RNA–Protein interactions for RNA: ENST00000397103.5

FGFR1-207, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 5 BASIC

Gene FGFR1, Length 2,953 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-207ENST00000397103 IL27Q8NEV9 243 aa17.65■□□□□ 0.42
FGFR1-207ENST00000397103 CCDC136Q96JN2 1154 aa17.65■□□□□ 0.42
FGFR1-207ENST00000397103 WASHC2AQ641Q2 1341 aa17.64■□□□□ 0.41
FGFR1-207ENST00000397103 SYNJ1O43426 1573 aa17.64■□□□□ 0.41
FGFR1-207ENST00000397103 RAPGEF2Q9Y4G8 1499 aa17.63■□□□□ 0.41
FGFR1-207ENST00000397103 C11orf95C9JLR9 678 aaPredicted RBP17.62■□□□□ 0.41
FGFR1-207ENST00000397103 CCNB3Q8WWL7 1395 aa17.61■□□□□ 0.41
FGFR1-207ENST00000397103 ARAP1Q96P48 1450 aa17.6■□□□□ 0.41
FGFR1-207ENST00000397103 RTL5Q5HYW3 569 aaPredicted RBP17.6■□□□□ 0.41
FGFR1-207ENST00000397103 RAB3GAP2Q9H2M9 1393 aa17.59■□□□□ 0.41
FGFR1-207ENST00000397103 IPO9Q96P70 1041 aaKnown RBP17.58■□□□□ 0.41
FGFR1-207ENST00000397103 SMARCA4P51532 1647 aa17.57■□□□□ 0.4
FGFR1-207ENST00000397103 IRX6P78412 446 aaPredicted RBP17.56■□□□□ 0.4
FGFR1-207ENST00000397103 KANK4Q5T7N3 995 aaPredicted RBP17.55■□□□□ 0.4
FGFR1-207ENST00000397103 BICRAQ9NZM4 1560 aa17.55■□□□□ 0.4
FGFR1-207ENST00000397103 WASHC2CQ9Y4E1 1318 aa17.55■□□□□ 0.4
FGFR1-207ENST00000397103 ERICH3Q5RHP9 1530 aa17.53■□□□□ 0.4
FGFR1-207ENST00000397103 HNRNPUQ00839 825 aaKnown RBP eCLIP17.52■□□□□ 0.44e-7■■□□□ 13.9
FGFR1-207ENST00000397103 USP35Q9P2H5 1018 aa17.52■□□□□ 0.4
FGFR1-207ENST00000397103 SETD5Q9C0A6 1442 aa17.5■□□□□ 0.39
FGFR1-207ENST00000397103 NCAPD3P42695 1498 aa17.5■□□□□ 0.39
FGFR1-207ENST00000397103 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.5■□□□□ 0.39
FGFR1-207ENST00000397103 ANP32AP39687 249 aaKnown RBP17.49■□□□□ 0.39
FGFR1-207ENST00000397103 ZBTB47Q9UFB7 747 aaPredicted RBP17.48■□□□□ 0.39
FGFR1-207ENST00000397103 B4GALNT3Q6L9W6 998 aa17.46■□□□□ 0.39
FGFR1-207ENST00000397103 RTN4Q9NQC3 1192 aaKnown RBP17.46■□□□□ 0.38
FGFR1-207ENST00000397103 PEG3Q9GZU2 1588 aa17.42■□□□□ 0.38
FGFR1-207ENST00000397103 SIN3AQ96ST3 1273 aa17.42■□□□□ 0.38
FGFR1-207ENST00000397103 MAP3K1Q13233 1512 aa17.41■□□□□ 0.38
FGFR1-207ENST00000397103 PRXQ9BXM0 1461 aa17.4■□□□□ 0.38
FGFR1-207ENST00000397103 ZBED9Q6R2W3 1325 aa17.37■□□□□ 0.37
FGFR1-207ENST00000397103 HIRIP3Q9BW71 556 aaPredicted RBP17.35■□□□□ 0.37
FGFR1-207ENST00000397103 FHAD1B1AJZ9 1412 aa17.34■□□□□ 0.37
FGFR1-207ENST00000397103 RNF123Q5XPI4 1314 aa17.34■□□□□ 0.37
FGFR1-207ENST00000397103 PKNOX2Q96KN3 472 aa17.33■□□□□ 0.36
FGFR1-207ENST00000397103 NCOA2Q15596 1464 aa17.32■□□□□ 0.36
FGFR1-207ENST00000397103 RSPH6AQ9H0K4 717 aa17.3■□□□□ 0.36
FGFR1-207ENST00000397103 TOP2BQ02880 1626 aa17.3■□□□□ 0.36
FGFR1-207ENST00000397103 PPM1GO15355 546 aaPredicted RBP17.3■□□□□ 0.36
FGFR1-207ENST00000397103 TIAM1Q13009 1591 aa17.29■□□□□ 0.36
FGFR1-207ENST00000397103 NEFMP07197 916 aa17.29■□□□□ 0.36
FGFR1-207ENST00000397103 PABPN1Q86U42 306 aaKnown RBP eCLIP17.28■□□□□ 0.364e-6■□□□□ 9.3
FGFR1-207ENST00000397103 SMG6Q86US8 1419 aaKnown RBP17.28■□□□□ 0.36
FGFR1-207ENST00000397103 BIVM-ERCC5R4GMW8 1640 aa17.26■□□□□ 0.35
FGFR1-207ENST00000397103 KDM5BQ9UGL1 1544 aa17.26■□□□□ 0.35
FGFR1-207ENST00000397103 ARHGAP35Q9NRY4 1499 aa17.26■□□□□ 0.35
FGFR1-207ENST00000397103 RANGAP1P46060 587 aaPredicted RBP17.24■□□□□ 0.35
FGFR1-207ENST00000397103 BRPF3Q9ULD4 1205 aa17.24■□□□□ 0.35
FGFR1-207ENST00000397103 GSE1Q14687 1217 aa17.23■□□□□ 0.35
FGFR1-207ENST00000397103 CNTLNQ9NXG0 1405 aa17.23■□□□□ 0.35
FGFR1-207ENST00000397103 EIF5BO60841 1220 aaKnown RBP17.22■□□□□ 0.35
FGFR1-207ENST00000397103 TONSLQ96HA7 1378 aa17.22■□□□□ 0.35
FGFR1-207ENST00000397103 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.2■□□□□ 0.344e-8■□□□□ 10.2
FGFR1-207ENST00000397103 LRRC9Q6ZRR7 1453 aa17.19■□□□□ 0.34
FGFR1-207ENST00000397103 CCDC184Q52MB2 194 aa17.19■□□□□ 0.34
FGFR1-207ENST00000397103 FAM43AQ8N2R8 423 aa17.19■□□□□ 0.34
FGFR1-207ENST00000397103 PHLDB1Q86UU1 1377 aa17.16■□□□□ 0.34
FGFR1-207ENST00000397103 CFAP43Q8NDM7 1665 aa17.16■□□□□ 0.34
FGFR1-207ENST00000397103 AKNAQ7Z591 1439 aa17.16■□□□□ 0.34
FGFR1-207ENST00000397103 TCERG1O14776 1098 aaKnown RBP17.16■□□□□ 0.34
FGFR1-207ENST00000397103 PRKRIP1Q9H875 184 aaPredicted RBP17.16■□□□□ 0.34
FGFR1-207ENST00000397103 LAS1LQ9Y4W2 734 aaKnown RBP17.15■□□□□ 0.34
FGFR1-207ENST00000397103 ABCA5Q8WWZ7 1642 aa17.13■□□□□ 0.33
FGFR1-207ENST00000397103 POLR1AO95602 1720 aaPredicted RBP17.13■□□□□ 0.33
FGFR1-207ENST00000397103 NUDCQ9Y266 331 aa17.13■□□□□ 0.33
FGFR1-207ENST00000397103 MS4A1P11836 297 aa17.12■□□□□ 0.33
FGFR1-207ENST00000397103 GLIPR1L2Q4G1C9 344 aa17.12■□□□□ 0.33
FGFR1-207ENST00000397103 BACH2Q9BYV9 841 aa17.1■□□□□ 0.33
FGFR1-207ENST00000397103 UACAQ9BZF9 1416 aa17.1■□□□□ 0.33
FGFR1-207ENST00000397103 PDE4AP27815 886 aa17.09■□□□□ 0.33
FGFR1-207ENST00000397103 FAM9BQ8IZU0 186 aa17.09■□□□□ 0.33
FGFR1-207ENST00000397103 NCOA1Q15788 1441 aa17.08■□□□□ 0.32
FGFR1-207ENST00000397103 MRS2Q9HD23 443 aa17.08■□□□□ 0.32
FGFR1-207ENST00000397103 FRAT1Q92837 279 aaPredicted RBP17.07■□□□□ 0.32
FGFR1-207ENST00000397103 HSPA5P11021 654 aaKnown RBP17.07■□□□□ 0.32
FGFR1-207ENST00000397103 DDRGK1Q96HY6 314 aa17.07■□□□□ 0.32
FGFR1-207ENST00000397103 NFKBIBQ15653 356 aa17.05■□□□□ 0.32
FGFR1-207ENST00000397103 CCDC18Q5T9S5 1454 aa17.04■□□□□ 0.32
FGFR1-207ENST00000397103 CCDC7Q96M83 1385 aa17.03■□□□□ 0.32
FGFR1-207ENST00000397103 NPM2Q86SE8 214 aaKnown RBP17.02■□□□□ 0.32
FGFR1-207ENST00000397103 PTPN23Q9H3S7 1636 aa17.01■□□□□ 0.31
FGFR1-207ENST00000397103 HFM1A2PYH4 1435 aa17.01■□□□□ 0.31
FGFR1-207ENST00000397103 FAM50AQ14320 339 aaKnown RBP17.01■□□□□ 0.31
FGFR1-207ENST00000397103 ZMYND15Q9H091 742 aa17■□□□□ 0.31
FGFR1-207ENST00000397103 EIF4G2P78344 907 aaKnown RBP eCLIP17■□□□□ 0.31
FGFR1-207ENST00000397103 KIF27Q86VH2 1401 aa16.98■□□□□ 0.31
FGFR1-207ENST00000397103 DCAF11Q8TEB1 546 aa16.95■□□□□ 0.3
FGFR1-207ENST00000397103 PCF11O94913 1555 aaKnown RBP16.91■□□□□ 0.3
FGFR1-207ENST00000397103 VSIG10Q8N0Z9 540 aa16.91■□□□□ 0.3
FGFR1-207ENST00000397103 HECW1Q76N89 1606 aa16.9■□□□□ 0.3
FGFR1-207ENST00000397103 RRP9O43818 475 aaKnown RBP16.9■□□□□ 0.3
FGFR1-207ENST00000397103 NAIPQ13075 1403 aa16.89■□□□□ 0.29
FGFR1-207ENST00000397103 RRP1P56182 461 aaKnown RBP16.89■□□□□ 0.29
FGFR1-207ENST00000397103 AQRO60306 1485 aaKnown RBP eCLIP16.89■□□□□ 0.29
FGFR1-207ENST00000397103 SPATA31E1Q6ZUB1 1445 aa16.88■□□□□ 0.29
FGFR1-207ENST00000397103 FGD6Q6ZV73 1430 aa16.88■□□□□ 0.29
FGFR1-207ENST00000397103 DHX29Q7Z478 1369 aaKnown RBP16.87■□□□□ 0.29
FGFR1-207ENST00000397103 PTPRKQ15262 1439 aa16.86■□□□□ 0.29
FGFR1-207ENST00000397103 RRAGDQ9NQL2 400 aaPredicted RBP16.86■□□□□ 0.29
FGFR1-207ENST00000397103 FMN1Q68DA7 1419 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms