RNA–Protein interactions for RNA: ENST00000395879.5

COA1-203, Transcript of cytochrome c oxidase assembly factor 1 homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COA1, Length 2,448 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COA1-203ENST00000395879 CCNB3Q8WWL7 1395 aa12.27□□□□□ -0.45
COA1-203ENST00000395879 SYNJ1O43426 1573 aa12.27□□□□□ -0.45
COA1-203ENST00000395879 PAK3O75914 559 aaPredicted RBP12.27□□□□□ -0.45
COA1-203ENST00000395879 PPP4R2Q9NY27 417 aa12.27□□□□□ -0.45
COA1-203ENST00000395879 ARAP1Q96P48 1450 aa12.26□□□□□ -0.45
COA1-203ENST00000395879 SMARCA4P51532 1647 aa12.26□□□□□ -0.45
COA1-203ENST00000395879 CCDC136Q96JN2 1154 aa12.26□□□□□ -0.45
COA1-203ENST00000395879 HIRIP3Q9BW71 556 aaPredicted RBP12.26□□□□□ -0.45
COA1-203ENST00000395879 HNRNPUQ00839 825 aaKnown RBP eCLIP12.24□□□□□ -0.45
COA1-203ENST00000395879 SIN3AQ96ST3 1273 aa12.23□□□□□ -0.45
COA1-203ENST00000395879 IL27Q8NEV9 243 aa12.22□□□□□ -0.45
COA1-203ENST00000395879 RTL5Q5HYW3 569 aaPredicted RBP12.19□□□□□ -0.46
COA1-203ENST00000395879 B4GALNT3Q6L9W6 998 aa12.19□□□□□ -0.46
COA1-203ENST00000395879 UBE2Q2Q8WVN8 375 aa12.19□□□□□ -0.46
COA1-203ENST00000395879 TIMELESSQ9UNS1 1208 aa12.18□□□□□ -0.46
COA1-203ENST00000395879 SETD5Q9C0A6 1442 aa12.17□□□□□ -0.46
COA1-203ENST00000395879 RTN4Q9NQC3 1192 aaKnown RBP12.17□□□□□ -0.46
COA1-203ENST00000395879 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.16□□□□□ -0.46
COA1-203ENST00000395879 IPO9Q96P70 1041 aaKnown RBP12.14□□□□□ -0.47
COA1-203ENST00000395879 ERICH3Q5RHP9 1530 aa12.12□□□□□ -0.47
COA1-203ENST00000395879 ANP32AP39687 249 aaKnown RBP12.12□□□□□ -0.47
COA1-203ENST00000395879 ZBTB47Q9UFB7 747 aaPredicted RBP12.11□□□□□ -0.47
COA1-203ENST00000395879 WASHC2AQ641Q2 1341 aa12.1□□□□□ -0.47
COA1-203ENST00000395879 PRXQ9BXM0 1461 aa12.09□□□□□ -0.47
COA1-203ENST00000395879 C11orf95C9JLR9 678 aaPredicted RBP12.03□□□□□ -0.48
COA1-203ENST00000395879 ARHGAP35Q9NRY4 1499 aa12.03□□□□□ -0.48
COA1-203ENST00000395879 TONSLQ96HA7 1378 aa12.03□□□□□ -0.48
COA1-203ENST00000395879 CCDC184Q52MB2 194 aa12.03□□□□□ -0.48
COA1-203ENST00000395879 ZBED9Q6R2W3 1325 aa12.02□□□□□ -0.49
COA1-203ENST00000395879 TOP2BQ02880 1626 aa12.02□□□□□ -0.49
COA1-203ENST00000395879 WASHC2CQ9Y4E1 1318 aa12.02□□□□□ -0.49
COA1-203ENST00000395879 TIAM1Q13009 1591 aa12.01□□□□□ -0.49
COA1-203ENST00000395879 FAM50AQ14320 339 aaKnown RBP12□□□□□ -0.49
COA1-203ENST00000395879 PHLDB1Q86UU1 1377 aa12□□□□□ -0.49
COA1-203ENST00000395879 NEFMP07197 916 aa12□□□□□ -0.49
COA1-203ENST00000395879 USP35Q9P2H5 1018 aa12□□□□□ -0.49
COA1-203ENST00000395879 NCAPD3P42695 1498 aa11.99□□□□□ -0.49
COA1-203ENST00000395879 FHAD1B1AJZ9 1412 aa11.99□□□□□ -0.49
COA1-203ENST00000395879 FAM9BQ8IZU0 186 aa11.99□□□□□ -0.49
COA1-203ENST00000395879 MAP3K1Q13233 1512 aa11.99□□□□□ -0.49
COA1-203ENST00000395879 PEG3Q9GZU2 1588 aa11.98□□□□□ -0.49
COA1-203ENST00000395879 LAS1LQ9Y4W2 734 aaKnown RBP11.97□□□□□ -0.49
COA1-203ENST00000395879 LRRC9Q6ZRR7 1453 aa11.97□□□□□ -0.49
COA1-203ENST00000395879 EIF5BO60841 1220 aaKnown RBP11.96□□□□□ -0.5
COA1-203ENST00000395879 BRPF3Q9ULD4 1205 aa11.96□□□□□ -0.5
COA1-203ENST00000395879 BIVM-ERCC5R4GMW8 1640 aa11.95□□□□□ -0.5
COA1-203ENST00000395879 AKNAQ7Z591 1439 aa11.95□□□□□ -0.5
COA1-203ENST00000395879 CNTLNQ9NXG0 1405 aa11.94□□□□□ -0.5
COA1-203ENST00000395879 NCOA2Q15596 1464 aa11.94□□□□□ -0.5
COA1-203ENST00000395879 MRS2Q9HD23 443 aa11.94□□□□□ -0.5
COA1-203ENST00000395879 SMG6Q86US8 1419 aaKnown RBP11.93□□□□□ -0.5
COA1-203ENST00000395879 NPM2Q86SE8 214 aaKnown RBP11.93□□□□□ -0.5
COA1-203ENST00000395879 PRKRIP1Q9H875 184 aaPredicted RBP11.93□□□□□ -0.5
COA1-203ENST00000395879 KDM5BQ9UGL1 1544 aa11.93□□□□□ -0.5
COA1-203ENST00000395879 RNF123Q5XPI4 1314 aa11.92□□□□□ -0.5
COA1-203ENST00000395879 HSPA5P11021 654 aaKnown RBP11.92□□□□□ -0.5
COA1-203ENST00000395879 PPM1GO15355 546 aaPredicted RBP11.91□□□□□ -0.5
COA1-203ENST00000395879 GSE1Q14687 1217 aa11.88□□□□□ -0.51
COA1-203ENST00000395879 NUDCQ9Y266 331 aa11.88□□□□□ -0.51
COA1-203ENST00000395879 UNC13AQ9UPW8 1703 aa11.88□□□□□ -0.51
COA1-203ENST00000395879 CCDC18Q5T9S5 1454 aa11.88□□□□□ -0.51
COA1-203ENST00000395879 KIF27Q86VH2 1401 aa11.87□□□□□ -0.51
COA1-203ENST00000395879 UACAQ9BZF9 1416 aa11.87□□□□□ -0.51
COA1-203ENST00000395879 CFAP43Q8NDM7 1665 aa11.86□□□□□ -0.51
COA1-203ENST00000395879 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.86□□□□□ -0.51
COA1-203ENST00000395879 EIF4G2P78344 907 aaKnown RBP eCLIP11.86□□□□□ -0.51
COA1-203ENST00000395879 PKNOX2Q96KN3 472 aa11.86□□□□□ -0.51
COA1-203ENST00000395879 TCERG1O14776 1098 aaKnown RBP11.85□□□□□ -0.51
COA1-203ENST00000395879 PDE4AP27815 886 aa11.85□□□□□ -0.51
COA1-203ENST00000395879 RSPH6AQ9H0K4 717 aa11.84□□□□□ -0.51
COA1-203ENST00000395879 CCDC7Q96M83 1385 aa11.84□□□□□ -0.51
COA1-203ENST00000395879 NCOA1Q15788 1441 aa11.84□□□□□ -0.51
COA1-203ENST00000395879 BACH2Q9BYV9 841 aa11.82□□□□□ -0.52
COA1-203ENST00000395879 FRAT1Q92837 279 aaPredicted RBP11.82□□□□□ -0.52
COA1-203ENST00000395879 HFM1A2PYH4 1435 aa11.81□□□□□ -0.52
COA1-203ENST00000395879 PTPN23Q9H3S7 1636 aa11.81□□□□□ -0.52
COA1-203ENST00000395879 NFKBIBQ15653 356 aa11.8□□□□□ -0.52
COA1-203ENST00000395879 AQRO60306 1485 aaKnown RBP eCLIP11.8□□□□□ -0.524e-6■□□□□ 10.5
COA1-203ENST00000395879 PCF11O94913 1555 aaKnown RBP11.8□□□□□ -0.52
COA1-203ENST00000395879 CUX1P39880 1505 aa11.79□□□□□ -0.52
COA1-203ENST00000395879 ATAD2BQ9ULI0 1458 aa11.79□□□□□ -0.52
COA1-203ENST00000395879 MS4A1P11836 297 aa11.79□□□□□ -0.52
COA1-203ENST00000395879 FAM43AQ8N2R8 423 aa11.78□□□□□ -0.52
COA1-203ENST00000395879 PTPRKQ15262 1439 aa11.78□□□□□ -0.52
COA1-203ENST00000395879 DDRGK1Q96HY6 314 aa11.78□□□□□ -0.52
COA1-203ENST00000395879 FGD6Q6ZV73 1430 aa11.77□□□□□ -0.53
COA1-203ENST00000395879 ATP1B4Q9UN42 357 aaPredicted RBP11.76□□□□□ -0.53
COA1-203ENST00000395879 NAIPQ13075 1403 aa11.76□□□□□ -0.53
COA1-203ENST00000395879 EXOC6Q8TAG9 804 aa11.76□□□□□ -0.53
COA1-203ENST00000395879 ABCA5Q8WWZ7 1642 aa11.75□□□□□ -0.53
COA1-203ENST00000395879 KIF7Q2M1P5 1343 aa11.74□□□□□ -0.53
COA1-203ENST00000395879 SENP3-EIF4A1A0A087X0R7 540 aa11.74□□□□□ -0.53
COA1-203ENST00000395879 RRP1P56182 461 aaKnown RBP11.74□□□□□ -0.53
COA1-203ENST00000395879 FMN1Q68DA7 1419 aa11.73□□□□□ -0.53
COA1-203ENST00000395879 DCAF11Q8TEB1 546 aa11.72□□□□□ -0.53
COA1-203ENST00000395879 POLR1AO95602 1720 aaPredicted RBP11.71□□□□□ -0.53
COA1-203ENST00000395879 SLC4A3P48751 1232 aa11.71□□□□□ -0.54
COA1-203ENST00000395879 GLIPR1L2Q4G1C9 344 aa11.71□□□□□ -0.54
COA1-203ENST00000395879 P3H3Q8IVL6 736 aa11.71□□□□□ -0.54
COA1-203ENST00000395879 DENND4BO75064 1496 aaPredicted RBP11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms