RNA–Protein interactions for RNA: ENST00000398249.8

GSK3A-202, Transcript of glycogen synthase kinase 3 alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GSK3A, Length 3,524 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSK3A-202ENST00000398249 ERICH3Q5RHP9 1530 aa13.32□□□□□ -0.28
GSK3A-202ENST00000398249 KANK4Q5T7N3 995 aaPredicted RBP13.29□□□□□ -0.28
GSK3A-202ENST00000398249 CADPSQ9ULU8 1353 aa13.29□□□□□ -0.28
GSK3A-202ENST00000398249 RRBP1Q9P2E9 1410 aaKnown RBP13.29□□□□□ -0.28
GSK3A-202ENST00000398249 AEBP2Q6ZN18 517 aaPredicted RBP13.29□□□□□ -0.28
GSK3A-202ENST00000398249 PRXQ9BXM0 1461 aa13.27□□□□□ -0.29
GSK3A-202ENST00000398249 MAPKBP1O60336 1514 aa13.26□□□□□ -0.29
GSK3A-202ENST00000398249 RANGAP1P46060 587 aaPredicted RBP13.25□□□□□ -0.29
GSK3A-202ENST00000398249 KIF27Q86VH2 1401 aa13.21□□□□□ -0.29
GSK3A-202ENST00000398249 WDR97A6NE52 1622 aa13.18□□□□□ -0.3
GSK3A-202ENST00000398249 BCANQ96GW7 911 aa13.17□□□□□ -0.3
GSK3A-202ENST00000398249 A0A0U1RQG5 324 aaPredicted RBP13.16□□□□□ -0.3
GSK3A-202ENST00000398249 RTN4Q9NQC3 1192 aaKnown RBP13.16□□□□□ -0.3
GSK3A-202ENST00000398249 LAMC3Q9Y6N6 1575 aa13.14□□□□□ -0.31
GSK3A-202ENST00000398249 DNMBPQ6XZF7 1577 aa13.14□□□□□ -0.31
GSK3A-202ENST00000398249 FANCD2Q9BXW9 1451 aa13.14□□□□□ -0.31
GSK3A-202ENST00000398249 CCNB3Q8WWL7 1395 aa13.13□□□□□ -0.31
GSK3A-202ENST00000398249 FKBP8Q14318 412 aa13.13□□□□□ -0.31
GSK3A-202ENST00000398249 ARHGAP35Q9NRY4 1499 aa13.13□□□□□ -0.31
GSK3A-202ENST00000398249 RAB3GAP2Q9H2M9 1393 aa13.12□□□□□ -0.31
GSK3A-202ENST00000398249 FGD5Q6ZNL6 1462 aa13.11□□□□□ -0.31
GSK3A-202ENST00000398249 RBM19Q9Y4C8 960 aaKnown RBP13.11□□□□□ -0.31
GSK3A-202ENST00000398249 PPP1R15AO75807 674 aaPredicted RBP13.09□□□□□ -0.31
GSK3A-202ENST00000398249 KLHL34Q8N239 644 aa13.09□□□□□ -0.31
GSK3A-202ENST00000398249 MSH5O43196 834 aa13.08□□□□□ -0.32
GSK3A-202ENST00000398249 IGF1RP08069 1367 aa13.07□□□□□ -0.32
GSK3A-202ENST00000398249 NEFLP07196 543 aa13.06□□□□□ -0.32
GSK3A-202ENST00000398249 DEKP35659 375 aaKnown RBP13.06□□□□□ -0.32
GSK3A-202ENST00000398249 PDE4CQ08493 712 aa13.06□□□□□ -0.32
GSK3A-202ENST00000398249 TIAM1Q13009 1591 aa13.06□□□□□ -0.32
GSK3A-202ENST00000398249 ABCA10Q8WWZ4 1543 aa13.06□□□□□ -0.32
GSK3A-202ENST00000398249 DDX10Q13206 875 aaKnown RBP13.06□□□□□ -0.32
GSK3A-202ENST00000398249 TOPBP1Q92547 1522 aa13.05□□□□□ -0.32
GSK3A-202ENST00000398249 SIN3AQ96ST3 1273 aa13.03□□□□□ -0.32
GSK3A-202ENST00000398249 ITGAEP38570 1179 aa13.03□□□□□ -0.32
GSK3A-202ENST00000398249 POLA1P09884 1462 aaPredicted RBP13.01□□□□□ -0.33
GSK3A-202ENST00000398249 NESP48681 1621 aa13.01□□□□□ -0.33
GSK3A-202ENST00000398249 SETD5Q9C0A6 1442 aa13.01□□□□□ -0.33
GSK3A-202ENST00000398249 CUL7Q14999 1698 aa13□□□□□ -0.33
GSK3A-202ENST00000398249 MAP3K1Q13233 1512 aa13□□□□□ -0.33
GSK3A-202ENST00000398249 PDIA4P13667 645 aaKnown RBP13□□□□□ -0.33
GSK3A-202ENST00000398249 CFAP43Q8NDM7 1665 aa12.99□□□□□ -0.33
GSK3A-202ENST00000398249 PHLDB1Q86UU1 1377 aa12.99□□□□□ -0.33
GSK3A-202ENST00000398249 TRIM52Q96A61 297 aa12.99□□□□□ -0.33
GSK3A-202ENST00000398249 HIRIP3Q9BW71 556 aaPredicted RBP12.99□□□□□ -0.33
GSK3A-202ENST00000398249 CARMIL1Q5VZK9 1371 aa12.98□□□□□ -0.33
GSK3A-202ENST00000398249 LRRC9Q6ZRR7 1453 aa12.97□□□□□ -0.33
GSK3A-202ENST00000398249 PDS5BQ9NTI5 1447 aa12.97□□□□□ -0.33
GSK3A-202ENST00000398249 URB2Q14146 1524 aaKnown RBP12.97□□□□□ -0.33
GSK3A-202ENST00000398249 CCER2I3L3R5 266 aa12.96□□□□□ -0.34
GSK3A-202ENST00000398249 ABCA5Q8WWZ7 1642 aa12.94□□□□□ -0.34
GSK3A-202ENST00000398249 RAD54L2Q9Y4B4 1467 aa12.93□□□□□ -0.34
GSK3A-202ENST00000398249 KIF21AQ7Z4S6 1674 aa12.93□□□□□ -0.34
GSK3A-202ENST00000398249 BCL11BQ9C0K0 894 aaPredicted RBP12.92□□□□□ -0.34
GSK3A-202ENST00000398249 ERICH6BQ5W0A0 696 aa12.92□□□□□ -0.34
GSK3A-202ENST00000398249 PCF11O94913 1555 aaKnown RBP12.92□□□□□ -0.34
GSK3A-202ENST00000398249 KDM5BQ9UGL1 1544 aa12.91□□□□□ -0.34
GSK3A-202ENST00000398249 CTTNBP2Q8WZ74 1663 aa12.91□□□□□ -0.34
GSK3A-202ENST00000398249 EFCAB5A4FU69 1503 aa12.9□□□□□ -0.34
GSK3A-202ENST00000398249 FANCIQ9NVI1 1328 aa12.88□□□□□ -0.35
GSK3A-202ENST00000398249 VSIG10Q8N0Z9 540 aa12.88□□□□□ -0.35
GSK3A-202ENST00000398249 TARBP1Q13395 1621 aaKnown RBP12.88□□□□□ -0.35
GSK3A-202ENST00000398249 IL27Q8NEV9 243 aa12.87□□□□□ -0.35
GSK3A-202ENST00000398249 TIMELESSQ9UNS1 1208 aa12.87□□□□□ -0.35
GSK3A-202ENST00000398249 GLIPR1L2Q4G1C9 344 aa12.86□□□□□ -0.35
GSK3A-202ENST00000398249 ANP32CO43423 234 aa12.85□□□□□ -0.35
GSK3A-202ENST00000398249 FHAD1B1AJZ9 1412 aa12.84□□□□□ -0.35
GSK3A-202ENST00000398249 AQRO60306 1485 aaKnown RBP eCLIP12.84□□□□□ -0.352e-6■■■□□ 17.7
GSK3A-202ENST00000398249 LRRIQ1Q96JM4 1722 aa12.84□□□□□ -0.35
GSK3A-202ENST00000398249 ZMYND15Q9H091 742 aa12.83□□□□□ -0.36
GSK3A-202ENST00000398249 IRX6P78412 446 aaPredicted RBP12.83□□□□□ -0.36
GSK3A-202ENST00000398249 GAPVD1Q14C86 1478 aa12.83□□□□□ -0.36
GSK3A-202ENST00000398249 FAM50AQ14320 339 aaKnown RBP12.82□□□□□ -0.36
GSK3A-202ENST00000398249 PTPRKQ15262 1439 aa12.81□□□□□ -0.36
GSK3A-202ENST00000398249 NCBP3Q53F19 620 aaKnown RBP12.8□□□□□ -0.36
GSK3A-202ENST00000398249 MYT1LQ9UL68 1186 aa12.8□□□□□ -0.36
GSK3A-202ENST00000398249 MRC2Q9UBG0 1479 aa12.8□□□□□ -0.36
GSK3A-202ENST00000398249 SAMD9Q5K651 1589 aa12.8□□□□□ -0.36
GSK3A-202ENST00000398249 PTPN23Q9H3S7 1636 aa12.8□□□□□ -0.36
GSK3A-202ENST00000398249 FYCO1Q9BQS8 1478 aa12.79□□□□□ -0.36
GSK3A-202ENST00000398249 DNAJC5BQ9UF47 199 aa12.79□□□□□ -0.36
GSK3A-202ENST00000398249 NBR1Q14596 966 aa12.79□□□□□ -0.36
GSK3A-202ENST00000398249 PBRM1Q86U86 1689 aa12.79□□□□□ -0.36
GSK3A-202ENST00000398249 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.79□□□□□ -0.36
GSK3A-202ENST00000398249 PLPPR3Q6T4P5 718 aa12.77□□□□□ -0.37
GSK3A-202ENST00000398249 CASKIN1Q8WXD9 1431 aa12.77□□□□□ -0.37
GSK3A-202ENST00000398249 CCDC18Q5T9S5 1454 aa12.77□□□□□ -0.37
GSK3A-202ENST00000398249 WDR62O43379 1518 aa12.76□□□□□ -0.37
GSK3A-202ENST00000398249 FGD1P98174 961 aa12.76□□□□□ -0.37
GSK3A-202ENST00000398249 CCDC184Q52MB2 194 aa12.76□□□□□ -0.37
GSK3A-202ENST00000398249 DENND4BO75064 1496 aaPredicted RBP12.75□□□□□ -0.37
GSK3A-202ENST00000398249 HNRNPUQ00839 825 aaKnown RBP eCLIP12.75□□□□□ -0.37
GSK3A-202ENST00000398249 UACAQ9BZF9 1416 aa12.74□□□□□ -0.37
GSK3A-202ENST00000398249 THOC2Q8NI27 1593 aaKnown RBP12.74□□□□□ -0.37
GSK3A-202ENST00000398249 WASHC2AQ641Q2 1341 aa12.74□□□□□ -0.37
GSK3A-202ENST00000398249 TDRD9Q8NDG6 1382 aaKnown RBP12.74□□□□□ -0.37
GSK3A-202ENST00000398249 FHOD3Q2V2M9 1422 aa12.73□□□□□ -0.37
GSK3A-202ENST00000398249 NCOA2Q15596 1464 aa12.73□□□□□ -0.37
GSK3A-202ENST00000398249 RBM10P98175 930 aaKnown RBP12.73□□□□□ -0.37
GSK3A-202ENST00000398249 FMN1Q68DA7 1419 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms