RNA–Protein interactions for RNA: ENST00000395938.6

PMP22-203, Transcript of peripheral myelin protein 22, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMP22, Length 1,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMP22-203ENST00000395938 CLIP1P30622 1438 aa20.85■□□□□ 0.93
PMP22-203ENST00000395938 NUP160Q12769 1436 aa20.85■□□□□ 0.93
PMP22-203ENST00000395938 KIAA0586Q9BVV6 1533 aa20.84■□□□□ 0.93
PMP22-203ENST00000395938 CEP170Q5SW79 1584 aa20.8■□□□□ 0.92
PMP22-203ENST00000395938 CHD1O14646 1710 aa20.79■□□□□ 0.92
PMP22-203ENST00000395938 OSCARQ8IYS5 282 aa20.78■□□□□ 0.92
PMP22-203ENST00000395938 CTTNBP2Q8WZ74 1663 aa20.78■□□□□ 0.92
PMP22-203ENST00000395938 JPH4Q96JJ6 628 aa20.78■□□□□ 0.92
PMP22-203ENST00000395938 IQGAP2Q13576 1575 aa20.76■□□□□ 0.91
PMP22-203ENST00000395938 P3H3Q8IVL6 736 aa20.75■□□□□ 0.91
PMP22-203ENST00000395938 ARHGAP35Q9NRY4 1499 aa20.71■□□□□ 0.91
PMP22-203ENST00000395938 UGGT2Q9NYU1 1516 aa20.68■□□□□ 0.9
PMP22-203ENST00000395938 EFCAB5A4FU69 1503 aa20.67■□□□□ 0.9
PMP22-203ENST00000395938 CARMIL2Q6F5E8 1435 aa20.65■□□□□ 0.9
PMP22-203ENST00000395938 ARAP1Q96P48 1450 aa20.63■□□□□ 0.89
PMP22-203ENST00000395938 FHOD3Q2V2M9 1422 aa20.62■□□□□ 0.89
PMP22-203ENST00000395938 CLASP1Q7Z460 1538 aa20.62■□□□□ 0.89
PMP22-203ENST00000395938 PRG4Q92954 1404 aaPredicted RBP20.62■□□□□ 0.89
PMP22-203ENST00000395938 SAMD9Q5K651 1589 aa20.6■□□□□ 0.89
PMP22-203ENST00000395938 DISP1Q96F81 1524 aa20.6■□□□□ 0.89
PMP22-203ENST00000395938 VPS8Q8N3P4 1428 aa20.58■□□□□ 0.89
PMP22-203ENST00000395938 TTBK1Q5TCY1 1321 aaPredicted RBP20.58■□□□□ 0.88
PMP22-203ENST00000395938 FMN1Q68DA7 1419 aa20.55■□□□□ 0.88
PMP22-203ENST00000395938 KIAA0556O60303 1618 aa20.54■□□□□ 0.88
PMP22-203ENST00000395938 SHROOM2Q13796 1616 aa20.53■□□□□ 0.88
PMP22-203ENST00000395938 ATP1B4Q9UN42 357 aaPredicted RBP20.53■□□□□ 0.88
PMP22-203ENST00000395938 APLP2Q06481 763 aa20.52■□□□□ 0.88
PMP22-203ENST00000395938 PTPRGP23470 1445 aa20.48■□□□□ 0.87
PMP22-203ENST00000395938 CASKIN1Q8WXD9 1431 aa20.44■□□□□ 0.86
PMP22-203ENST00000395938 ERCC6L2Q5T890 1561 aa20.43■□□□□ 0.86
PMP22-203ENST00000395938 FYCO1Q9BQS8 1478 aa20.39■□□□□ 0.85
PMP22-203ENST00000395938 PPARGC1BQ86YN6 1023 aaKnown RBP20.37■□□□□ 0.85
PMP22-203ENST00000395938 PCF11O94913 1555 aaKnown RBP20.35■□□□□ 0.85
PMP22-203ENST00000395938 PLB1Q6P1J6 1458 aa20.35■□□□□ 0.85
PMP22-203ENST00000395938 ARID3CA6NKF2 412 aa20.33■□□□□ 0.85
PMP22-203ENST00000395938 UACAQ9BZF9 1416 aa20.33■□□□□ 0.84
PMP22-203ENST00000395938 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.32■□□□□ 0.84
PMP22-203ENST00000395938 HNRNPUL2Q1KMD3 747 aaKnown RBP20.32■□□□□ 0.84
PMP22-203ENST00000395938 RAPGEF6Q8TEU7 1601 aa20.3■□□□□ 0.84
PMP22-203ENST00000395938 ARHGEF11O15085 1522 aa20.3■□□□□ 0.84
PMP22-203ENST00000395938 HECW1Q76N89 1606 aa20.29■□□□□ 0.84
PMP22-203ENST00000395938 ABCA8O94911 1581 aa20.29■□□□□ 0.84
PMP22-203ENST00000395938 KANK4Q5T7N3 995 aaPredicted RBP20.28■□□□□ 0.84
PMP22-203ENST00000395938 MAP3K1Q13233 1512 aa20.28■□□□□ 0.84
PMP22-203ENST00000395938 NUP153P49790 1475 aaKnown RBP20.27■□□□□ 0.84
PMP22-203ENST00000395938 CDK11AQ9UQ88 783 aaPredicted RBP20.27■□□□□ 0.84
PMP22-203ENST00000395938 CCDC18Q5T9S5 1454 aa20.27■□□□□ 0.83
PMP22-203ENST00000395938 EPRSP07814 1512 aaKnown RBP20.26■□□□□ 0.83
PMP22-203ENST00000395938 CYB5RLQ6IPT4 315 aa20.24■□□□□ 0.83
PMP22-203ENST00000395938 TIAM1Q13009 1591 aa20.23■□□□□ 0.83
PMP22-203ENST00000395938 UHRF1BP1LA0JNW5 1464 aa20.22■□□□□ 0.83
PMP22-203ENST00000395938 ABCC2Q92887 1545 aa20.22■□□□□ 0.83
PMP22-203ENST00000395938 MTUS2Q5JR59 1369 aa20.21■□□□□ 0.83
PMP22-203ENST00000395938 PLEKHD1A6NEE1 506 aa20.2■□□□□ 0.82
PMP22-203ENST00000395938 ATP10BO94823 1461 aa20.2■□□□□ 0.82
PMP22-203ENST00000395938 CDK13Q14004 1512 aaKnown RBP20.2■□□□□ 0.82
PMP22-203ENST00000395938 NPM1P06748 294 aaKnown RBP eCLIP20.2■□□□□ 0.82
PMP22-203ENST00000395938 LRRC9Q6ZRR7 1453 aa20.19■□□□□ 0.82
PMP22-203ENST00000395938 RIMBP3CA6NJZ7 1639 aa20.19■□□□□ 0.82
PMP22-203ENST00000395938 RIMBP3BA6NNM3 1639 aa20.19■□□□□ 0.82
PMP22-203ENST00000395938 RIMBP3Q9UFD9 1639 aa20.19■□□□□ 0.82
PMP22-203ENST00000395938 CFAP43Q8NDM7 1665 aa20.14■□□□□ 0.82
PMP22-203ENST00000395938 LRRIQ1Q96JM4 1722 aa20.13■□□□□ 0.81
PMP22-203ENST00000395938 KDM5BQ9UGL1 1544 aa20.12■□□□□ 0.81
PMP22-203ENST00000395938 ADCY10Q96PN6 1610 aa20.1■□□□□ 0.81
PMP22-203ENST00000395938 DNAJC5Q9H3Z4 198 aa20.09■□□□□ 0.81
PMP22-203ENST00000395938 TRIM26Q12899 539 aaPredicted RBP20.09■□□□□ 0.81
PMP22-203ENST00000395938 TROQ12816 1431 aaPredicted RBP20.08■□□□□ 0.81
PMP22-203ENST00000395938 EHBP1L1Q8N3D4 1523 aa20.08■□□□□ 0.81
PMP22-203ENST00000395938 MAGI3Q5TCQ9 1506 aa20.07■□□□□ 0.8
PMP22-203ENST00000395938 KCNH8Q96L42 1107 aa20.04■□□□□ 0.8
PMP22-203ENST00000395938 ZCCHC11Q5TAX3 1644 aaKnown RBP20.04■□□□□ 0.8
PMP22-203ENST00000395938 NCOA2Q15596 1464 aa20.02■□□□□ 0.8
PMP22-203ENST00000395938 PHLDB1Q86UU1 1377 aa20■□□□□ 0.79
PMP22-203ENST00000395938 SUPT6HQ7KZ85 1726 aaKnown RBP19.98■□□□□ 0.79
PMP22-203ENST00000395938 ASXL2Q76L83 1435 aa19.98■□□□□ 0.79
PMP22-203ENST00000395938 CCNB3Q8WWL7 1395 aa19.97■□□□□ 0.79
PMP22-203ENST00000395938 PCGF6Q9BYE7 350 aa19.96■□□□□ 0.79
PMP22-203ENST00000395938 WDR7Q9Y4E6 1490 aa19.95■□□□□ 0.78
PMP22-203ENST00000395938 MYOM3Q5VTT5 1437 aa19.92■□□□□ 0.78
PMP22-203ENST00000395938 KIF14Q15058 1648 aa19.92■□□□□ 0.78
PMP22-203ENST00000395938 FAM50AQ14320 339 aaKnown RBP19.9■□□□□ 0.78
PMP22-203ENST00000395938 CFDP1Q9UEE9 299 aaPredicted RBP19.9■□□□□ 0.78
PMP22-203ENST00000395938 RRBP1Q9P2E9 1410 aaKnown RBP19.9■□□□□ 0.78
PMP22-203ENST00000395938 ABCC10Q5T3U5 1492 aa19.89■□□□□ 0.77
PMP22-203ENST00000395938 FGD6Q6ZV73 1430 aa19.88■□□□□ 0.77
PMP22-203ENST00000395938 GPATCH8Q9UKJ3 1502 aaKnown RBP19.87■□□□□ 0.77
PMP22-203ENST00000395938 MIA2Q96PC5 1412 aa19.87■□□□□ 0.77
PMP22-203ENST00000395938 MAPKBP1O60336 1514 aa19.87■□□□□ 0.77
PMP22-203ENST00000395938 ZNF777Q9ULD5 760 aaPredicted RBP19.86■□□□□ 0.77
PMP22-203ENST00000395938 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.85■□□□□ 0.77
PMP22-203ENST00000395938 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.81■□□□□ 0.76
PMP22-203ENST00000395938 ITGAEP38570 1179 aa19.81■□□□□ 0.76
PMP22-203ENST00000395938 FAM69CQ0P6D2 419 aa19.8■□□□□ 0.76
PMP22-203ENST00000395938 EFCAB2Q5VUJ9 269 aa19.8■□□□□ 0.76
PMP22-203ENST00000395938 PLCH2O75038 1416 aa19.8■□□□□ 0.76
PMP22-203ENST00000395938 ZNF644Q9H582 1327 aaPredicted RBP19.79■□□□□ 0.76
PMP22-203ENST00000395938 TTC37Q6PGP7 1564 aa19.78■□□□□ 0.76
PMP22-203ENST00000395938 ITSN2Q9NZM3 1697 aa19.76■□□□□ 0.75
PMP22-203ENST00000395938 TCOF1Q13428 1488 aaKnown RBP19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 1003.5 ms