RNA–Protein interactions for RNA: ENST00000399380.7

CDH2-202, Transcript of cadherin 2, humanhuman

TSL 2 BASIC

Gene CDH2, Length 3,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH2-202ENST00000399380 ERICH6Q7L0X2 663 aa10.62□□□□□ -0.71
CDH2-202ENST00000399380 SIN3AQ96ST3 1273 aa10.62□□□□□ -0.71
CDH2-202ENST00000399380 FHAD1B1AJZ9 1412 aa10.62□□□□□ -0.71
CDH2-202ENST00000399380 MAP3K1Q13233 1512 aa10.61□□□□□ -0.71
CDH2-202ENST00000399380 TRIM52Q96A61 297 aa10.61□□□□□ -0.71
CDH2-202ENST00000399380 RBM19Q9Y4C8 960 aaKnown RBP10.61□□□□□ -0.71
CDH2-202ENST00000399380 TONSLQ96HA7 1378 aa10.6□□□□□ -0.71
CDH2-202ENST00000399380 PPP1R15AO75807 674 aaPredicted RBP10.6□□□□□ -0.71
CDH2-202ENST00000399380 CUX1P39880 1505 aa10.59□□□□□ -0.71
CDH2-202ENST00000399380 CDK11AQ9UQ88 783 aaPredicted RBP10.59□□□□□ -0.71
CDH2-202ENST00000399380 MAPKBP1O60336 1514 aa10.58□□□□□ -0.72
CDH2-202ENST00000399380 CARMIL1Q5VZK9 1371 aa10.58□□□□□ -0.72
CDH2-202ENST00000399380 LRRC9Q6ZRR7 1453 aa10.57□□□□□ -0.72
CDH2-202ENST00000399380 TIAM1Q13009 1591 aa10.57□□□□□ -0.72
CDH2-202ENST00000399380 NCAPD3P42695 1498 aa10.56□□□□□ -0.72
CDH2-202ENST00000399380 IGF1RP08069 1367 aa10.56□□□□□ -0.72
CDH2-202ENST00000399380 BCL11AQ9H165 835 aa10.56□□□□□ -0.72
CDH2-202ENST00000399380 WDR97A6NE52 1622 aa10.55□□□□□ -0.72
CDH2-202ENST00000399380 HIRIP3Q9BW71 556 aaPredicted RBP10.55□□□□□ -0.72
CDH2-202ENST00000399380 PHLDB1Q86UU1 1377 aa10.55□□□□□ -0.72
CDH2-202ENST00000399380 HMGXB3Q12766 1538 aa10.54□□□□□ -0.72
CDH2-202ENST00000399380 CFTRP13569 1480 aa10.54□□□□□ -0.72
CDH2-202ENST00000399380 P3H3Q8IVL6 736 aa10.54□□□□□ -0.72
CDH2-202ENST00000399380 HNRNPUQ00839 825 aaKnown RBP eCLIP10.53□□□□□ -0.72
CDH2-202ENST00000399380 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.51□□□□□ -0.73
CDH2-202ENST00000399380 ERICH6BQ5W0A0 696 aa10.51□□□□□ -0.73
CDH2-202ENST00000399380 MYT1LQ9UL68 1186 aa10.5□□□□□ -0.73
CDH2-202ENST00000399380 FANCIQ9NVI1 1328 aa10.47□□□□□ -0.73
CDH2-202ENST00000399380 MTUS2Q5JR59 1369 aa10.47□□□□□ -0.73
CDH2-202ENST00000399380 PPP4R2Q9NY27 417 aa10.45□□□□□ -0.74
CDH2-202ENST00000399380 UACAQ9BZF9 1416 aa10.44□□□□□ -0.74
CDH2-202ENST00000399380 FYCO1Q9BQS8 1478 aa10.44□□□□□ -0.74
CDH2-202ENST00000399380 FMN1Q68DA7 1419 aa10.44□□□□□ -0.74
CDH2-202ENST00000399380 CADPSQ9ULU8 1353 aa10.44□□□□□ -0.74
CDH2-202ENST00000399380 CCDC18Q5T9S5 1454 aa10.44□□□□□ -0.74
CDH2-202ENST00000399380 CASKIN1Q8WXD9 1431 aa10.43□□□□□ -0.74
CDH2-202ENST00000399380 EIF4G2P78344 907 aaKnown RBP eCLIP10.43□□□□□ -0.74
CDH2-202ENST00000399380 FHOD3Q2V2M9 1422 aa10.42□□□□□ -0.74
CDH2-202ENST00000399380 FGD6Q6ZV73 1430 aa10.42□□□□□ -0.74
CDH2-202ENST00000399380 FGD5Q6ZNL6 1462 aa10.42□□□□□ -0.74
CDH2-202ENST00000399380 IRX6P78412 446 aaPredicted RBP10.42□□□□□ -0.74
CDH2-202ENST00000399380 AQRO60306 1485 aaKnown RBP eCLIP10.41□□□□□ -0.74
CDH2-202ENST00000399380 EFCAB5A4FU69 1503 aa10.41□□□□□ -0.74
CDH2-202ENST00000399380 PCF11O94913 1555 aaKnown RBP10.41□□□□□ -0.74
CDH2-202ENST00000399380 CFAP43Q8NDM7 1665 aa10.41□□□□□ -0.74
CDH2-202ENST00000399380 HFM1A2PYH4 1435 aa10.4□□□□□ -0.74
CDH2-202ENST00000399380 HSPA5P11021 654 aaKnown RBP10.39□□□□□ -0.75
CDH2-202ENST00000399380 MRS2Q9HD23 443 aa10.37□□□□□ -0.75
CDH2-202ENST00000399380 MSH5O43196 834 aa10.37□□□□□ -0.75
CDH2-202ENST00000399380 FAM9BQ8IZU0 186 aa10.37□□□□□ -0.75
CDH2-202ENST00000399380 MYOM3Q5VTT5 1437 aa10.35□□□□□ -0.75
CDH2-202ENST00000399380 WASHC2AQ641Q2 1341 aa10.34□□□□□ -0.75
CDH2-202ENST00000399380 RRP7BPQ9NSQ0 103 aa10.34□□□□□ -0.75
CDH2-202ENST00000399380 NAIPQ13075 1403 aa10.34□□□□□ -0.75
CDH2-202ENST00000399380 ZBED9Q6R2W3 1325 aa10.33□□□□□ -0.76
CDH2-202ENST00000399380 CHIC2Q9UKJ5 165 aa10.33□□□□□ -0.76
CDH2-202ENST00000399380 CNTLNQ9NXG0 1405 aa10.32□□□□□ -0.76
CDH2-202ENST00000399380 PTPN23Q9H3S7 1636 aa10.32□□□□□ -0.76
CDH2-202ENST00000399380 PRKRIP1Q9H875 184 aaPredicted RBP10.32□□□□□ -0.76
CDH2-202ENST00000399380 PRDM2Q13029 1718 aa10.32□□□□□ -0.76
CDH2-202ENST00000399380 SLC24A1O60721 1099 aa10.32□□□□□ -0.76
CDH2-202ENST00000399380 B4GALNT3Q6L9W6 998 aa10.31□□□□□ -0.76
CDH2-202ENST00000399380 NCOA2Q15596 1464 aa10.31□□□□□ -0.76
CDH2-202ENST00000399380 ANP32AP39687 249 aaKnown RBP10.31□□□□□ -0.76
CDH2-202ENST00000399380 FANCD2Q9BXW9 1451 aa10.31□□□□□ -0.76
CDH2-202ENST00000399380 ABCA10Q8WWZ4 1543 aa10.3□□□□□ -0.76
CDH2-202ENST00000399380 RTL5Q5HYW3 569 aaPredicted RBP10.3□□□□□ -0.76
CDH2-202ENST00000399380 NOP58Q9Y2X3 529 aaKnown RBP10.3□□□□□ -0.76
CDH2-202ENST00000399380 MPHOSPH9Q99550 1183 aa10.29□□□□□ -0.76
CDH2-202ENST00000399380 PTPRKQ15262 1439 aa10.29□□□□□ -0.76
CDH2-202ENST00000399380 L3MBTL2Q969R5 705 aa10.29□□□□□ -0.76
CDH2-202ENST00000399380 CCDC7Q96M83 1385 aa10.28□□□□□ -0.76
CDH2-202ENST00000399380 CCDC136Q96JN2 1154 aa10.28□□□□□ -0.76
CDH2-202ENST00000399380 CC2D2AQ9P2K1 1620 aa10.28□□□□□ -0.76
CDH2-202ENST00000399380 CUL7Q14999 1698 aa10.28□□□□□ -0.76
CDH2-202ENST00000399380 RAD54L2Q9Y4B4 1467 aa10.28□□□□□ -0.76
CDH2-202ENST00000399380 DEKP35659 375 aaKnown RBP10.27□□□□□ -0.77
CDH2-202ENST00000399380 EHBP1L1Q8N3D4 1523 aa10.27□□□□□ -0.77
CDH2-202ENST00000399380 DNMBPQ6XZF7 1577 aa10.26□□□□□ -0.77
CDH2-202ENST00000399380 SUPT6HQ7KZ85 1726 aaKnown RBP10.26□□□□□ -0.77
CDH2-202ENST00000399380 SNAPC4Q5SXM2 1469 aa10.25□□□□□ -0.77
CDH2-202ENST00000399380 POLA1P09884 1462 aaPredicted RBP10.25□□□□□ -0.77
CDH2-202ENST00000399380 POLR3GLQ9BT43 218 aa10.24□□□□□ -0.77
CDH2-202ENST00000399380 AKNAQ7Z591 1439 aa10.24□□□□□ -0.77
CDH2-202ENST00000399380 ZBTB47Q9UFB7 747 aaPredicted RBP10.24□□□□□ -0.77
CDH2-202ENST00000399380 THOC2Q8NI27 1593 aaKnown RBP10.24□□□□□ -0.77
CDH2-202ENST00000399380 NCOA1Q15788 1441 aa10.24□□□□□ -0.77
CDH2-202ENST00000399380 CCDC184Q52MB2 194 aa10.23□□□□□ -0.77
CDH2-202ENST00000399380 SLC4A1APQ9BWU0 796 aaKnown RBP10.23□□□□□ -0.77
CDH2-202ENST00000399380 TOPBP1Q92547 1522 aa10.23□□□□□ -0.77
CDH2-202ENST00000399380 NBR1Q14596 966 aa10.23□□□□□ -0.77
CDH2-202ENST00000399380 NUDCQ9Y266 331 aa10.23□□□□□ -0.77
CDH2-202ENST00000399380 CTTNBP2Q8WZ74 1663 aa10.22□□□□□ -0.77
CDH2-202ENST00000399380 MIA2Q96PC5 1412 aa10.21□□□□□ -0.77
CDH2-202ENST00000399380 GRIN2BQ13224 1484 aa10.21□□□□□ -0.77
CDH2-202ENST00000399380 KIF7Q2M1P5 1343 aa10.21□□□□□ -0.78
CDH2-202ENST00000399380 CNGB1Q14028 1251 aaPredicted RBP10.2□□□□□ -0.78
CDH2-202ENST00000399380 TMC1Q8TDI8 760 aa10.2□□□□□ -0.78
CDH2-202ENST00000399380 SMG6Q86US8 1419 aaKnown RBP10.2□□□□□ -0.78
CDH2-202ENST00000399380 IPO9Q96P70 1041 aaKnown RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 152.2 ms