RNA–Protein interactions for RNA: ENST00000397358.7

HMBOX1-203, Transcript of homeobox containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMBOX1, Length 4,082 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-203ENST00000397358 HMGXB3Q12766 1538 aa18.68■□□□□ 0.58
HMBOX1-203ENST00000397358 SETD5Q9C0A6 1442 aa18.68■□□□□ 0.58
HMBOX1-203ENST00000397358 PHLDB1Q86UU1 1377 aa18.66■□□□□ 0.58
HMBOX1-203ENST00000397358 FGD5Q6ZNL6 1462 aa18.65■□□□□ 0.58
HMBOX1-203ENST00000397358 ARID3CA6NKF2 412 aa18.64■□□□□ 0.58
HMBOX1-203ENST00000397358 FHOD3Q2V2M9 1422 aa18.63■□□□□ 0.57
HMBOX1-203ENST00000397358 TRIM52Q96A61 297 aa18.62■□□□□ 0.57
HMBOX1-203ENST00000397358 FKBP8Q14318 412 aa18.59■□□□□ 0.57
HMBOX1-203ENST00000397358 ANP32CO43423 234 aa18.59■□□□□ 0.57
HMBOX1-203ENST00000397358 FHAD1B1AJZ9 1412 aa18.58■□□□□ 0.57
HMBOX1-203ENST00000397358 RAD54L2Q9Y4B4 1467 aa18.58■□□□□ 0.56
HMBOX1-203ENST00000397358 NEFLP07196 543 aa18.58■□□□□ 0.56
HMBOX1-203ENST00000397358 CHIC2Q9UKJ5 165 aa18.57■□□□□ 0.56
HMBOX1-203ENST00000397358 LRRC9Q6ZRR7 1453 aa18.57■□□□□ 0.56
HMBOX1-203ENST00000397358 MTUS2Q5JR59 1369 aa18.56■□□□□ 0.56
HMBOX1-203ENST00000397358 MYT1Q01538 1121 aa18.55■□□□□ 0.56
HMBOX1-203ENST00000397358 TONSLQ96HA7 1378 aa18.55■□□□□ 0.56
HMBOX1-203ENST00000397358 TIAM1Q13009 1591 aa18.52■□□□□ 0.56
HMBOX1-203ENST00000397358 FANCD2Q9BXW9 1451 aa18.52■□□□□ 0.56
HMBOX1-203ENST00000397358 RRP7BPQ9NSQ0 103 aa18.51■□□□□ 0.55
HMBOX1-203ENST00000397358 PPP1R15AO75807 674 aaPredicted RBP18.5■□□□□ 0.55
HMBOX1-203ENST00000397358 TDRD9Q8NDG6 1382 aaKnown RBP18.5■□□□□ 0.55
HMBOX1-203ENST00000397358 CNGB1Q14028 1251 aaPredicted RBP18.46■□□□□ 0.55
HMBOX1-203ENST00000397358 MAPKBP1O60336 1514 aa18.46■□□□□ 0.54
HMBOX1-203ENST00000397358 WDR97A6NE52 1622 aa18.45■□□□□ 0.54
HMBOX1-203ENST00000397358 NESP48681 1621 aa18.44■□□□□ 0.54
HMBOX1-203ENST00000397358 TSHZ2Q9NRE2 1034 aa18.42■□□□□ 0.54
HMBOX1-203ENST00000397358 PCF11O94913 1555 aaKnown RBP18.39■□□□□ 0.54
HMBOX1-203ENST00000397358 TIMELESSQ9UNS1 1208 aa18.38■□□□□ 0.53
HMBOX1-203ENST00000397358 HNRNPUQ00839 825 aaKnown RBP eCLIP18.36■□□□□ 0.53
HMBOX1-203ENST00000397358 POLA1P09884 1462 aaPredicted RBP18.36■□□□□ 0.53
HMBOX1-203ENST00000397358 CC2D2AQ9P2K1 1620 aa18.36■□□□□ 0.53
HMBOX1-203ENST00000397358 IRX6P78412 446 aaPredicted RBP18.35■□□□□ 0.53
HMBOX1-203ENST00000397358 POLR3GLQ9BT43 218 aa18.34■□□□□ 0.53
HMBOX1-203ENST00000397358 FMN1Q68DA7 1419 aa18.34■□□□□ 0.53
HMBOX1-203ENST00000397358 FOXD1Q16676 465 aa18.34■□□□□ 0.53
HMBOX1-203ENST00000397358 MAP3K1Q13233 1512 aa18.33■□□□□ 0.53
HMBOX1-203ENST00000397358 CASKIN1Q8WXD9 1431 aa18.33■□□□□ 0.53
HMBOX1-203ENST00000397358 FGD6Q6ZV73 1430 aa18.33■□□□□ 0.52
HMBOX1-203ENST00000397358 TOPBP1Q92547 1522 aa18.32■□□□□ 0.52
HMBOX1-203ENST00000397358 DNAJC5BQ9UF47 199 aa18.31■□□□□ 0.52
HMBOX1-203ENST00000397358 CCDC18Q5T9S5 1454 aa18.3■□□□□ 0.52
HMBOX1-203ENST00000397358 FYCO1Q9BQS8 1478 aa18.29■□□□□ 0.52
HMBOX1-203ENST00000397358 CCER2I3L3R5 266 aa18.28■□□□□ 0.52
HMBOX1-203ENST00000397358 ABCA10Q8WWZ4 1543 aa18.25■□□□□ 0.51
HMBOX1-203ENST00000397358 HSPA5P11021 654 aaKnown RBP18.25■□□□□ 0.51
HMBOX1-203ENST00000397358 ZNF326Q5BKZ1 582 aaKnown RBP18.25■□□□□ 0.51
HMBOX1-203ENST00000397358 PTPRKQ15262 1439 aa18.24■□□□□ 0.51
HMBOX1-203ENST00000397358 FAM9BQ8IZU0 186 aa18.24■□□□□ 0.51
HMBOX1-203ENST00000397358 DNMBPQ6XZF7 1577 aa18.24■□□□□ 0.51
HMBOX1-203ENST00000397358 EIF4G2P78344 907 aaKnown RBP eCLIP18.22■□□□□ 0.511e-6■■■□□ 15.8
HMBOX1-203ENST00000397358 NCOA2Q15596 1464 aa18.21■□□□□ 0.51
HMBOX1-203ENST00000397358 ZNF777Q9ULD5 760 aaPredicted RBP18.21■□□□□ 0.51
HMBOX1-203ENST00000397358 GAPVD1Q14C86 1478 aa18.2■□□□□ 0.5
HMBOX1-203ENST00000397358 UACAQ9BZF9 1416 aa18.19■□□□□ 0.5
HMBOX1-203ENST00000397358 EFCAB5A4FU69 1503 aa18.19■□□□□ 0.5
HMBOX1-203ENST00000397358 MYOM3Q5VTT5 1437 aa18.18■□□□□ 0.5
HMBOX1-203ENST00000397358 MPHOSPH9Q99550 1183 aa18.18■□□□□ 0.5
HMBOX1-203ENST00000397358 FBLN2P98095 1184 aa18.18■□□□□ 0.5
HMBOX1-203ENST00000397358 PRDM2Q13029 1718 aa18.17■□□□□ 0.5
HMBOX1-203ENST00000397358 L3MBTL2Q969R5 705 aa18.17■□□□□ 0.5
HMBOX1-203ENST00000397358 SENP3-EIF4A1A0A087X0R7 540 aa18.17■□□□□ 0.5
HMBOX1-203ENST00000397358 NAIPQ13075 1403 aa18.16■□□□□ 0.5
HMBOX1-203ENST00000397358 CFAP43Q8NDM7 1665 aa18.16■□□□□ 0.5
HMBOX1-203ENST00000397358 HFM1A2PYH4 1435 aa18.15■□□□□ 0.5
HMBOX1-203ENST00000397358 SLC4A1APQ9BWU0 796 aaKnown RBP18.15■□□□□ 0.5
HMBOX1-203ENST00000397358 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.15■□□□□ 0.5
HMBOX1-203ENST00000397358 URB2Q14146 1524 aaKnown RBP18.14■□□□□ 0.49
HMBOX1-203ENST00000397358 MRS2Q9HD23 443 aa18.13■□□□□ 0.49
HMBOX1-203ENST00000397358 RBM19Q9Y4C8 960 aaKnown RBP18.13■□□□□ 0.49
HMBOX1-203ENST00000397358 AQRO60306 1485 aaKnown RBP eCLIP18.13■□□□□ 0.492e-6■■■■□ 20.6
HMBOX1-203ENST00000397358 PDS5BQ9NTI5 1447 aa18.13■□□□□ 0.49
HMBOX1-203ENST00000397358 ANP32EQ9BTT0 268 aa18.12■□□□□ 0.49
HMBOX1-203ENST00000397358 WASHC2AQ641Q2 1341 aa18.12■□□□□ 0.49
HMBOX1-203ENST00000397358 ZNF644Q9H582 1327 aaPredicted RBP18.09■□□□□ 0.49
HMBOX1-203ENST00000397358 SNAPC4Q5SXM2 1469 aa18.09■□□□□ 0.49
HMBOX1-203ENST00000397358 CDK11AQ9UQ88 783 aaPredicted RBP18.09■□□□□ 0.49
HMBOX1-203ENST00000397358 CCDC184Q52MB2 194 aa18.08■□□□□ 0.49
HMBOX1-203ENST00000397358 CUL7Q14999 1698 aa18.07■□□□□ 0.48
HMBOX1-203ENST00000397358 ERICH6Q7L0X2 663 aa18.07■□□□□ 0.48
HMBOX1-203ENST00000397358 PTPN23Q9H3S7 1636 aa18.06■□□□□ 0.48
HMBOX1-203ENST00000397358 C11orf95C9JLR9 678 aaPredicted RBP18.03■□□□□ 0.48
HMBOX1-203ENST00000397358 CTTNBP2Q8WZ74 1663 aa18.02■□□□□ 0.48
HMBOX1-203ENST00000397358 GRIN2BQ13224 1484 aa18.02■□□□□ 0.47
HMBOX1-203ENST00000397358 CFDP1Q9UEE9 299 aaPredicted RBP18.01■□□□□ 0.47
HMBOX1-203ENST00000397358 NBPF8Q3BBV2 869 aa18■□□□□ 0.47
HMBOX1-203ENST00000397358 CDK13Q14004 1512 aaKnown RBP18■□□□□ 0.47
HMBOX1-203ENST00000397358 SUPT6HQ7KZ85 1726 aaKnown RBP17.99■□□□□ 0.47
HMBOX1-203ENST00000397358 EHBP1L1Q8N3D4 1523 aa17.98■□□□□ 0.47
HMBOX1-203ENST00000397358 KDM2AQ9Y2K7 1162 aa17.98■□□□□ 0.47
HMBOX1-203ENST00000397358 PRKRIP1Q9H875 184 aaPredicted RBP17.97■□□□□ 0.47
HMBOX1-203ENST00000397358 B4GALNT3Q6L9W6 998 aa17.97■□□□□ 0.47
HMBOX1-203ENST00000397358 CHMP7Q8WUX9 453 aaPredicted RBP17.96■□□□□ 0.47
HMBOX1-203ENST00000397358 EPRSP07814 1512 aaKnown RBP17.94■□□□□ 0.46
HMBOX1-203ENST00000397358 MAGI3Q5TCQ9 1506 aa17.94■□□□□ 0.46
HMBOX1-203ENST00000397358 LAMC3Q9Y6N6 1575 aa17.93■□□□□ 0.46
HMBOX1-203ENST00000397358 CCDC7Q96M83 1385 aa17.92■□□□□ 0.46
HMBOX1-203ENST00000397358 PKD2Q13563 968 aa17.91■□□□□ 0.46
HMBOX1-203ENST00000397358 UGGT2Q9NYU1 1516 aa17.91■□□□□ 0.46
HMBOX1-203ENST00000397358 SALL2Q9Y467 1007 aaPredicted RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms