RNA–Protein interactions for RNA: ENST00000395841.6

RAE1-203, Transcript of ribonucleic acid export 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAE1, Length 2,639 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-203ENST00000395841 WDR97A6NE52 1622 aa16.81■□□□□ 0.28
RAE1-203ENST00000395841 FHAD1B1AJZ9 1412 aa16.81■□□□□ 0.28
RAE1-203ENST00000395841 CCNB3Q8WWL7 1395 aa16.79■□□□□ 0.28
RAE1-203ENST00000395841 GAPVD1Q14C86 1478 aa16.78■□□□□ 0.28
RAE1-203ENST00000395841 DIEXFQ68CQ4 756 aaKnown RBP16.78■□□□□ 0.28
RAE1-203ENST00000395841 EFCAB5A4FU69 1503 aa16.77■□□□□ 0.28
RAE1-203ENST00000395841 ZNF608Q9ULD9 1512 aaPredicted RBP16.77■□□□□ 0.28
RAE1-203ENST00000395841 CLSPNQ9HAW4 1339 aa16.76■□□□□ 0.27
RAE1-203ENST00000395841 TARBP1Q13395 1621 aaKnown RBP16.76■□□□□ 0.27
RAE1-203ENST00000395841 ABCA5Q8WWZ7 1642 aa16.75■□□□□ 0.27
RAE1-203ENST00000395841 ZNF316A6NFI3 1004 aaPredicted RBP16.75■□□□□ 0.27
RAE1-203ENST00000395841 LRRC9Q6ZRR7 1453 aa16.74■□□□□ 0.27
RAE1-203ENST00000395841 CTTNBP2Q8WZ74 1663 aa16.73■□□□□ 0.27
RAE1-203ENST00000395841 DHX57Q6P158 1386 aaKnown RBP16.72■□□□□ 0.27
RAE1-203ENST00000395841 PCF11O94913 1555 aaKnown RBP16.72■□□□□ 0.27
RAE1-203ENST00000395841 CFAP43Q8NDM7 1665 aa16.71■□□□□ 0.27
RAE1-203ENST00000395841 ATP1B4Q9UN42 357 aaPredicted RBP16.71■□□□□ 0.27
RAE1-203ENST00000395841 FHOD3Q2V2M9 1422 aa16.71■□□□□ 0.26
RAE1-203ENST00000395841 FYCO1Q9BQS8 1478 aa16.7■□□□□ 0.26
RAE1-203ENST00000395841 CASKIN1Q8WXD9 1431 aa16.68■□□□□ 0.26
RAE1-203ENST00000395841 WDR62O43379 1518 aa16.68■□□□□ 0.26
RAE1-203ENST00000395841 FMN1Q68DA7 1419 aa16.65■□□□□ 0.26
RAE1-203ENST00000395841 PHLDB1Q86UU1 1377 aa16.65■□□□□ 0.26
RAE1-203ENST00000395841 THOC2Q8NI27 1593 aaKnown RBP16.64■□□□□ 0.25
RAE1-203ENST00000395841 FBLN2P98095 1184 aa16.63■□□□□ 0.25
RAE1-203ENST00000395841 SAMD9Q5K651 1589 aa16.61■□□□□ 0.25
RAE1-203ENST00000395841 ITGAEP38570 1179 aa16.61■□□□□ 0.25
RAE1-203ENST00000395841 IFT140Q96RY7 1462 aa16.61■□□□□ 0.25
RAE1-203ENST00000395841 PBRM1Q86U86 1689 aa16.6■□□□□ 0.25
RAE1-203ENST00000395841 SNAPC4Q5SXM2 1469 aa16.59■□□□□ 0.25
RAE1-203ENST00000395841 RAB3GAP2Q9H2M9 1393 aa16.57■□□□□ 0.24
RAE1-203ENST00000395841 GRIN2BQ13224 1484 aa16.56■□□□□ 0.24
RAE1-203ENST00000395841 SETD5Q9C0A6 1442 aa16.55■□□□□ 0.24
RAE1-203ENST00000395841 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.55■□□□□ 0.24
RAE1-203ENST00000395841 EIF4G3O43432 1585 aaKnown RBP16.55■□□□□ 0.24
RAE1-203ENST00000395841 ARID3CA6NKF2 412 aa16.54■□□□□ 0.24
RAE1-203ENST00000395841 FAM50AQ14320 339 aaKnown RBP16.53■□□□□ 0.24
RAE1-203ENST00000395841 ADAMTS12P58397 1594 aa16.51■□□□□ 0.23
RAE1-203ENST00000395841 CHMP7Q8WUX9 453 aaPredicted RBP16.5■□□□□ 0.23
RAE1-203ENST00000395841 SCAF1Q9H7N4 1312 aaKnown RBP16.5■□□□□ 0.23
RAE1-203ENST00000395841 ACIN1Q9UKV3 1341 aaKnown RBP16.49■□□□□ 0.23
RAE1-203ENST00000395841 MTUS2Q5JR59 1369 aa16.49■□□□□ 0.23
RAE1-203ENST00000395841 MAPKBP1O60336 1514 aa16.48■□□□□ 0.23
RAE1-203ENST00000395841 FGD6Q6ZV73 1430 aa16.47■□□□□ 0.23
RAE1-203ENST00000395841 CENPBP07199 599 aaPredicted RBP16.47■□□□□ 0.23
RAE1-203ENST00000395841 IQGAP2Q13576 1575 aa16.46■□□□□ 0.22
RAE1-203ENST00000395841 LRRIQ1Q96JM4 1722 aa16.45■□□□□ 0.22
RAE1-203ENST00000395841 NEUROD1Q13562 356 aa16.44■□□□□ 0.22
RAE1-203ENST00000395841 EHBP1L1Q8N3D4 1523 aa16.43■□□□□ 0.22
RAE1-203ENST00000395841 MIER1Q8N108 512 aa16.42■□□□□ 0.22
RAE1-203ENST00000395841 CCDC18Q5T9S5 1454 aa16.42■□□□□ 0.22
RAE1-203ENST00000395841 NCOA2Q15596 1464 aa16.42■□□□□ 0.22
RAE1-203ENST00000395841 GRIN2AQ12879 1464 aa16.4■□□□□ 0.22
RAE1-203ENST00000395841 MYOM3Q5VTT5 1437 aa16.4■□□□□ 0.22
RAE1-203ENST00000395841 SUPT6HQ7KZ85 1726 aaKnown RBP16.4■□□□□ 0.22
RAE1-203ENST00000395841 HECW1Q76N89 1606 aa16.39■□□□□ 0.21
RAE1-203ENST00000395841 UGGT2Q9NYU1 1516 aa16.38■□□□□ 0.21
RAE1-203ENST00000395841 ARHGEF11O15085 1522 aa16.37■□□□□ 0.21
RAE1-203ENST00000395841 MAGI3Q5TCQ9 1506 aa16.35■□□□□ 0.21
RAE1-203ENST00000395841 CEP170Q5SW79 1584 aa16.34■□□□□ 0.21
RAE1-203ENST00000395841 HFM1A2PYH4 1435 aa16.34■□□□□ 0.21
RAE1-203ENST00000395841 EPRSP07814 1512 aaKnown RBP16.34■□□□□ 0.21
RAE1-203ENST00000395841 KIAA0586Q9BVV6 1533 aa16.34■□□□□ 0.21
RAE1-203ENST00000395841 SYNJ2O15056 1496 aa16.34■□□□□ 0.21
RAE1-203ENST00000395841 MAGI1Q96QZ7 1491 aaPredicted RBP16.33■□□□□ 0.21
RAE1-203ENST00000395841 PTPRKQ15262 1439 aa16.33■□□□□ 0.2
RAE1-203ENST00000395841 TIMELESSQ9UNS1 1208 aa16.32■□□□□ 0.2
RAE1-203ENST00000395841 PTPN23Q9H3S7 1636 aa16.31■□□□□ 0.2
RAE1-203ENST00000395841 JPH4Q96JJ6 628 aa16.3■□□□□ 0.2
RAE1-203ENST00000395841 TCOF1Q13428 1488 aaKnown RBP16.29■□□□□ 0.2
RAE1-203ENST00000395841 DISP1Q96F81 1524 aa16.29■□□□□ 0.2
RAE1-203ENST00000395841 SIN3AQ96ST3 1273 aa16.29■□□□□ 0.2
RAE1-203ENST00000395841 KIAA0556O60303 1618 aa16.28■□□□□ 0.2
RAE1-203ENST00000395841 NAIPQ13075 1403 aa16.28■□□□□ 0.2
RAE1-203ENST00000395841 CDK13Q14004 1512 aaKnown RBP16.27■□□□□ 0.2
RAE1-203ENST00000395841 YTHDC1Q96MU7 727 aaKnown RBP16.27■□□□□ 0.2
RAE1-203ENST00000395841 UACAQ9BZF9 1416 aa16.27■□□□□ 0.2
RAE1-203ENST00000395841 MIA2Q96PC5 1412 aa16.25■□□□□ 0.19
RAE1-203ENST00000395841 GTF3C3Q9Y5Q9 886 aa16.24■□□□□ 0.19
RAE1-203ENST00000395841 NUP160Q12769 1436 aa16.21■□□□□ 0.19
RAE1-203ENST00000395841 AKNAQ7Z591 1439 aa16.21■□□□□ 0.18
RAE1-203ENST00000395841 NUP153P49790 1475 aaKnown RBP16.2■□□□□ 0.18
RAE1-203ENST00000395841 PLB1Q6P1J6 1458 aa16.2■□□□□ 0.18
RAE1-203ENST00000395841 RAPGEF6Q8TEU7 1601 aa16.19■□□□□ 0.18
RAE1-203ENST00000395841 PPP1R15AO75807 674 aaPredicted RBP16.19■□□□□ 0.18
RAE1-203ENST00000395841 CHD1O14646 1710 aa16.18■□□□□ 0.18
RAE1-203ENST00000395841 GCC2Q8IWJ2 1684 aa16.17■□□□□ 0.18
RAE1-203ENST00000395841 TONSLQ96HA7 1378 aa16.15■□□□□ 0.18
RAE1-203ENST00000395841 CDK11AQ9UQ88 783 aaPredicted RBP16.15■□□□□ 0.18
RAE1-203ENST00000395841 PRG4Q92954 1404 aaPredicted RBP16.14■□□□□ 0.17
RAE1-203ENST00000395841 RRP7BPQ9NSQ0 103 aa16.14■□□□□ 0.17
RAE1-203ENST00000395841 CHIC2Q9UKJ5 165 aa16.14■□□□□ 0.17
RAE1-203ENST00000395841 CARMIL2Q6F5E8 1435 aa16.11■□□□□ 0.17
RAE1-203ENST00000395841 ERCC6L2Q5T890 1561 aa16.1■□□□□ 0.17
RAE1-203ENST00000395841 ROCK1Q13464 1354 aa16.1■□□□□ 0.17
RAE1-203ENST00000395841 DAPK1P53355 1430 aa16.09■□□□□ 0.17
RAE1-203ENST00000395841 TROQ12816 1431 aaPredicted RBP16.09■□□□□ 0.17
RAE1-203ENST00000395841 KDM6BO15054 1643 aa16.07■□□□□ 0.16
RAE1-203ENST00000395841 DNMT1P26358 1616 aaKnown RBP16.07■□□□□ 0.16
RAE1-203ENST00000395841 ZNF644Q9H582 1327 aaPredicted RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms