RNA–Protein interactions for RNA: ENST00000395840.6

RAE1-202, Transcript of ribonucleic acid export 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAE1, Length 2,602 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-202ENST00000395840 CARMIL1Q5VZK9 1371 aa14□□□□□ -0.17
RAE1-202ENST00000395840 DNAJC5Q9H3Z4 198 aa13.99□□□□□ -0.17
RAE1-202ENST00000395840 CSRNP3Q8WYN3 585 aa13.96□□□□□ -0.17
RAE1-202ENST00000395840 RUSC2Q8N2Y8 1516 aa13.96□□□□□ -0.18
RAE1-202ENST00000395840 RAPGEF2Q9Y4G8 1499 aa13.96□□□□□ -0.18
RAE1-202ENST00000395840 NUP160Q12769 1436 aa13.95□□□□□ -0.18
RAE1-202ENST00000395840 BCL11AQ9H165 835 aa13.95□□□□□ -0.18
RAE1-202ENST00000395840 CLASP1Q7Z460 1538 aa13.93□□□□□ -0.18
RAE1-202ENST00000395840 PRXQ9BXM0 1461 aa13.92□□□□□ -0.18
RAE1-202ENST00000395840 CENPBP07199 599 aaPredicted RBP13.9□□□□□ -0.18
RAE1-202ENST00000395840 CEP170Q5SW79 1584 aa13.9□□□□□ -0.18
RAE1-202ENST00000395840 KIAA0586Q9BVV6 1533 aa13.88□□□□□ -0.19
RAE1-202ENST00000395840 KIF21BO75037 1637 aa13.86□□□□□ -0.19
RAE1-202ENST00000395840 FAM9AQ8IZU1 332 aaPredicted RBP13.83□□□□□ -0.19
RAE1-202ENST00000395840 SHROOM2Q13796 1616 aa13.83□□□□□ -0.2
RAE1-202ENST00000395840 LOC105371045A0A1W2PR82 267 aa13.82□□□□□ -0.2
RAE1-202ENST00000395840 IQGAP2Q13576 1575 aa13.81□□□□□ -0.2
RAE1-202ENST00000395840 JPH4Q96JJ6 628 aa13.81□□□□□ -0.2
RAE1-202ENST00000395840 CTTNBP2Q8WZ74 1663 aa13.8□□□□□ -0.2
RAE1-202ENST00000395840 ARHGEF11O15085 1522 aa13.8□□□□□ -0.2
RAE1-202ENST00000395840 GOLGA3Q08378 1498 aa13.79□□□□□ -0.2
RAE1-202ENST00000395840 RIMBP3CA6NJZ7 1639 aa13.78□□□□□ -0.2
RAE1-202ENST00000395840 RIMBP3BA6NNM3 1639 aa13.78□□□□□ -0.2
RAE1-202ENST00000395840 RIMBP3Q9UFD9 1639 aa13.78□□□□□ -0.2
RAE1-202ENST00000395840 CARMIL2Q6F5E8 1435 aa13.77□□□□□ -0.21
RAE1-202ENST00000395840 PRKCSHP14314 528 aaPredicted RBP13.77□□□□□ -0.21
RAE1-202ENST00000395840 PRG4Q92954 1404 aaPredicted RBP13.76□□□□□ -0.21
RAE1-202ENST00000395840 UGGT2Q9NYU1 1516 aa13.75□□□□□ -0.21
RAE1-202ENST00000395840 UBTFP17480 764 aaKnown RBP13.71□□□□□ -0.21
RAE1-202ENST00000395840 ARAP1Q96P48 1450 aa13.68□□□□□ -0.22
RAE1-202ENST00000395840 TNIKQ9UKE5 1360 aa13.67□□□□□ -0.22
RAE1-202ENST00000395840 KIAA0556O60303 1618 aa13.66□□□□□ -0.22
RAE1-202ENST00000395840 DIEXFQ68CQ4 756 aaKnown RBP13.66□□□□□ -0.22
RAE1-202ENST00000395840 EFCAB5A4FU69 1503 aa13.66□□□□□ -0.22
RAE1-202ENST00000395840 DISP1Q96F81 1524 aa13.66□□□□□ -0.22
RAE1-202ENST00000395840 ERCC6L2Q5T890 1561 aa13.65□□□□□ -0.22
RAE1-202ENST00000395840 CYB5RLQ6IPT4 315 aa13.64□□□□□ -0.23
RAE1-202ENST00000395840 PTPRGP23470 1445 aa13.64□□□□□ -0.23
RAE1-202ENST00000395840 SAMD9Q5K651 1589 aa13.63□□□□□ -0.23
RAE1-202ENST00000395840 ANP32EQ9BTT0 268 aa13.62□□□□□ -0.23
RAE1-202ENST00000395840 UHRF1BP1LA0JNW5 1464 aa13.57□□□□□ -0.24
RAE1-202ENST00000395840 EHMT2Q96KQ7 1210 aa13.57□□□□□ -0.24
RAE1-202ENST00000395840 NPM1P06748 294 aaKnown RBP eCLIP13.56□□□□□ -0.24
RAE1-202ENST00000395840 UACAQ9BZF9 1416 aa13.55□□□□□ -0.24
RAE1-202ENST00000395840 FMN1Q68DA7 1419 aa13.53□□□□□ -0.24
RAE1-202ENST00000395840 ABCC2Q92887 1545 aa13.53□□□□□ -0.24
RAE1-202ENST00000395840 YTHDC1Q96MU7 727 aaKnown RBP13.52□□□□□ -0.25
RAE1-202ENST00000395840 CLIP1P30622 1438 aa13.52□□□□□ -0.25
RAE1-202ENST00000395840 ARHGAP35Q9NRY4 1499 aa13.52□□□□□ -0.25
RAE1-202ENST00000395840 RANGAP1P46060 587 aaPredicted RBP13.51□□□□□ -0.25
RAE1-202ENST00000395840 P3H3Q8IVL6 736 aa13.51□□□□□ -0.25
RAE1-202ENST00000395840 ABCA8O94911 1581 aa13.5□□□□□ -0.25
RAE1-202ENST00000395840 ADCY10Q96PN6 1610 aa13.5□□□□□ -0.25
RAE1-202ENST00000395840 FHOD3Q2V2M9 1422 aa13.49□□□□□ -0.25
RAE1-202ENST00000395840 CEP162Q5TB80 1403 aa13.47□□□□□ -0.25
RAE1-202ENST00000395840 RAPGEF6Q8TEU7 1601 aa13.47□□□□□ -0.25
RAE1-202ENST00000395840 KDM5BQ9UGL1 1544 aa13.47□□□□□ -0.25
RAE1-202ENST00000395840 PLB1Q6P1J6 1458 aa13.46□□□□□ -0.25
RAE1-202ENST00000395840 MAPKBP1O60336 1514 aa13.46□□□□□ -0.26
RAE1-202ENST00000395840 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.43□□□□□ -0.26
RAE1-202ENST00000395840 HECW1Q76N89 1606 aa13.42□□□□□ -0.26
RAE1-202ENST00000395840 ERICH6Q7L0X2 663 aa13.42□□□□□ -0.26
RAE1-202ENST00000395840 CCER1Q8TC90 406 aaPredicted RBP13.42□□□□□ -0.26
RAE1-202ENST00000395840 ZCCHC11Q5TAX3 1644 aaKnown RBP13.41□□□□□ -0.26
RAE1-202ENST00000395840 CASKIN1Q8WXD9 1431 aa13.41□□□□□ -0.26
RAE1-202ENST00000395840 FYCO1Q9BQS8 1478 aa13.39□□□□□ -0.27
RAE1-202ENST00000395840 NUP153P49790 1475 aaKnown RBP13.39□□□□□ -0.27
RAE1-202ENST00000395840 CCDC18Q5T9S5 1454 aa13.38□□□□□ -0.27
RAE1-202ENST00000395840 ATP10BO94823 1461 aa13.38□□□□□ -0.27
RAE1-202ENST00000395840 CDK11AQ9UQ88 783 aaPredicted RBP13.38□□□□□ -0.27
RAE1-202ENST00000395840 ASXL2Q76L83 1435 aa13.37□□□□□ -0.27
RAE1-202ENST00000395840 TSHZ2Q9NRE2 1034 aa13.36□□□□□ -0.27
RAE1-202ENST00000395840 ABCC10Q5T3U5 1492 aa13.36□□□□□ -0.27
RAE1-202ENST00000395840 WDR7Q9Y4E6 1490 aa13.36□□□□□ -0.27
RAE1-202ENST00000395840 HNRNPUL2Q1KMD3 747 aaKnown RBP13.35□□□□□ -0.27
RAE1-202ENST00000395840 TRHP20396 242 aaPredicted RBP13.34□□□□□ -0.27
RAE1-202ENST00000395840 ATP1B4Q9UN42 357 aaPredicted RBP13.34□□□□□ -0.27
RAE1-202ENST00000395840 EPRSP07814 1512 aaKnown RBP13.34□□□□□ -0.27
RAE1-202ENST00000395840 PLEKHD1A6NEE1 506 aa13.34□□□□□ -0.27
RAE1-202ENST00000395840 PCF11O94913 1555 aaKnown RBP13.33□□□□□ -0.27
RAE1-202ENST00000395840 VPS8Q8N3P4 1428 aa13.33□□□□□ -0.28
RAE1-202ENST00000395840 GLI2P10070 1586 aa13.33□□□□□ -0.28
RAE1-202ENST00000395840 DIP2BQ9P265 1576 aa13.31□□□□□ -0.28
RAE1-202ENST00000395840 FAM69CQ0P6D2 419 aa13.29□□□□□ -0.28
RAE1-202ENST00000395840 APLP2Q06481 763 aa13.28□□□□□ -0.28
RAE1-202ENST00000395840 SUPT16HQ9Y5B9 1047 aaKnown RBP13.28□□□□□ -0.28
RAE1-202ENST00000395840 KIF13AQ9H1H9 1805 aa13.27□□□□□ -0.28
RAE1-202ENST00000395840 CDK13Q14004 1512 aaKnown RBP13.27□□□□□ -0.28
RAE1-202ENST00000395840 ARID3CA6NKF2 412 aa13.27□□□□□ -0.29
RAE1-202ENST00000395840 MAP3K1Q13233 1512 aa13.27□□□□□ -0.29
RAE1-202ENST00000395840 ZNF316A6NFI3 1004 aaPredicted RBP13.26□□□□□ -0.29
RAE1-202ENST00000395840 MIER1Q8N108 512 aa13.26□□□□□ -0.29
RAE1-202ENST00000395840 CFAP43Q8NDM7 1665 aa13.25□□□□□ -0.29
RAE1-202ENST00000395840 TROQ12816 1431 aaPredicted RBP13.25□□□□□ -0.29
RAE1-202ENST00000395840 KCNH8Q96L42 1107 aa13.25□□□□□ -0.29
RAE1-202ENST00000395840 LRRIQ1Q96JM4 1722 aa13.24□□□□□ -0.29
RAE1-202ENST00000395840 MAP3K4Q9Y6R4 1608 aa13.24□□□□□ -0.29
RAE1-202ENST00000395840 TEX14Q8IWB6 1497 aa13.23□□□□□ -0.29
RAE1-202ENST00000395840 ABCA9Q8IUA7 1624 aa13.23□□□□□ -0.29
RAE1-202ENST00000395840 KIF14Q15058 1648 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms