RNA–Protein interactions for RNA: ENST00000399132.5

COL25A1-203, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL25A1, Length 2,724 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-203ENST00000399132 SCAF1Q9H7N4 1312 aaKnown RBP22.57■■□□□ 1.2
COL25A1-203ENST00000399132 WDR97A6NE52 1622 aa22.56■■□□□ 1.2
COL25A1-203ENST00000399132 MRC2Q9UBG0 1479 aa22.55■■□□□ 1.2
COL25A1-203ENST00000399132 ERCC6Q03468 1493 aa22.54■■□□□ 1.2
COL25A1-203ENST00000399132 ABCA5Q8WWZ7 1642 aa22.53■■□□□ 1.2
COL25A1-203ENST00000399132 CUL7Q14999 1698 aa22.52■■□□□ 1.2
COL25A1-203ENST00000399132 TARBP1Q13395 1621 aaKnown RBP22.51■■□□□ 1.19
COL25A1-203ENST00000399132 ZNF608Q9ULD9 1512 aaPredicted RBP22.5■■□□□ 1.19
COL25A1-203ENST00000399132 ARID3CA6NKF2 412 aa22.47■■□□□ 1.19
COL25A1-203ENST00000399132 PCF11O94913 1555 aaKnown RBP22.45■■□□□ 1.18
COL25A1-203ENST00000399132 FAM50AQ14320 339 aaKnown RBP22.44■■□□□ 1.18
COL25A1-203ENST00000399132 FHAD1B1AJZ9 1412 aa22.43■■□□□ 1.18
COL25A1-203ENST00000399132 FBLN2P98095 1184 aa22.42■■□□□ 1.18
COL25A1-203ENST00000399132 CTTNBP2Q8WZ74 1663 aa22.42■■□□□ 1.18
COL25A1-203ENST00000399132 TIAM1Q13009 1591 aa22.41■■□□□ 1.18
COL25A1-203ENST00000399132 CCNB3Q8WWL7 1395 aa22.4■■□□□ 1.18
COL25A1-203ENST00000399132 LRRC9Q6ZRR7 1453 aa22.37■■□□□ 1.17
COL25A1-203ENST00000399132 PHLDB1Q86UU1 1377 aa22.37■■□□□ 1.17
COL25A1-203ENST00000399132 PBRM1Q86U86 1689 aa22.34■■□□□ 1.17
COL25A1-203ENST00000399132 RRBP1Q9P2E9 1410 aaKnown RBP22.33■■□□□ 1.17
COL25A1-203ENST00000399132 GRIN2BQ13224 1484 aa22.32■■□□□ 1.16
COL25A1-203ENST00000399132 EFCAB5A4FU69 1503 aa22.31■■□□□ 1.16
COL25A1-203ENST00000399132 WDR62O43379 1518 aa22.31■■□□□ 1.16
COL25A1-203ENST00000399132 IFT140Q96RY7 1462 aa22.31■■□□□ 1.16
COL25A1-203ENST00000399132 CASKIN1Q8WXD9 1431 aa22.28■■□□□ 1.16
COL25A1-203ENST00000399132 FMN1Q68DA7 1419 aa22.28■■□□□ 1.16
COL25A1-203ENST00000399132 SNAPC4Q5SXM2 1469 aa22.26■■□□□ 1.15
COL25A1-203ENST00000399132 FYCO1Q9BQS8 1478 aa22.26■■□□□ 1.15
COL25A1-203ENST00000399132 MTUS2Q5JR59 1369 aa22.25■■□□□ 1.15
COL25A1-203ENST00000399132 ADAMTS12P58397 1594 aa22.25■■□□□ 1.15
COL25A1-203ENST00000399132 CHMP7Q8WUX9 453 aaPredicted RBP22.25■■□□□ 1.15
COL25A1-203ENST00000399132 DHX57Q6P158 1386 aaKnown RBP22.21■■□□□ 1.15
COL25A1-203ENST00000399132 EIF4G3O43432 1585 aaKnown RBP22.2■■□□□ 1.14
COL25A1-203ENST00000399132 MAP3K1Q13233 1512 aa22.2■■□□□ 1.14
COL25A1-203ENST00000399132 SAMD9Q5K651 1589 aa22.2■■□□□ 1.14
COL25A1-203ENST00000399132 CFAP43Q8NDM7 1665 aa22.19■■□□□ 1.14
COL25A1-203ENST00000399132 IQGAP2Q13576 1575 aa22.18■■□□□ 1.14
COL25A1-203ENST00000399132 THOC2Q8NI27 1593 aaKnown RBP22.17■■□□□ 1.14
COL25A1-203ENST00000399132 DIEXFQ68CQ4 756 aaKnown RBP22.15■■□□□ 1.14
COL25A1-203ENST00000399132 RAB3GAP2Q9H2M9 1393 aa22.15■■□□□ 1.14
COL25A1-203ENST00000399132 LRRIQ1Q96JM4 1722 aa22.12■■□□□ 1.13
COL25A1-203ENST00000399132 GRIN2AQ12879 1464 aa22.1■■□□□ 1.13
COL25A1-203ENST00000399132 ZNF316A6NFI3 1004 aaPredicted RBP22.09■■□□□ 1.13
COL25A1-203ENST00000399132 CDK13Q14004 1512 aaKnown RBP22.07■■□□□ 1.12
COL25A1-203ENST00000399132 NCOA2Q15596 1464 aa22.04■■□□□ 1.12
COL25A1-203ENST00000399132 CHIC2Q9UKJ5 165 aa22.04■■□□□ 1.12
COL25A1-203ENST00000399132 FGD6Q6ZV73 1430 aa22.03■■□□□ 1.12
COL25A1-203ENST00000399132 SETD5Q9C0A6 1442 aa22.03■■□□□ 1.12
COL25A1-203ENST00000399132 NEUROD1Q13562 356 aa22.03■■□□□ 1.12
COL25A1-203ENST00000399132 MAGI3Q5TCQ9 1506 aa22.03■■□□□ 1.12
COL25A1-203ENST00000399132 KIAA0586Q9BVV6 1533 aa22.02■■□□□ 1.12
COL25A1-203ENST00000399132 DISP1Q96F81 1524 aa21.99■■□□□ 1.11
COL25A1-203ENST00000399132 SLC24A1O60721 1099 aa21.99■■□□□ 1.11
COL25A1-203ENST00000399132 SIN3AQ96ST3 1273 aa21.99■■□□□ 1.11
COL25A1-203ENST00000399132 JPH4Q96JJ6 628 aa21.98■■□□□ 1.11
COL25A1-203ENST00000399132 EPRSP07814 1512 aaKnown RBP21.98■■□□□ 1.11
COL25A1-203ENST00000399132 SYNJ2O15056 1496 aa21.98■■□□□ 1.11
COL25A1-203ENST00000399132 MAGI1Q96QZ7 1491 aaPredicted RBP21.97■■□□□ 1.11
COL25A1-203ENST00000399132 CEP170Q5SW79 1584 aa21.96■■□□□ 1.11
COL25A1-203ENST00000399132 UGGT2Q9NYU1 1516 aa21.96■■□□□ 1.11
COL25A1-203ENST00000399132 PTPRKQ15262 1439 aa21.95■■□□□ 1.1
COL25A1-203ENST00000399132 RRP7BPQ9NSQ0 103 aa21.95■■□□□ 1.1
COL25A1-203ENST00000399132 MYOM3Q5VTT5 1437 aa21.94■■□□□ 1.1
COL25A1-203ENST00000399132 KIAA0556O60303 1618 aa21.93■■□□□ 1.1
COL25A1-203ENST00000399132 HECW1Q76N89 1606 aa21.93■■□□□ 1.1
COL25A1-203ENST00000399132 EHBP1L1Q8N3D4 1523 aa21.91■■□□□ 1.1
COL25A1-203ENST00000399132 SUPT6HQ7KZ85 1726 aaKnown RBP21.91■■□□□ 1.1
COL25A1-203ENST00000399132 CCDC18Q5T9S5 1454 aa21.9■■□□□ 1.1
COL25A1-203ENST00000399132 CLSPNQ9HAW4 1339 aa21.9■■□□□ 1.1
COL25A1-203ENST00000399132 PLB1Q6P1J6 1458 aa21.9■■□□□ 1.1
COL25A1-203ENST00000399132 ZNF644Q9H582 1327 aaPredicted RBP21.87■■□□□ 1.09
COL25A1-203ENST00000399132 MAPKBP1O60336 1514 aa21.86■■□□□ 1.09
COL25A1-203ENST00000399132 NUP153P49790 1475 aaKnown RBP21.86■■□□□ 1.09
COL25A1-203ENST00000399132 ZNF777Q9ULD5 760 aaPredicted RBP21.84■■□□□ 1.09
COL25A1-203ENST00000399132 PRG4Q92954 1404 aaPredicted RBP21.82■■□□□ 1.08
COL25A1-203ENST00000399132 PTPN23Q9H3S7 1636 aa21.81■■□□□ 1.08
COL25A1-203ENST00000399132 YTHDC1Q96MU7 727 aaKnown RBP21.8■■□□□ 1.08
COL25A1-203ENST00000399132 NUP160Q12769 1436 aa21.8■■□□□ 1.08
COL25A1-203ENST00000399132 CARMIL2Q6F5E8 1435 aa21.79■■□□□ 1.08
COL25A1-203ENST00000399132 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.79■■□□□ 1.08
COL25A1-203ENST00000399132 MIER1Q8N108 512 aa21.79■■□□□ 1.08
COL25A1-203ENST00000399132 TRIM52Q96A61 297 aa21.79■■□□□ 1.08
COL25A1-203ENST00000399132 CDK11AQ9UQ88 783 aaPredicted RBP21.79■■□□□ 1.08
COL25A1-203ENST00000399132 RAPGEF6Q8TEU7 1601 aa21.78■■□□□ 1.08
COL25A1-203ENST00000399132 ACIN1Q9UKV3 1341 aaKnown RBP21.78■■□□□ 1.08
COL25A1-203ENST00000399132 ARHGEF11O15085 1522 aa21.75■■□□□ 1.07
COL25A1-203ENST00000399132 NAIPQ13075 1403 aa21.74■■□□□ 1.07
COL25A1-203ENST00000399132 HIRIP3Q9BW71 556 aaPredicted RBP21.74■■□□□ 1.07
COL25A1-203ENST00000399132 HFM1A2PYH4 1435 aa21.72■■□□□ 1.07
COL25A1-203ENST00000399132 CFDP1Q9UEE9 299 aaPredicted RBP21.71■■□□□ 1.07
COL25A1-203ENST00000399132 FOXD1Q16676 465 aa21.7■■□□□ 1.06
COL25A1-203ENST00000399132 PLEKHD1A6NEE1 506 aa21.67■■□□□ 1.06
COL25A1-203ENST00000399132 PTPRGP23470 1445 aa21.64■■□□□ 1.06
COL25A1-203ENST00000399132 CHD1O14646 1710 aa21.64■■□□□ 1.06
COL25A1-203ENST00000399132 TROQ12816 1431 aaPredicted RBP21.64■■□□□ 1.05
COL25A1-203ENST00000399132 GTF3C3Q9Y5Q9 886 aa21.63■■□□□ 1.05
COL25A1-203ENST00000399132 TCOF1Q13428 1488 aaKnown RBP21.63■■□□□ 1.05
COL25A1-203ENST00000399132 KDM6BO15054 1643 aa21.62■■□□□ 1.05
COL25A1-203ENST00000399132 KIF14Q15058 1648 aa21.62■■□□□ 1.05
COL25A1-203ENST00000399132 MIA2Q96PC5 1412 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms