RNA–Protein interactions for RNA: ENST00000397938.6

EWSR1-206, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-206ENST00000397938 LRRC9Q6ZRR7 1453 aa24.66■■□□□ 1.54
EWSR1-206ENST00000397938 NCAPD3P42695 1498 aa24.64■■□□□ 1.54
EWSR1-206ENST00000397938 PPP1R15AO75807 674 aaPredicted RBP24.64■■□□□ 1.54
EWSR1-206ENST00000397938 CFTRP13569 1480 aa24.63■■□□□ 1.53
EWSR1-206ENST00000397938 PHLDB1Q86UU1 1377 aa24.61■■□□□ 1.53
EWSR1-206ENST00000397938 SIN3AQ96ST3 1273 aa24.6■■□□□ 1.53
EWSR1-206ENST00000397938 TIMELESSQ9UNS1 1208 aa24.6■■□□□ 1.53
EWSR1-206ENST00000397938 CFAP43Q8NDM7 1665 aa24.6■■□□□ 1.53
EWSR1-206ENST00000397938 CCER2I3L3R5 266 aa24.57■■□□□ 1.52
EWSR1-206ENST00000397938 IGF1RP08069 1367 aa24.56■■□□□ 1.52
EWSR1-206ENST00000397938 NEFLP07196 543 aa24.56■■□□□ 1.52
EWSR1-206ENST00000397938 PRDM2Q13029 1718 aa24.54■■□□□ 1.52
EWSR1-206ENST00000397938 FHAD1B1AJZ9 1412 aa24.51■■□□□ 1.51
EWSR1-206ENST00000397938 FAM50AQ14320 339 aaKnown RBP24.49■■□□□ 1.51
EWSR1-206ENST00000397938 RBM19Q9Y4C8 960 aaKnown RBP24.49■■□□□ 1.51
EWSR1-206ENST00000397938 PCF11O94913 1555 aaKnown RBP24.49■■□□□ 1.51
EWSR1-206ENST00000397938 ANP32CO43423 234 aa24.47■■□□□ 1.51
EWSR1-206ENST00000397938 CARMIL1Q5VZK9 1371 aa24.46■■□□□ 1.51
EWSR1-206ENST00000397938 TRIM52Q96A61 297 aa24.44■■□□□ 1.5
EWSR1-206ENST00000397938 BCL11AQ9H165 835 aa24.43■■□□□ 1.5
EWSR1-206ENST00000397938 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.41■■□□□ 1.56e-6■□□□□ 11
EWSR1-206ENST00000397938 HIRIP3Q9BW71 556 aaPredicted RBP24.41■■□□□ 1.5
EWSR1-206ENST00000397938 FYCO1Q9BQS8 1478 aa24.35■■□□□ 1.49
EWSR1-206ENST00000397938 FGD5Q6ZNL6 1462 aa24.35■■□□□ 1.49
EWSR1-206ENST00000397938 TONSLQ96HA7 1378 aa24.31■■□□□ 1.48
EWSR1-206ENST00000397938 AQRO60306 1485 aaKnown RBP eCLIP24.29■■□□□ 1.482e-7■■■□□ 18.8
EWSR1-206ENST00000397938 EFCAB5A4FU69 1503 aa24.28■■□□□ 1.48
EWSR1-206ENST00000397938 CASKIN1Q8WXD9 1431 aa24.28■■□□□ 1.48
EWSR1-206ENST00000397938 CCDC18Q5T9S5 1454 aa24.28■■□□□ 1.48
EWSR1-206ENST00000397938 FHOD3Q2V2M9 1422 aa24.27■■□□□ 1.48
EWSR1-206ENST00000397938 P3H3Q8IVL6 736 aa24.26■■□□□ 1.47
EWSR1-206ENST00000397938 FGD6Q6ZV73 1430 aa24.25■■□□□ 1.47
EWSR1-206ENST00000397938 UACAQ9BZF9 1416 aa24.24■■□□□ 1.47
EWSR1-206ENST00000397938 ATP1B4Q9UN42 357 aaPredicted RBP24.24■■□□□ 1.47
EWSR1-206ENST00000397938 HFM1A2PYH4 1435 aa24.22■■□□□ 1.47
EWSR1-206ENST00000397938 MSH5O43196 834 aa24.22■■□□□ 1.47
EWSR1-206ENST00000397938 PTPN23Q9H3S7 1636 aa24.21■■□□□ 1.47
EWSR1-206ENST00000397938 CADPSQ9ULU8 1353 aa24.2■■□□□ 1.46
EWSR1-206ENST00000397938 KDM5BQ9UGL1 1544 aa24.18■■□□□ 1.46
EWSR1-206ENST00000397938 FANCIQ9NVI1 1328 aa24.18■■□□□ 1.46
EWSR1-206ENST00000397938 PTPRKQ15262 1439 aa24.15■■□□□ 1.46
EWSR1-206ENST00000397938 CTTNBP2Q8WZ74 1663 aa24.15■■□□□ 1.46
EWSR1-206ENST00000397938 HNRNPUQ00839 825 aaKnown RBP eCLIP24.15■■□□□ 1.46
EWSR1-206ENST00000397938 SNAPC4Q5SXM2 1469 aa24.12■■□□□ 1.45
EWSR1-206ENST00000397938 FMN1Q68DA7 1419 aa24.11■■□□□ 1.45
EWSR1-206ENST00000397938 CC2D2AQ9P2K1 1620 aa24.11■■□□□ 1.45
EWSR1-206ENST00000397938 CDK11AQ9UQ88 783 aaPredicted RBP24.11■■□□□ 1.45
EWSR1-206ENST00000397938 NAIPQ13075 1403 aa24.11■■□□□ 1.45
EWSR1-206ENST00000397938 CUL7Q14999 1698 aa24.09■■□□□ 1.45
EWSR1-206ENST00000397938 ABCA10Q8WWZ4 1543 aa24.07■■□□□ 1.44
EWSR1-206ENST00000397938 MTUS2Q5JR59 1369 aa24.07■■□□□ 1.44
EWSR1-206ENST00000397938 ERICH6BQ5W0A0 696 aa24.06■■□□□ 1.44
EWSR1-206ENST00000397938 IRX6P78412 446 aaPredicted RBP24.05■■□□□ 1.44
EWSR1-206ENST00000397938 LRRIQ1Q96JM4 1722 aa24.04■■□□□ 1.44
EWSR1-206ENST00000397938 MYOM3Q5VTT5 1437 aa24.03■■□□□ 1.44
EWSR1-206ENST00000397938 WASHC2AQ641Q2 1341 aa24.03■■□□□ 1.44
EWSR1-206ENST00000397938 NCOA2Q15596 1464 aa24.03■■□□□ 1.44
EWSR1-206ENST00000397938 DNMBPQ6XZF7 1577 aa24.02■■□□□ 1.44
EWSR1-206ENST00000397938 RAD54L2Q9Y4B4 1467 aa24.01■■□□□ 1.43
EWSR1-206ENST00000397938 FANCD2Q9BXW9 1451 aa24■■□□□ 1.43
EWSR1-206ENST00000397938 SUPT6HQ7KZ85 1726 aaKnown RBP23.99■■□□□ 1.43
EWSR1-206ENST00000397938 HSPA5P11021 654 aaKnown RBP23.98■■□□□ 1.43
EWSR1-206ENST00000397938 SAMD9Q5K651 1589 aa23.98■■□□□ 1.43
EWSR1-206ENST00000397938 HECW1Q76N89 1606 aa23.97■■□□□ 1.43
EWSR1-206ENST00000397938 POLA1P09884 1462 aaPredicted RBP23.97■■□□□ 1.43
EWSR1-206ENST00000397938 ERICH6Q7L0X2 663 aa23.97■■□□□ 1.43
EWSR1-206ENST00000397938 THOC2Q8NI27 1593 aaKnown RBP23.97■■□□□ 1.43
EWSR1-206ENST00000397938 CNTLNQ9NXG0 1405 aa23.97■■□□□ 1.43
EWSR1-206ENST00000397938 PPP4R2Q9NY27 417 aa23.97■■□□□ 1.43
EWSR1-206ENST00000397938 EHBP1L1Q8N3D4 1523 aa23.95■■□□□ 1.43
EWSR1-206ENST00000397938 GRIN2BQ13224 1484 aa23.95■■□□□ 1.42
EWSR1-206ENST00000397938 GCC2Q8IWJ2 1684 aa23.95■■□□□ 1.42
EWSR1-206ENST00000397938 TOPBP1Q92547 1522 aa23.93■■□□□ 1.42
EWSR1-206ENST00000397938 DENND4BO75064 1496 aaPredicted RBP23.93■■□□□ 1.42
EWSR1-206ENST00000397938 UGGT2Q9NYU1 1516 aa23.91■■□□□ 1.42
EWSR1-206ENST00000397938 ARHGEF11O15085 1522 aa23.9■■□□□ 1.42
EWSR1-206ENST00000397938 EIF4G2P78344 907 aaKnown RBP eCLIP23.9■■□□□ 1.42
EWSR1-206ENST00000397938 CCDC184Q52MB2 194 aa23.88■■□□□ 1.41
EWSR1-206ENST00000397938 TCOF1Q13428 1488 aaKnown RBP23.86■■□□□ 1.41
EWSR1-206ENST00000397938 NCOA1Q15788 1441 aa23.86■■□□□ 1.41
EWSR1-206ENST00000397938 AKNAQ7Z591 1439 aa23.86■■□□□ 1.41
EWSR1-206ENST00000397938 ZBED9Q6R2W3 1325 aa23.84■■□□□ 1.41
EWSR1-206ENST00000397938 PRKRIP1Q9H875 184 aaPredicted RBP23.83■■□□□ 1.41
EWSR1-206ENST00000397938 MYT1LQ9UL68 1186 aa23.83■■□□□ 1.41
EWSR1-206ENST00000397938 KIF21AQ7Z4S6 1674 aa23.83■■□□□ 1.41
EWSR1-206ENST00000397938 CCDC7Q96M83 1385 aa23.83■■□□□ 1.4
EWSR1-206ENST00000397938 KDM6BO15054 1643 aa23.81■■□□□ 1.4
EWSR1-206ENST00000397938 MAGI3Q5TCQ9 1506 aa23.81■■□□□ 1.4
EWSR1-206ENST00000397938 RRP7BPQ9NSQ0 103 aa23.81■■□□□ 1.4
EWSR1-206ENST00000397938 C11orf95C9JLR9 678 aaPredicted RBP23.77■■□□□ 1.4
EWSR1-206ENST00000397938 B4GALNT3Q6L9W6 998 aa23.77■■□□□ 1.4
EWSR1-206ENST00000397938 FAM9BQ8IZU0 186 aa23.77■■□□□ 1.4
EWSR1-206ENST00000397938 MRS2Q9HD23 443 aa23.77■■□□□ 1.4
EWSR1-206ENST00000397938 POLR1AO95602 1720 aaPredicted RBP23.76■■□□□ 1.39
EWSR1-206ENST00000397938 ABCA5Q8WWZ7 1642 aa23.76■■□□□ 1.39
EWSR1-206ENST00000397938 L3MBTL2Q969R5 705 aa23.75■■□□□ 1.39
EWSR1-206ENST00000397938 CHIC2Q9UKJ5 165 aa23.74■■□□□ 1.39
EWSR1-206ENST00000397938 MPHOSPH9Q99550 1183 aa23.73■■□□□ 1.39
EWSR1-206ENST00000397938 TEX14Q8IWB6 1497 aa23.69■■□□□ 1.38
EWSR1-206ENST00000397938 RPRD2Q5VT52 1461 aaKnown RBP23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms