RNA–Protein interactions for RNA: ENST00000396191.5

PDE1C-205, Transcript of phosphodiesterase 1C, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene PDE1C, Length 2,952 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-205ENST00000396191 SMARCA2P51531 1590 aa19.37■□□□□ 0.69
PDE1C-205ENST00000396191 KIF21BO75037 1637 aa19.36■□□□□ 0.69
PDE1C-205ENST00000396191 RTN4Q9NQC3 1192 aaKnown RBP19.35■□□□□ 0.69
PDE1C-205ENST00000396191 PAK3O75914 559 aaPredicted RBP19.34■□□□□ 0.69
PDE1C-205ENST00000396191 DNAJC5BQ9UF47 199 aa19.34■□□□□ 0.69
PDE1C-205ENST00000396191 TOP2AP11388 1531 aaKnown RBP19.33■□□□□ 0.69
PDE1C-205ENST00000396191 B4GALNT3Q6L9W6 998 aa19.32■□□□□ 0.68
PDE1C-205ENST00000396191 WDR97A6NE52 1622 aa19.32■□□□□ 0.68
PDE1C-205ENST00000396191 RAB3GAP2Q9H2M9 1393 aa19.31■□□□□ 0.68
PDE1C-205ENST00000396191 CCER2I3L3R5 266 aa19.27■□□□□ 0.68
PDE1C-205ENST00000396191 PODXL2Q9NZ53 605 aa19.26■□□□□ 0.67
PDE1C-205ENST00000396191 KLHL34Q8N239 644 aa19.26■□□□□ 0.67
PDE1C-205ENST00000396191 IL27Q8NEV9 243 aa19.24■□□□□ 0.67
PDE1C-205ENST00000396191 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.24■□□□□ 0.67
PDE1C-205ENST00000396191 CCNB3Q8WWL7 1395 aa19.24■□□□□ 0.67
PDE1C-205ENST00000396191 NOP58Q9Y2X3 529 aaKnown RBP19.23■□□□□ 0.67
PDE1C-205ENST00000396191 MAPKBP1O60336 1514 aa19.22■□□□□ 0.67
PDE1C-205ENST00000396191 SYNJ1O43426 1573 aa19.2■□□□□ 0.66
PDE1C-205ENST00000396191 MYT1LQ9UL68 1186 aa19.2■□□□□ 0.66
PDE1C-205ENST00000396191 FAM50AQ14320 339 aaKnown RBP19.19■□□□□ 0.66
PDE1C-205ENST00000396191 BAZ1BQ9UIG0 1483 aaKnown RBP19.17■□□□□ 0.66
PDE1C-205ENST00000396191 PPP4R2Q9NY27 417 aa19.17■□□□□ 0.66
PDE1C-205ENST00000396191 RRBP1Q9P2E9 1410 aaKnown RBP19.17■□□□□ 0.66
PDE1C-205ENST00000396191 ARAP1Q96P48 1450 aa19.14■□□□□ 0.65
PDE1C-205ENST00000396191 SENP3-EIF4A1A0A087X0R7 540 aa19.12■□□□□ 0.65
PDE1C-205ENST00000396191 CCDC184Q52MB2 194 aa19.12■□□□□ 0.65
PDE1C-205ENST00000396191 RTL5Q5HYW3 569 aaPredicted RBP19.11■□□□□ 0.65
PDE1C-205ENST00000396191 FAM9BQ8IZU0 186 aa19.1■□□□□ 0.65
PDE1C-205ENST00000396191 SMARCA4P51532 1647 aa19.1■□□□□ 0.65
PDE1C-205ENST00000396191 TIMELESSQ9UNS1 1208 aa19.09■□□□□ 0.65
PDE1C-205ENST00000396191 CNGB1Q14028 1251 aaPredicted RBP19.08■□□□□ 0.65
PDE1C-205ENST00000396191 UBE2Q2Q8WVN8 375 aa19.07■□□□□ 0.64
PDE1C-205ENST00000396191 ATP1B4Q9UN42 357 aaPredicted RBP19.07■□□□□ 0.64
PDE1C-205ENST00000396191 AEBP2Q6ZN18 517 aaPredicted RBP19.06■□□□□ 0.64
PDE1C-205ENST00000396191 SETD5Q9C0A6 1442 aa19.06■□□□□ 0.64
PDE1C-205ENST00000396191 CUX2O14529 1486 aa19.06■□□□□ 0.64
PDE1C-205ENST00000396191 NPM2Q86SE8 214 aaKnown RBP19.01■□□□□ 0.63
PDE1C-205ENST00000396191 ZBTB47Q9UFB7 747 aaPredicted RBP19■□□□□ 0.63
PDE1C-205ENST00000396191 ANP32AP39687 249 aaKnown RBP18.98■□□□□ 0.63
PDE1C-205ENST00000396191 LAS1LQ9Y4W2 734 aaKnown RBP18.98■□□□□ 0.63
PDE1C-205ENST00000396191 TONSLQ96HA7 1378 aa18.96■□□□□ 0.63
PDE1C-205ENST00000396191 IPO9Q96P70 1041 aaKnown RBP18.96■□□□□ 0.63
PDE1C-205ENST00000396191 ERICH6BQ5W0A0 696 aa18.94■□□□□ 0.62
PDE1C-205ENST00000396191 ARXQ96QS3 562 aa18.93■□□□□ 0.62
PDE1C-205ENST00000396191 P3H3Q8IVL6 736 aa18.92■□□□□ 0.62
PDE1C-205ENST00000396191 PHLDB1Q86UU1 1377 aa18.9■□□□□ 0.62
PDE1C-205ENST00000396191 MRS2Q9HD23 443 aa18.9■□□□□ 0.62
PDE1C-205ENST00000396191 WASHC2AQ641Q2 1341 aa18.88■□□□□ 0.61
PDE1C-205ENST00000396191 CC2D2AQ9P2K1 1620 aa18.88■□□□□ 0.61
PDE1C-205ENST00000396191 NEFMP07197 916 aa18.87■□□□□ 0.61
PDE1C-205ENST00000396191 ARHGAP35Q9NRY4 1499 aa18.85■□□□□ 0.61
PDE1C-205ENST00000396191 HSPA5P11021 654 aaKnown RBP18.85■□□□□ 0.61
PDE1C-205ENST00000396191 AKNAQ7Z591 1439 aa18.84■□□□□ 0.61
PDE1C-205ENST00000396191 PRXQ9BXM0 1461 aa18.83■□□□□ 0.61
PDE1C-205ENST00000396191 BRPF3Q9ULD4 1205 aa18.82■□□□□ 0.6
PDE1C-205ENST00000396191 PKNOX2Q96KN3 472 aa18.8■□□□□ 0.6
PDE1C-205ENST00000396191 C11orf95C9JLR9 678 aaPredicted RBP18.78■□□□□ 0.6
PDE1C-205ENST00000396191 PRKRIP1Q9H875 184 aaPredicted RBP18.76■□□□□ 0.59
PDE1C-205ENST00000396191 ZBED9Q6R2W3 1325 aa18.75■□□□□ 0.59
PDE1C-205ENST00000396191 POLR3GLQ9BT43 218 aa18.73■□□□□ 0.59
PDE1C-205ENST00000396191 ERICH3Q5RHP9 1530 aa18.73■□□□□ 0.59
PDE1C-205ENST00000396191 LRRC9Q6ZRR7 1453 aa18.69■□□□□ 0.58
PDE1C-205ENST00000396191 EIF4G2P78344 907 aaKnown RBP eCLIP18.68■□□□□ 0.58
PDE1C-205ENST00000396191 SKAP1Q86WV1 359 aa18.67■□□□□ 0.58
PDE1C-205ENST00000396191 TIAM1Q13009 1591 aa18.67■□□□□ 0.58
PDE1C-205ENST00000396191 TULP1O00294 542 aaPredicted RBP18.66■□□□□ 0.58
PDE1C-205ENST00000396191 TOP2BQ02880 1626 aa18.66■□□□□ 0.58
PDE1C-205ENST00000396191 SLC4A3P48751 1232 aa18.65■□□□□ 0.58
PDE1C-205ENST00000396191 FOXD1Q16676 465 aa18.63■□□□□ 0.57
PDE1C-205ENST00000396191 PDIA4P13667 645 aaKnown RBP18.62■□□□□ 0.57
PDE1C-205ENST00000396191 KIF27Q86VH2 1401 aa18.62■□□□□ 0.57
PDE1C-205ENST00000396191 CHIC2Q9UKJ5 165 aa18.62■□□□□ 0.57
PDE1C-205ENST00000396191 FHAD1B1AJZ9 1412 aa18.62■□□□□ 0.57
PDE1C-205ENST00000396191 CNTLNQ9NXG0 1405 aa18.62■□□□□ 0.57
PDE1C-205ENST00000396191 NUDCQ9Y266 331 aa18.61■□□□□ 0.57
PDE1C-205ENST00000396191 PDE4AP27815 886 aa18.6■□□□□ 0.57
PDE1C-205ENST00000396191 RRP7BPQ9NSQ0 103 aa18.6■□□□□ 0.57
PDE1C-205ENST00000396191 AQRO60306 1485 aaKnown RBP eCLIP18.6■□□□□ 0.57
PDE1C-205ENST00000396191 CCDC18Q5T9S5 1454 aa18.6■□□□□ 0.57
PDE1C-205ENST00000396191 EXOC6Q8TAG9 804 aa18.59■□□□□ 0.57
PDE1C-205ENST00000396191 ATAD2BQ9ULI0 1458 aa18.57■□□□□ 0.56
PDE1C-205ENST00000396191 WASHC2CQ9Y4E1 1318 aa18.57■□□□□ 0.56
PDE1C-205ENST00000396191 GSE1Q14687 1217 aa18.55■□□□□ 0.56
PDE1C-205ENST00000396191 FRAT1Q92837 279 aaPredicted RBP18.55■□□□□ 0.56
PDE1C-205ENST00000396191 CCDC7Q96M83 1385 aa18.55■□□□□ 0.56
PDE1C-205ENST00000396191 L3MBTL2Q969R5 705 aa18.55■□□□□ 0.56
PDE1C-205ENST00000396191 PTPRKQ15262 1439 aa18.55■□□□□ 0.56
PDE1C-205ENST00000396191 SMG6Q86US8 1419 aaKnown RBP18.53■□□□□ 0.56
PDE1C-205ENST00000396191 USP35Q9P2H5 1018 aa18.53■□□□□ 0.56
PDE1C-205ENST00000396191 PDE4CQ08493 712 aa18.51■□□□□ 0.55
PDE1C-205ENST00000396191 PPM1GO15355 546 aaPredicted RBP18.51■□□□□ 0.55
PDE1C-205ENST00000396191 KDM5BQ9UGL1 1544 aa18.51■□□□□ 0.55
PDE1C-205ENST00000396191 UACAQ9BZF9 1416 aa18.51■□□□□ 0.55
PDE1C-205ENST00000396191 NFKBIBQ15653 356 aa18.5■□□□□ 0.55
PDE1C-205ENST00000396191 BACH2Q9BYV9 841 aa18.5■□□□□ 0.55
PDE1C-205ENST00000396191 KIF7Q2M1P5 1343 aa18.5■□□□□ 0.55
PDE1C-205ENST00000396191 CUX1P39880 1505 aa18.48■□□□□ 0.55
PDE1C-205ENST00000396191 NBPF8Q3BBV2 869 aa18.48■□□□□ 0.55
PDE1C-205ENST00000396191 FHOD3Q2V2M9 1422 aa18.47■□□□□ 0.55
PDE1C-205ENST00000396191 RNF123Q5XPI4 1314 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms