 aa15.86■□□□□ 0.13
SCFD2-202ENST00000401642 PCF11O94913 1555 aaKnown RBP15.85■□□□□ 0.13
SCFD2-202ENST00000401642 BCL11AQ9H165 835 aa15.83■□□□□ 0.12
SCFD2-202ENST00000401642 CNGB1Q14028 1251 aaPredicted RBP15.82■□□□□ 0.12
SCFD2-202ENST00000401642 FBLN2P98095 1184 aa15.8■□□□□ 0.12
SCFD2-202ENST00000401642 URB2Q14146 1524 aaKnown RBP15.79■□□□□ 0.12
SCFD2-202ENST00000401642 DNMBPQ6XZF7 1577 aa15.79■□□□□ 0.12
SCFD2-202ENST00000401642 FOXD1Q16676 465 aa15.79■□□□□ 0.12
SCFD2-202ENST00000401642 MAPKBP1O60336 1514 aa15.78■□□□□ 0.12
SCFD2-202ENST00000401642 ABCA10Q8WWZ4 1543 aa15.78■□□□□ 0.12
SCFD2-202ENST00000401642 TONSLQ96HA7 1378 aa15.76■□□□□ 0.11
SCFD2-202ENST00000401642 WDR97A6NE52 1622 aa15.75■□□□□ 0.11
SCFD2-202ENST00000401642 GAPVD1Q14C86 1478 aa15.75■□□□□ 0.11
SCFD2-202ENST00000401642 AQRO60306 1485 aaKnown RBP eCLIP15.75■□□□□ 0.11
SCFD2-202ENST00000401642 PRDM2Q13029 1718 aa15.74■□□□□ 0.11
SCFD2-202ENST00000401642 PPP1R15AO75807 674 aaPredicted RBP15.73■□□□□ 0.11
SCFD2-202ENST00000401642 PRKCSHP14314 528 aaPredicted RBP15.73■□□□□ 0.11
SCFD2-202ENST00000401642 SUPT16HQ9Y5B9 1047 aaKnown RBP15.73■□□□□ 0.11
SCFD2-202ENST00000401642 CASKIN1Q8WXD9 1431 aa15.73■□□□□ 0.11
SCFD2-202ENST00000401642 FMN1Q68DA7 1419 aa15.72■□□□□ 0.11
SCFD2-202ENST00000401642 FGD6Q6ZV73 1430 aa15.71■□□□□ 0.11
SCFD2-202ENST00000401642 PDS5BQ9NTI5 1447 aa15.71■□□□□ 0.11
SCFD2-202ENST00000401642 PTPRKQ15262 1439 aa15.71■□□□□ 0.1
SCFD2-202ENST00000401642 ZNF777Q9ULD5 760 aaPredicted RBP15.69■□□□□ 0.1
SCFD2-202ENST00000401642 ANP32CO43423 234 aa15.69■□□□□ 0.1
SCFD2-202ENST00000401642 FYCO1Q9BQS8 1478 aa15.68■□□□□ 0.1
SCFD2-202ENST00000401642 POLR3GLQ9BT43 218 aa15.66■□□□□ 0.1
SCFD2-202ENST00000401642 FKBP8Q14318 412 aa15.66■□□□□ 0.1
SCFD2-202ENST00000401642 CCDC18Q5T9S5 1454 aa15.65■□□□□ 0.1
SCFD2-202ENST00000401642 NCOA2Q15596 1464 aa15.64■□□□□ 0.1
SCFD2-202ENST00000401642 ZNF644Q9H582 1327 aaPredicted RBP15.64■□□□□ 0.09
SCFD2-202ENST00000401642 MAP3K1Q13233 1512 aa15.64■□□□□ 0.09
SCFD2-202ENST00000401642 ZNF326Q5BKZ1 582 aaKnown RBP15.63■□□□□ 0.09
SCFD2-202ENST00000401642 SENP3-EIF4A1A0A087X0R7 540 aa15.61■□□□□ 0.09
SCFD2-202ENST00000401642 EFCAB5A4FU69 1503 aa15.6■□□□□ 0.09
SCFD2-202ENST00000401642 SNAPC4Q5SXM2 1469 aa15.6■□□□□ 0.09
SCFD2-202ENST00000401642 MYOM3Q5VTT5 1437 aa15.59■□□□□ 0.09
SCFD2-202ENST00000401642 CFAP43Q8NDM7 1665 aa15.58■□□□□ 0.09
SCFD2-202ENST00000401642 IRX6P78412 446 aaPredicted RBP15.58■□□□□ 0.08
SCFD2-202ENST00000401642 CUL7Q14999 1698 aa15.57■□□□□ 0.08
SCFD2-202ENST00000401642 CDK13Q14004 1512 aaKnown RBP15.57■□□□□ 0.08
SCFD2-202ENST00000401642 LAMC3Q9Y6N6 1575 aa15.57■□□□□ 0.08
SCFD2-202ENST00000401642 CHMP7Q8WUX9 453 aaPredicted RBP15.56■□□□□ 0.08
SCFD2-202ENST00000401642 NAIPQ13075 1403 aa15.56■□□□□ 0.08
SCFD2-202ENST00000401642 KIF21AQ7Z4S6 1674 aa15.55■□□□□ 0.08
SCFD2-202ENST00000401642 CTTNBP2Q8WZ74 1663 aa15.55■□□□□ 0.08
SCFD2-202ENST00000401642 HSPA5P11021 654 aaKnown RBP15.55■□□□□ 0.08
SCFD2-202ENST00000401642 MPHOSPH9Q99550 1183 aa15.55■□□□□ 0.08
SCFD2-202ENST00000401642 ZNF608Q9ULD9 1512 aaPredicted RBP15.54■□□□□ 0.08
SCFD2-202ENST00000401642 HNRNPUQ00839 825 aaKnown RBP eCLIP15.54■□□□□ 0.08
SCFD2-202ENST00000401642 NEFLP07196 543 aa15.53■□□□□ 0.08
SCFD2-202ENST00000401642 L3MBTL2Q969R5 705 aa15.53■□□□□ 0.08
SCFD2-202ENST00000401642 SLC4A1APQ9BWU0 796 aaKnown RBP15.53■□□□□ 0.08
SCFD2-202ENST00000401642 HFM1A2PYH4 1435 aa15.52■□□□□ 0.08
SCFD2-202ENST00000401642 UACAQ9BZF9 1416 aa15.52■□□□□ 0.07
SCFD2-202ENST00000401642 MAGI3Q5TCQ9 1506 aa15.51■□□□□ 0.07
SCFD2-202ENST00000401642 GRIN2BQ13224 1484 aa15.51■□□□□ 0.07
SCFD2-202ENST00000401642 TIMELESSQ9UNS1 1208 aa15.51■□□□□ 0.07
SCFD2-202ENST00000401642 ABCA5Q8WWZ7 1642 aa15.49■□□□□ 0.07
SCFD2-202ENST00000401642 FAM9BQ8IZU0 186 aa15.48■□□□□ 0.07
SCFD2-202ENST00000401642 CFDP1Q9UEE9 299 aaPredicted RBP15.47■□□□□ 0.07
SCFD2-202ENST00000401642 EIF4G2P78344 907 aaKnown RBP eCLIP15.47■□□□□ 0.076e-6■■■■□ 25.1
SCFD2-202ENST00000401642 PTPN23Q9H3S7 1636 aa15.47■□□□□ 0.07
SCFD2-202ENST00000401642 EPRSP07814 1512 aaKnown RBP15.46■□□□□ 0.07
SCFD2-202ENST00000401642 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.45■□□□□ 0.06
SCFD2-202ENST00000401642 LRRIQ1Q96JM4 1722 aa15.45■□□□□ 0.06
SCFD2-202ENST00000401642 WASHC2AQ641Q2 1341 aa15.45■□□□□ 0.06
SCFD2-202ENST00000401642 CCDC184Q52MB2 194 aa15.45■□□□□ 0.06
SCFD2-202ENST00000401642 C11orf95C9JLR9 678 aaPredicted RBP15.44■□□□□ 0.06
SCFD2-202ENST00000401642 CDK11AQ9UQ88 783 aaPredicted RBP15.44■□□□□ 0.06
SCFD2-202ENST00000401642 ERCC6Q03468 1493 aa15.44■□□□□ 0.06
SCFD2-202ENST00000401642 TSHZ2Q9NRE2 1034 aa15.44■□□□□ 0.06
SCFD2-202ENST00000401642 SUPT6HQ7KZ85 1726 aaKnown RBP15.43■□□□□ 0.06
SCFD2-202ENST00000401642 SAMD9Q5K651 1589 aa15.43■□□□□ 0.06
SCFD2-202ENST00000401642 THOC2Q8NI27 1593 aaKnown RBP15.43■□□□□ 0.06
SCFD2-202ENST00000401642 EHBP1L1Q8N3D4 1523 aa15.42■□□□□ 0.06
SCFD2-202ENST00000401642 NBPF8Q3BBV2 869 aa15.42■□□□□ 0.06
SCFD2-202ENST00000401642 KDM2AQ9Y2K7 1162 aa15.42■□□□□ 0.06
SCFD2-202ENST00000401642 IQGAP2Q13576 1575 aa15.41■□□□□ 0.06
SCFD2-202ENST00000401642 TARBP1Q13395 1621 aaKnown RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms