RNA–Protein interactions for RNA: ENST00000399878.7

SEL1L3-202, Transcript of SEL1L family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEL1L3, Length 4,520 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEL1L3-202ENST00000399878 CHGAP10645 457 aaKnown RBP25.22■■□□□ 1.63
SEL1L3-202ENST00000399878 KDM2AQ9Y2K7 1162 aa25.22■■□□□ 1.63
SEL1L3-202ENST00000399878 SIN3AQ96ST3 1273 aa25.21■■□□□ 1.63
SEL1L3-202ENST00000399878 VPS8Q8N3P4 1428 aa25.21■■□□□ 1.63
SEL1L3-202ENST00000399878 CFDP1Q9UEE9 299 aaPredicted RBP25.19■■□□□ 1.62
SEL1L3-202ENST00000399878 SENP3Q9H4L4 574 aaPredicted RBP25.16■■□□□ 1.62
SEL1L3-202ENST00000399878 MIER1Q8N108 512 aa25.13■■□□□ 1.61
SEL1L3-202ENST00000399878 FANCD2Q9BXW9 1451 aa25.12■■□□□ 1.61
SEL1L3-202ENST00000399878 ERICH6Q7L0X2 663 aa25.12■■□□□ 1.61
SEL1L3-202ENST00000399878 DNAJC5BQ9UF47 199 aa25.12■■□□□ 1.61
SEL1L3-202ENST00000399878 CCNB3Q8WWL7 1395 aa25.1■■□□□ 1.61
SEL1L3-202ENST00000399878 NCAPD3P42695 1498 aa25.07■■□□□ 1.6
SEL1L3-202ENST00000399878 ACIN1Q9UKV3 1341 aaKnown RBP25.05■■□□□ 1.6
SEL1L3-202ENST00000399878 FHAD1B1AJZ9 1412 aa25.04■■□□□ 1.6
SEL1L3-202ENST00000399878 FHOD3Q2V2M9 1422 aa25.04■■□□□ 1.6
SEL1L3-202ENST00000399878 RGL3Q3MIN7 710 aa25.02■■□□□ 1.6
SEL1L3-202ENST00000399878 RAD54L2Q9Y4B4 1467 aa25■■□□□ 1.59
SEL1L3-202ENST00000399878 ESF1Q9H501 851 aaKnown RBP24.96■■□□□ 1.59
SEL1L3-202ENST00000399878 BICRAQ9NZM4 1560 aa24.96■■□□□ 1.59
SEL1L3-202ENST00000399878 NESP48681 1621 aa24.94■■□□□ 1.58
SEL1L3-202ENST00000399878 IGF1RP08069 1367 aa24.94■■□□□ 1.58
SEL1L3-202ENST00000399878 FGD5Q6ZNL6 1462 aa24.93■■□□□ 1.58
SEL1L3-202ENST00000399878 FAM9BQ8IZU0 186 aa24.92■■□□□ 1.58
SEL1L3-202ENST00000399878 FOXD1Q16676 465 aa24.9■■□□□ 1.58
SEL1L3-202ENST00000399878 SALL2Q9Y467 1007 aaPredicted RBP24.89■■□□□ 1.57
SEL1L3-202ENST00000399878 SENP3-EIF4A1A0A087X0R7 540 aa24.88■■□□□ 1.57
SEL1L3-202ENST00000399878 STAG3Q9UJ98 1225 aa24.87■■□□□ 1.57
SEL1L3-202ENST00000399878 HNRNPUQ00839 825 aaKnown RBP eCLIP24.84■■□□□ 1.57
SEL1L3-202ENST00000399878 SYNJ1O43426 1573 aa24.82■■□□□ 1.56
SEL1L3-202ENST00000399878 JPH4Q96JJ6 628 aa24.82■■□□□ 1.56
SEL1L3-202ENST00000399878 EIF4G2P78344 907 aaKnown RBP eCLIP24.8■■□□□ 1.56
SEL1L3-202ENST00000399878 CFTRP13569 1480 aa24.76■■□□□ 1.55
SEL1L3-202ENST00000399878 FMN1Q68DA7 1419 aa24.75■■□□□ 1.55
SEL1L3-202ENST00000399878 ARHGAP35Q9NRY4 1499 aa24.75■■□□□ 1.55
SEL1L3-202ENST00000399878 RAB3GAP2Q9H2M9 1393 aa24.74■■□□□ 1.55
SEL1L3-202ENST00000399878 AQRO60306 1485 aaKnown RBP eCLIP24.74■■□□□ 1.557e-7■■■■□ 22
SEL1L3-202ENST00000399878 CC2D2AQ9P2K1 1620 aa24.74■■□□□ 1.55
SEL1L3-202ENST00000399878 SETD5Q9C0A6 1442 aa24.69■■□□□ 1.54
SEL1L3-202ENST00000399878 MRS2Q9HD23 443 aa24.68■■□□□ 1.54
SEL1L3-202ENST00000399878 GAPVD1Q14C86 1478 aa24.68■■□□□ 1.54
SEL1L3-202ENST00000399878 CARMIL2Q6F5E8 1435 aa24.66■■□□□ 1.54
SEL1L3-202ENST00000399878 TRHP20396 242 aaPredicted RBP24.66■■□□□ 1.54
SEL1L3-202ENST00000399878 FKBP8Q14318 412 aa24.65■■□□□ 1.54
SEL1L3-202ENST00000399878 TMC1Q8TDI8 760 aa24.63■■□□□ 1.53
SEL1L3-202ENST00000399878 HNRNPMP52272 730 aaKnown RBP eCLIP24.61■■□□□ 1.53
SEL1L3-202ENST00000399878 SCAF1Q9H7N4 1312 aaKnown RBP24.6■■□□□ 1.53
SEL1L3-202ENST00000399878 BCL11AQ9H165 835 aa24.6■■□□□ 1.53
SEL1L3-202ENST00000399878 CARD11Q9BXL7 1154 aa24.59■■□□□ 1.53
SEL1L3-202ENST00000399878 CUX1P39880 1505 aa24.58■■□□□ 1.53
SEL1L3-202ENST00000399878 CLSPNQ9HAW4 1339 aa24.58■■□□□ 1.52
SEL1L3-202ENST00000399878 PKD2Q13563 968 aa24.57■■□□□ 1.52
SEL1L3-202ENST00000399878 ARID4BQ4LE39 1312 aaPredicted RBP24.57■■□□□ 1.52
SEL1L3-202ENST00000399878 IRX6P78412 446 aaPredicted RBP24.56■■□□□ 1.52
SEL1L3-202ENST00000399878 DCAF11Q8TEB1 546 aa24.56■■□□□ 1.52
SEL1L3-202ENST00000399878 UNC13AQ9UPW8 1703 aa24.55■■□□□ 1.52
SEL1L3-202ENST00000399878 MPHOSPH9Q99550 1183 aa24.53■■□□□ 1.52
SEL1L3-202ENST00000399878 SLC24A1O60721 1099 aa24.52■■□□□ 1.52
SEL1L3-202ENST00000399878 KIF21BO75037 1637 aa24.52■■□□□ 1.52
SEL1L3-202ENST00000399878 HMGXB3Q12766 1538 aa24.51■■□□□ 1.51
SEL1L3-202ENST00000399878 ARAP1Q96P48 1450 aa24.5■■□□□ 1.51
SEL1L3-202ENST00000399878 MLECQ14165 292 aa24.47■■□□□ 1.51
SEL1L3-202ENST00000399878 GGT6Q6P531 493 aa24.47■■□□□ 1.51
SEL1L3-202ENST00000399878 ZNF644Q9H582 1327 aaPredicted RBP24.47■■□□□ 1.51
SEL1L3-202ENST00000399878 POLA1P09884 1462 aaPredicted RBP24.45■■□□□ 1.5
SEL1L3-202ENST00000399878 DAXXQ9UER7 740 aaPredicted RBP24.44■■□□□ 1.5
SEL1L3-202ENST00000399878 TOPBP1Q92547 1522 aa24.44■■□□□ 1.5
SEL1L3-202ENST00000399878 NUP155O75694 1391 aa24.42■■□□□ 1.5
SEL1L3-202ENST00000399878 CANXP27824 592 aaKnown RBP24.42■■□□□ 1.5
SEL1L3-202ENST00000399878 DHX57Q6P158 1386 aaKnown RBP24.41■■□□□ 1.5
SEL1L3-202ENST00000399878 PLEKHG5O94827 1062 aa24.41■■□□□ 1.5
SEL1L3-202ENST00000399878 PHLDB1Q86UU1 1377 aa24.41■■□□□ 1.5
SEL1L3-202ENST00000399878 PRXQ9BXM0 1461 aa24.41■■□□□ 1.5
SEL1L3-202ENST00000399878 TOP2BQ02880 1626 aa24.41■■□□□ 1.5
SEL1L3-202ENST00000399878 CYB5RLQ6IPT4 315 aa24.4■■□□□ 1.5
SEL1L3-202ENST00000399878 EFCAB2Q5VUJ9 269 aa24.39■■□□□ 1.5
SEL1L3-202ENST00000399878 HSPA5P11021 654 aaKnown RBP24.38■■□□□ 1.49
SEL1L3-202ENST00000399878 PTPRGP23470 1445 aa24.38■■□□□ 1.49
SEL1L3-202ENST00000399878 L3MBTL2Q969R5 705 aa24.38■■□□□ 1.49
SEL1L3-202ENST00000399878 PPP1R15AO75807 674 aaPredicted RBP24.37■■□□□ 1.49
SEL1L3-202ENST00000399878 NEFMP07197 916 aa24.33■■□□□ 1.49
SEL1L3-202ENST00000399878 CCDC18Q5T9S5 1454 aa24.31■■□□□ 1.48
SEL1L3-202ENST00000399878 KIF3BO15066 747 aa24.3■■□□□ 1.48
SEL1L3-202ENST00000399878 WDR43Q15061 677 aaKnown RBP eCLIP24.29■■□□□ 1.48
SEL1L3-202ENST00000399878 ANKRD30AQ9BXX3 1397 aa24.28■■□□□ 1.48
SEL1L3-202ENST00000399878 TIMELESSQ9UNS1 1208 aa24.27■■□□□ 1.48
SEL1L3-202ENST00000399878 SAFB2Q14151 953 aaKnown RBP eCLIP24.27■■□□□ 1.48
SEL1L3-202ENST00000399878 OSCARQ8IYS5 282 aa24.26■■□□□ 1.47
SEL1L3-202ENST00000399878 CC2D1BQ5T0F9 858 aaKnown RBP24.25■■□□□ 1.47
SEL1L3-202ENST00000399878 TNNT2P45379 298 aaPredicted RBP24.25■■□□□ 1.47
SEL1L3-202ENST00000399878 GRIN2BQ13224 1484 aa24.23■■□□□ 1.47
SEL1L3-202ENST00000399878 LRRC9Q6ZRR7 1453 aa24.21■■□□□ 1.47
SEL1L3-202ENST00000399878 ERICH3Q5RHP9 1530 aa24.21■■□□□ 1.47
SEL1L3-202ENST00000399878 KNSTRNQ9Y448 316 aa24.2■■□□□ 1.46
SEL1L3-202ENST00000399878 PEG3Q9GZU2 1588 aa24.19■■□□□ 1.46
SEL1L3-202ENST00000399878 SPAG9O60271 1321 aaKnown RBP24.19■■□□□ 1.46
SEL1L3-202ENST00000399878 MRC2Q9UBG0 1479 aa24.19■■□□□ 1.46
SEL1L3-202ENST00000399878 NUTM2DQ5VT03 806 aaPredicted RBP24.18■■□□□ 1.46
SEL1L3-202ENST00000399878 SUPT16HQ9Y5B9 1047 aaKnown RBP24.17■■□□□ 1.46
SEL1L3-202ENST00000399878 FGD6Q6ZV73 1430 aa24.17■■□□□ 1.46
SEL1L3-202ENST00000399878 PPM1GO15355 546 aaPredicted RBP24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms