RNA–Protein interactions for RNA: ENST00000400227.7

CSNK2A1-204, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CSNK2A1, Length 1,499 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-204ENST00000400227 PKD2Q13563 968 aa14.06□□□□□ -0.16
CSNK2A1-204ENST00000400227 TSPYL2Q9H2G4 693 aaPredicted RBP14.06□□□□□ -0.16
CSNK2A1-204ENST00000400227 PAK3O75914 559 aaPredicted RBP14.06□□□□□ -0.16
CSNK2A1-204ENST00000400227 HAX1O00165 279 aa14.02□□□□□ -0.16
CSNK2A1-204ENST00000400227 TRIM41Q8WV44 630 aa13.99□□□□□ -0.17
CSNK2A1-204ENST00000400227 ZRANB1Q9UGI0 708 aa13.99□□□□□ -0.17
CSNK2A1-204ENST00000400227 CCDC61Q9Y6R9 512 aa13.99□□□□□ -0.17
CSNK2A1-204ENST00000400227 ECM2O94769 699 aaPredicted RBP13.96□□□□□ -0.17
CSNK2A1-204ENST00000400227 CHRM1P11229 460 aaPredicted RBP13.93□□□□□ -0.18
CSNK2A1-204ENST00000400227 PYGBP11216 843 aa13.91□□□□□ -0.18
CSNK2A1-204ENST00000400227 EVX2Q03828 476 aa13.91□□□□□ -0.18
CSNK2A1-204ENST00000400227 ZNF579Q8NAF0 562 aaKnown RBP13.9□□□□□ -0.18
CSNK2A1-204ENST00000400227 PHF12Q96QT6 1004 aa13.87□□□□□ -0.19
CSNK2A1-204ENST00000400227 KIF12Q96FN5 646 aa13.84□□□□□ -0.19
CSNK2A1-204ENST00000400227 RGL2O15211 777 aa13.82□□□□□ -0.2
CSNK2A1-204ENST00000400227 MAP3K13O43283 966 aa13.8□□□□□ -0.2
CSNK2A1-204ENST00000400227 RNF25Q96BH1 459 aaPredicted RBP13.8□□□□□ -0.2
CSNK2A1-204ENST00000400227 SGIP1Q9BQI5 828 aa13.79□□□□□ -0.2
CSNK2A1-204ENST00000400227 PCDHB13Q9Y5F0 798 aa13.77□□□□□ -0.21
CSNK2A1-204ENST00000400227 RIOK3O14730 519 aaKnown RBP13.75□□□□□ -0.21
CSNK2A1-204ENST00000400227 CLCN6P51797 869 aa13.75□□□□□ -0.21
CSNK2A1-204ENST00000400227 ZNF467Q7Z7K2 595 aaPredicted RBP13.74□□□□□ -0.21
CSNK2A1-204ENST00000400227 IFNL1Q8IU54 200 aa13.72□□□□□ -0.21
CSNK2A1-204ENST00000400227 PCDHB8Q9UN66 801 aa13.72□□□□□ -0.21
CSNK2A1-204ENST00000400227 MS4A3Q96HJ5 214 aa13.7□□□□□ -0.22
CSNK2A1-204ENST00000400227 DCAF8L2P0C7V8 631 aa13.68□□□□□ -0.22
CSNK2A1-204ENST00000400227 TAOK2Q9UL54 1235 aa13.67□□□□□ -0.22
CSNK2A1-204ENST00000400227 VGFO15240 615 aaPredicted RBP13.67□□□□□ -0.22
CSNK2A1-204ENST00000400227 GALR2O43603 387 aaPredicted RBP13.66□□□□□ -0.22
CSNK2A1-204ENST00000400227 GABBR2O75899 941 aa13.65□□□□□ -0.22
CSNK2A1-204ENST00000400227 PDAP1Q13442 181 aaKnown RBP13.62□□□□□ -0.23
CSNK2A1-204ENST00000400227 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.59□□□□□ -0.23
CSNK2A1-204ENST00000400227 PSEN1P49768 467 aa13.59□□□□□ -0.23
CSNK2A1-204ENST00000400227 ZFP91Q96JP5 570 aaPredicted RBP13.59□□□□□ -0.23
CSNK2A1-204ENST00000400227 TRPC6Q9Y210 931 aa13.59□□□□□ -0.23
CSNK2A1-204ENST00000400227 CHGAP10645 457 aaKnown RBP13.55□□□□□ -0.24
CSNK2A1-204ENST00000400227 TIE1P35590 1138 aa13.55□□□□□ -0.24
CSNK2A1-204ENST00000400227 HS6ST3Q8IZP7 471 aa13.55□□□□□ -0.24
CSNK2A1-204ENST00000400227 STK25O00506 426 aa13.54□□□□□ -0.24
CSNK2A1-204ENST00000400227 TMEM106CQ9BVX2 250 aa13.51□□□□□ -0.25
CSNK2A1-204ENST00000400227 BCL11BQ9C0K0 894 aaPredicted RBP13.51□□□□□ -0.25
CSNK2A1-204ENST00000400227 BMP2KQ9NSY1 1161 aaPredicted RBP13.5□□□□□ -0.25
CSNK2A1-204ENST00000400227 STK24Q9Y6E0 443 aa13.49□□□□□ -0.25
CSNK2A1-204ENST00000400227 TTLL13PA6NNM8 815 aa13.48□□□□□ -0.25
CSNK2A1-204ENST00000400227 ASTLQ6HA08 431 aaPredicted RBP13.45□□□□□ -0.26
CSNK2A1-204ENST00000400227 DCBLD2Q96PD2 775 aa13.45□□□□□ -0.26
CSNK2A1-204ENST00000400227 DNAJC5Q9H3Z4 198 aa13.44□□□□□ -0.26
CSNK2A1-204ENST00000400227 ATMINO43313 823 aaPredicted RBP13.43□□□□□ -0.26
CSNK2A1-204ENST00000400227 CABP2Q9NPB3 220 aa13.42□□□□□ -0.26
CSNK2A1-204ENST00000400227 ATN1P54259 1190 aaPredicted RBP13.41□□□□□ -0.26
CSNK2A1-204ENST00000400227 BBXQ8WY36 941 aaPredicted RBP13.41□□□□□ -0.26
CSNK2A1-204ENST00000400227 TRIM35Q9UPQ4 493 aa13.39□□□□□ -0.27
CSNK2A1-204ENST00000400227 POTEIP0CG38 1075 aa13.37□□□□□ -0.27
CSNK2A1-204ENST00000400227 GOLGA2Q08379 1002 aa13.37□□□□□ -0.27
CSNK2A1-204ENST00000400227 EFCAB3Q8N7B9 438 aa13.36□□□□□ -0.27
CSNK2A1-204ENST00000400227 NKX1-1Q15270 411 aaPredicted RBP13.35□□□□□ -0.27
CSNK2A1-204ENST00000400227 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.33□□□□□ -0.28
CSNK2A1-204ENST00000400227 MKRN3Q13064 507 aaKnown RBP13.32□□□□□ -0.28
CSNK2A1-204ENST00000400227 PELP1Q8IZL8 1130 aaKnown RBP13.32□□□□□ -0.28
CSNK2A1-204ENST00000400227 PLSCR2Q9NRY7 297 aa13.32□□□□□ -0.28
CSNK2A1-204ENST00000400227 SOX12O15370 315 aa13.3□□□□□ -0.28
CSNK2A1-204ENST00000400227 IER5LQ5T953 404 aa13.28□□□□□ -0.28
CSNK2A1-204ENST00000400227 MFRPQ9BY79 579 aa13.27□□□□□ -0.29
CSNK2A1-204ENST00000400227 LHX8Q68G74 356 aa13.25□□□□□ -0.29
CSNK2A1-204ENST00000400227 SLC39A7Q92504 469 aa13.25□□□□□ -0.29
CSNK2A1-204ENST00000400227 PHF8Q9UPP1 1060 aa13.24□□□□□ -0.29
CSNK2A1-204ENST00000400227 NLRP6P59044 892 aa13.23□□□□□ -0.29
CSNK2A1-204ENST00000400227 GTPBP6O43824 516 aaPredicted RBP13.23□□□□□ -0.29
CSNK2A1-204ENST00000400227 ILDR1Q86SU0 546 aaPredicted RBP13.23□□□□□ -0.29
CSNK2A1-204ENST00000400227 FBXO22Q8NEZ5 403 aa13.23□□□□□ -0.29
CSNK2A1-204ENST00000400227 RYDENQ9NUL5 291 aaKnown RBP13.23□□□□□ -0.29
CSNK2A1-204ENST00000400227 C7P10643 843 aa13.22□□□□□ -0.29
CSNK2A1-204ENST00000400227 IRX5P78411 483 aaPredicted RBP13.22□□□□□ -0.29
CSNK2A1-204ENST00000400227 SPRYD3Q8NCJ5 442 aa13.22□□□□□ -0.29
CSNK2A1-204ENST00000400227 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.22□□□□□ -0.293e-7■□□□□ 8.4
CSNK2A1-204ENST00000400227 PAXIP1Q6ZW49 1069 aaPredicted RBP13.21□□□□□ -0.3
CSNK2A1-204ENST00000400227 PLCB2Q00722 1185 aa13.19□□□□□ -0.3
CSNK2A1-204ENST00000400227 METRNQ9UJH8 293 aa13.19□□□□□ -0.3
CSNK2A1-204ENST00000400227 CFAP44Q96MT7 982 aa13.18□□□□□ -0.3
CSNK2A1-204ENST00000400227 OCEL1Q9H607 264 aa13.18□□□□□ -0.3
CSNK2A1-204ENST00000400227 MS4A4AQ96JQ5 239 aa13.17□□□□□ -0.3
CSNK2A1-204ENST00000400227 SEC24BO95487 1268 aa13.16□□□□□ -0.3
CSNK2A1-204ENST00000400227 PDCD7Q8N8D1 485 aaKnown RBP13.16□□□□□ -0.3
CSNK2A1-204ENST00000400227 PLCG2P16885 1265 aa13.15□□□□□ -0.3
CSNK2A1-204ENST00000400227 COLQQ9Y215 455 aaPredicted RBP13.15□□□□□ -0.3
CSNK2A1-204ENST00000400227 POTEFA5A3E0 1075 aa13.13□□□□□ -0.31
CSNK2A1-204ENST00000400227 DPY19L2Q6NUT2 758 aa13.09□□□□□ -0.31
CSNK2A1-204ENST00000400227 PPP1R37O75864 691 aa13.08□□□□□ -0.32
CSNK2A1-204ENST00000400227 L3MBTL3Q96JM7 780 aaPredicted RBP13.01□□□□□ -0.33
CSNK2A1-204ENST00000400227 BOLA1Q9Y3E2 137 aa12.99□□□□□ -0.33
CSNK2A1-204ENST00000400227 HAP1P54257 671 aaPredicted RBP12.97□□□□□ -0.33
CSNK2A1-204ENST00000400227 MICALL2Q8IY33 904 aa12.97□□□□□ -0.33
CSNK2A1-204ENST00000400227 TMEM121BQ9BXQ6 578 aaPredicted RBP12.97□□□□□ -0.33
CSNK2A1-204ENST00000400227 G3V3G9 751 aa12.96□□□□□ -0.34
CSNK2A1-204ENST00000400227 TSHZ2Q9NRE2 1034 aa12.96□□□□□ -0.34
CSNK2A1-204ENST00000400227 POTEB2H3BUK9 544 aa12.95□□□□□ -0.34
CSNK2A1-204ENST00000400227 POTEJP0CG39 1038 aa12.91□□□□□ -0.34
CSNK2A1-204ENST00000400227 CADPS2Q86UW7 1296 aa12.89□□□□□ -0.35
CSNK2A1-204ENST00000400227 SLC24A1O60721 1099 aa12.87□□□□□ -0.35
CSNK2A1-204ENST00000400227 C3orf67Q6ZVT6 689 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms