RNA–Protein interactions for RNA: ENST00000395205.6

BBS4-202, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best) BASIC

Gene BBS4, Length 2,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-202ENST00000395205 SYNJ2O15056 1496 aa15.61■□□□□ 0.09
BBS4-202ENST00000395205 GRIN2AQ12879 1464 aa15.59■□□□□ 0.09
BBS4-202ENST00000395205 P3H3Q8IVL6 736 aa15.55■□□□□ 0.08
BBS4-202ENST00000395205 ARHGAP35Q9NRY4 1499 aa15.52■□□□□ 0.07
BBS4-202ENST00000395205 KIAA0586Q9BVV6 1533 aa15.5■□□□□ 0.07
BBS4-202ENST00000395205 CTTNBP2Q8WZ74 1663 aa15.5■□□□□ 0.07
BBS4-202ENST00000395205 ARAP1Q96P48 1450 aa15.48■□□□□ 0.07
BBS4-202ENST00000395205 NUP160Q12769 1436 aa15.47■□□□□ 0.07
BBS4-202ENST00000395205 VPS8Q8N3P4 1428 aa15.47■□□□□ 0.07
BBS4-202ENST00000395205 IQGAP2Q13576 1575 aa15.47■□□□□ 0.07
BBS4-202ENST00000395205 CEP170Q5SW79 1584 aa15.46■□□□□ 0.07
BBS4-202ENST00000395205 JPH4Q96JJ6 628 aa15.45■□□□□ 0.06
BBS4-202ENST00000395205 APLP2Q06481 763 aa15.44■□□□□ 0.06
BBS4-202ENST00000395205 PPARGC1BQ86YN6 1023 aaKnown RBP15.44■□□□□ 0.06
BBS4-202ENST00000395205 FHOD3Q2V2M9 1422 aa15.44■□□□□ 0.06
BBS4-202ENST00000395205 EFCAB5A4FU69 1503 aa15.44■□□□□ 0.06
BBS4-202ENST00000395205 ATP1B4Q9UN42 357 aaPredicted RBP15.41■□□□□ 0.06
BBS4-202ENST00000395205 UGGT2Q9NYU1 1516 aa15.4■□□□□ 0.06
BBS4-202ENST00000395205 CHD1O14646 1710 aa15.39■□□□□ 0.05
BBS4-202ENST00000395205 TTBK1Q5TCY1 1321 aaPredicted RBP15.39■□□□□ 0.05
BBS4-202ENST00000395205 SAMD9Q5K651 1589 aa15.37■□□□□ 0.05
BBS4-202ENST00000395205 FMN1Q68DA7 1419 aa15.36■□□□□ 0.05
BBS4-202ENST00000395205 CARMIL2Q6F5E8 1435 aa15.35■□□□□ 0.05
BBS4-202ENST00000395205 DISP1Q96F81 1524 aa15.34■□□□□ 0.05
BBS4-202ENST00000395205 OSCARQ8IYS5 282 aa15.34■□□□□ 0.05
BBS4-202ENST00000395205 PRG4Q92954 1404 aaPredicted RBP15.32■□□□□ 0.04
BBS4-202ENST00000395205 KIAA0556O60303 1618 aa15.3■□□□□ 0.04
BBS4-202ENST00000395205 CASKIN1Q8WXD9 1431 aa15.29■□□□□ 0.04
BBS4-202ENST00000395205 TRIM26Q12899 539 aaPredicted RBP15.28■□□□□ 0.04
BBS4-202ENST00000395205 KANK4Q5T7N3 995 aaPredicted RBP15.26■□□□□ 0.03
BBS4-202ENST00000395205 CLASP1Q7Z460 1538 aa15.26■□□□□ 0.03
BBS4-202ENST00000395205 FYCO1Q9BQS8 1478 aa15.26■□□□□ 0.03
BBS4-202ENST00000395205 PCF11O94913 1555 aaKnown RBP15.25■□□□□ 0.03
BBS4-202ENST00000395205 PCGF6Q9BYE7 350 aa15.25■□□□□ 0.03
BBS4-202ENST00000395205 PTPRGP23470 1445 aa15.23■□□□□ 0.03
BBS4-202ENST00000395205 ARID3CA6NKF2 412 aa15.23■□□□□ 0.03
BBS4-202ENST00000395205 SHROOM2Q13796 1616 aa15.21■□□□□ 0.03
BBS4-202ENST00000395205 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.19■□□□□ 0.02
BBS4-202ENST00000395205 HNRNPUL2Q1KMD3 747 aaKnown RBP15.19■□□□□ 0.02
BBS4-202ENST00000395205 MAP3K1Q13233 1512 aa15.19■□□□□ 0.02
BBS4-202ENST00000395205 PLB1Q6P1J6 1458 aa15.18■□□□□ 0.02
BBS4-202ENST00000395205 TIAM1Q13009 1591 aa15.18■□□□□ 0.02
BBS4-202ENST00000395205 ERCC6L2Q5T890 1561 aa15.17■□□□□ 0.02
BBS4-202ENST00000395205 LRRC9Q6ZRR7 1453 aa15.15■□□□□ 0.02
BBS4-202ENST00000395205 HECW1Q76N89 1606 aa15.15■□□□□ 0.02
BBS4-202ENST00000395205 MTUS2Q5JR59 1369 aa15.14■□□□□ 0.01
BBS4-202ENST00000395205 CCDC18Q5T9S5 1454 aa15.14■□□□□ 0.01
BBS4-202ENST00000395205 EPRSP07814 1512 aaKnown RBP15.14■□□□□ 0.01
BBS4-202ENST00000395205 RAPGEF6Q8TEU7 1601 aa15.13■□□□□ 0.01
BBS4-202ENST00000395205 NUP153P49790 1475 aaKnown RBP15.13■□□□□ 0.01
BBS4-202ENST00000395205 CDK11AQ9UQ88 783 aaPredicted RBP15.12■□□□□ 0.01
BBS4-202ENST00000395205 UACAQ9BZF9 1416 aa15.11■□□□□ 0.01
BBS4-202ENST00000395205 CDK13Q14004 1512 aaKnown RBP15.1■□□□□ 0.01
BBS4-202ENST00000395205 ABCA8O94911 1581 aa15.1■□□□□ 0.01
BBS4-202ENST00000395205 CFAP43Q8NDM7 1665 aa15.09■□□□□ 0.01
BBS4-202ENST00000395205 PLEKHD1A6NEE1 506 aa15.06■□□□□ 0
BBS4-202ENST00000395205 ATP10BO94823 1461 aa15.06■□□□□ 0
BBS4-202ENST00000395205 LRRIQ1Q96JM4 1722 aa15.06■□□□□ 0
BBS4-202ENST00000395205 PHLDB1Q86UU1 1377 aa15.03■□□□□ -0
BBS4-202ENST00000395205 MAGI3Q5TCQ9 1506 aa15.02■□□□□ -0
BBS4-202ENST00000395205 EHBP1L1Q8N3D4 1523 aa15.02■□□□□ -0
BBS4-202ENST00000395205 ABCC2Q92887 1545 aa15.02□□□□□ -0.01
BBS4-202ENST00000395205 UHRF1BP1LA0JNW5 1464 aa15□□□□□ -0.01
BBS4-202ENST00000395205 NCOA2Q15596 1464 aa15□□□□□ -0.01
BBS4-202ENST00000395205 TROQ12816 1431 aaPredicted RBP14.99□□□□□ -0.01
BBS4-202ENST00000395205 CCNB3Q8WWL7 1395 aa14.99□□□□□ -0.01
BBS4-202ENST00000395205 FAM50AQ14320 339 aaKnown RBP14.98□□□□□ -0.01
BBS4-202ENST00000395205 ARHGEF11O15085 1522 aa14.98□□□□□ -0.01
BBS4-202ENST00000395205 RRBP1Q9P2E9 1410 aaKnown RBP14.97□□□□□ -0.01
BBS4-202ENST00000395205 NPM1P06748 294 aaKnown RBP eCLIP14.97□□□□□ -0.01
BBS4-202ENST00000395205 CYB5RLQ6IPT4 315 aa14.97□□□□□ -0.01
BBS4-202ENST00000395205 SUPT6HQ7KZ85 1726 aaKnown RBP14.96□□□□□ -0.02
BBS4-202ENST00000395205 ITGAEP38570 1179 aa14.94□□□□□ -0.02
BBS4-202ENST00000395205 KCNH8Q96L42 1107 aa14.94□□□□□ -0.02
BBS4-202ENST00000395205 HRCP23327 699 aa14.94□□□□□ -0.02
BBS4-202ENST00000395205 KDM5BQ9UGL1 1544 aa14.94□□□□□ -0.02
BBS4-202ENST00000395205 MYOM3Q5VTT5 1437 aa14.93□□□□□ -0.02
BBS4-202ENST00000395205 FGD6Q6ZV73 1430 aa14.92□□□□□ -0.02
BBS4-202ENST00000395205 ADCY10Q96PN6 1610 aa14.91□□□□□ -0.02
BBS4-202ENST00000395205 CFDP1Q9UEE9 299 aaPredicted RBP14.89□□□□□ -0.03
BBS4-202ENST00000395205 RIMBP3CA6NJZ7 1639 aa14.89□□□□□ -0.03
BBS4-202ENST00000395205 RIMBP3BA6NNM3 1639 aa14.89□□□□□ -0.03
BBS4-202ENST00000395205 RIMBP3Q9UFD9 1639 aa14.89□□□□□ -0.03
BBS4-202ENST00000395205 ZCCHC11Q5TAX3 1644 aaKnown RBP14.88□□□□□ -0.03
BBS4-202ENST00000395205 ZNF777Q9ULD5 760 aaPredicted RBP14.86□□□□□ -0.03
BBS4-202ENST00000395205 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.86□□□□□ -0.03
BBS4-202ENST00000395205 MIA2Q96PC5 1412 aa14.86□□□□□ -0.03
BBS4-202ENST00000395205 KIF14Q15058 1648 aa14.86□□□□□ -0.03
BBS4-202ENST00000395205 GPATCH8Q9UKJ3 1502 aaKnown RBP14.85□□□□□ -0.03
BBS4-202ENST00000395205 ABCC10Q5T3U5 1492 aa14.84□□□□□ -0.03
BBS4-202ENST00000395205 ASXL2Q76L83 1435 aa14.83□□□□□ -0.03
BBS4-202ENST00000395205 ZNF644Q9H582 1327 aaPredicted RBP14.83□□□□□ -0.04
BBS4-202ENST00000395205 WDR7Q9Y4E6 1490 aa14.82□□□□□ -0.04
BBS4-202ENST00000395205 PTPN23Q9H3S7 1636 aa14.81□□□□□ -0.04
BBS4-202ENST00000395205 TCOF1Q13428 1488 aaKnown RBP14.8□□□□□ -0.04
BBS4-202ENST00000395205 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.79□□□□□ -0.04
BBS4-202ENST00000395205 CHIC2Q9UKJ5 165 aa14.76□□□□□ -0.05
BBS4-202ENST00000395205 EFCAB2Q5VUJ9 269 aa14.75□□□□□ -0.05
BBS4-202ENST00000395205 ITSN2Q9NZM3 1697 aa14.75□□□□□ -0.05
BBS4-202ENST00000395205 CAMSAP2Q08AD1 1489 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms