RNA–Protein interactions for RNA: ENST00000395134.3

PFDN6-205, Transcript of prefoldin subunit 6, humanhuman

TSL 2

Gene PFDN6, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-205ENST00000395134 U3KPZ7 1027 aaPredicted RBP15.84■□□□□ 0.13
PFDN6-205ENST00000395134 MKRN4PQ13434 485 aaPredicted RBP15.82■□□□□ 0.12
PFDN6-205ENST00000395134 THOC2Q8NI27 1593 aaKnown RBP15.81■□□□□ 0.12
PFDN6-205ENST00000395134 WIZO95785 1651 aa15.8■□□□□ 0.12
PFDN6-205ENST00000395134 LAMC3Q9Y6N6 1575 aa15.78■□□□□ 0.12
PFDN6-205ENST00000395134 HOMEZQ8IX15 550 aa15.77■□□□□ 0.12
PFDN6-205ENST00000395134 SPOCK2Q92563 424 aa15.77■□□□□ 0.12
PFDN6-205ENST00000395134 TMEM132AQ24JP5 1023 aa15.7■□□□□ 0.1
PFDN6-205ENST00000395134 RGL2O15211 777 aa15.69■□□□□ 0.1
PFDN6-205ENST00000395134 KLHL34Q8N239 644 aa15.69■□□□□ 0.1
PFDN6-205ENST00000395134 DCAF8L1A6NGE4 600 aa15.65■□□□□ 0.1
PFDN6-205ENST00000395134 PDS5BQ9NTI5 1447 aa15.64■□□□□ 0.09
PFDN6-205ENST00000395134 APLP2Q06481 763 aa15.6■□□□□ 0.09
PFDN6-205ENST00000395134 CADPSQ9ULU8 1353 aa15.6■□□□□ 0.09
PFDN6-205ENST00000395134 MRC2Q9UBG0 1479 aa15.57■□□□□ 0.08
PFDN6-205ENST00000395134 C14orf37Q86TY3 774 aa15.56■□□□□ 0.08
PFDN6-205ENST00000395134 CHGAP10645 457 aaKnown RBP15.54■□□□□ 0.08
PFDN6-205ENST00000395134 WDR62O43379 1518 aa15.53■□□□□ 0.08
PFDN6-205ENST00000395134 RSF1Q96T23 1441 aaPredicted RBP15.53■□□□□ 0.08
PFDN6-205ENST00000395134 TOP2AP11388 1531 aaKnown RBP15.53■□□□□ 0.08
PFDN6-205ENST00000395134 CEP164Q9UPV0 1460 aa15.52■□□□□ 0.07
PFDN6-205ENST00000395134 FANCD2Q9BXW9 1451 aa15.49■□□□□ 0.07
PFDN6-205ENST00000395134 PRDM2Q13029 1718 aa15.48■□□□□ 0.07
PFDN6-205ENST00000395134 CFTRP13569 1480 aa15.43■□□□□ 0.06
PFDN6-205ENST00000395134 URB2Q14146 1524 aaKnown RBP15.38■□□□□ 0.05
PFDN6-205ENST00000395134 STAG3Q9UJ98 1225 aa15.35■□□□□ 0.05
PFDN6-205ENST00000395134 CCDC88BA6NC98 1476 aa15.33■□□□□ 0.04
PFDN6-205ENST00000395134 HS6ST3Q8IZP7 471 aa15.32■□□□□ 0.04
PFDN6-205ENST00000395134 PLCD3Q8N3E9 789 aa15.32■□□□□ 0.04
PFDN6-205ENST00000395134 TRIM41Q8WV44 630 aa15.31■□□□□ 0.04
PFDN6-205ENST00000395134 CIZ1Q9ULV3 898 aaPredicted RBP15.26■□□□□ 0.03
PFDN6-205ENST00000395134 POLA2Q14181 598 aa15.22■□□□□ 0.03
PFDN6-205ENST00000395134 TOPBP1Q92547 1522 aa15.21■□□□□ 0.03
PFDN6-205ENST00000395134 ZNF608Q9ULD9 1512 aaPredicted RBP15.21■□□□□ 0.03
PFDN6-205ENST00000395134 MIER1Q8N108 512 aa15.18■□□□□ 0.02
PFDN6-205ENST00000395134 EIF4G3O43432 1585 aaKnown RBP15.17■□□□□ 0.02
PFDN6-205ENST00000395134 DNMBPQ6XZF7 1577 aa15.16■□□□□ 0.02
PFDN6-205ENST00000395134 IFT140Q96RY7 1462 aa15.16■□□□□ 0.02
PFDN6-205ENST00000395134 OSCARQ8IYS5 282 aa15.14■□□□□ 0.01
PFDN6-205ENST00000395134 CHD1O14646 1710 aa15.13■□□□□ 0.01
PFDN6-205ENST00000395134 SUPT5HO00267 1087 aaKnown RBP15.11■□□□□ 0.01
PFDN6-205ENST00000395134 GTPBP6O43824 516 aaPredicted RBP15.11■□□□□ 0.01
PFDN6-205ENST00000395134 TRHP20396 242 aaPredicted RBP15.11■□□□□ 0.01
PFDN6-205ENST00000395134 NKX1-1Q15270 411 aaPredicted RBP15.11■□□□□ 0.01
PFDN6-205ENST00000395134 RIMBP3CA6NJZ7 1639 aa15.1■□□□□ 0.01
PFDN6-205ENST00000395134 RIMBP3BA6NNM3 1639 aa15.1■□□□□ 0.01
PFDN6-205ENST00000395134 RIMBP3Q9UFD9 1639 aa15.1■□□□□ 0.01
PFDN6-205ENST00000395134 PODXL2Q9NZ53 605 aa15.1■□□□□ 0.01
PFDN6-205ENST00000395134 TARBP1Q13395 1621 aaKnown RBP15.1■□□□□ 0.01
PFDN6-205ENST00000395134 RANGAP1P46060 587 aaPredicted RBP15.09■□□□□ 0.01
PFDN6-205ENST00000395134 ABCC8Q09428 1581 aa15.07■□□□□ 0
PFDN6-205ENST00000395134 ZBTB12Q9Y330 459 aaPredicted RBP15.05■□□□□ -0
PFDN6-205ENST00000395134 AQRO60306 1485 aaKnown RBP eCLIP15.05■□□□□ -0
PFDN6-205ENST00000395134 POLA1P09884 1462 aaPredicted RBP15.05■□□□□ -0
PFDN6-205ENST00000395134 ZBTB47Q9UFB7 747 aaPredicted RBP15.04■□□□□ -0
PFDN6-205ENST00000395134 RAD54L2Q9Y4B4 1467 aa15.02■□□□□ -0
PFDN6-205ENST00000395134 BRPF1P55201 1214 aaPredicted RBP15.01□□□□□ -0.01
PFDN6-205ENST00000395134 RNF25Q96BH1 459 aaPredicted RBP15.01□□□□□ -0.01
PFDN6-205ENST00000395134 ARHGEF11O15085 1522 aa15□□□□□ -0.01
PFDN6-205ENST00000395134 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.98□□□□□ -0.01
PFDN6-205ENST00000395134 P3H3Q8IVL6 736 aa14.98□□□□□ -0.01
PFDN6-205ENST00000395134 CUX1P39880 1505 aa14.97□□□□□ -0.01
PFDN6-205ENST00000395134 FGD5Q6ZNL6 1462 aa14.97□□□□□ -0.01
PFDN6-205ENST00000395134 LMOD2Q6P5Q4 547 aa14.97□□□□□ -0.01
PFDN6-205ENST00000395134 ZNF692Q9BU19 519 aaPredicted RBP14.97□□□□□ -0.01
PFDN6-205ENST00000395134 SPINK5Q9NQ38 1064 aaPredicted RBP14.97□□□□□ -0.01
PFDN6-205ENST00000395134 PLEKHG5O94827 1062 aa14.96□□□□□ -0.01
PFDN6-205ENST00000395134 TDRD9Q8NDG6 1382 aaKnown RBP14.95□□□□□ -0.02
PFDN6-205ENST00000395134 SOGA1O94964 1423 aa14.94□□□□□ -0.02
PFDN6-205ENST00000395134 WDR97A6NE52 1622 aa14.93□□□□□ -0.02
PFDN6-205ENST00000395134 SNAPC4Q5SXM2 1469 aa14.92□□□□□ -0.02
PFDN6-205ENST00000395134 PBRM1Q86U86 1689 aa14.92□□□□□ -0.02
PFDN6-205ENST00000395134 RIOK3O14730 519 aaKnown RBP14.87□□□□□ -0.03
PFDN6-205ENST00000395134 GSE1Q14687 1217 aa14.87□□□□□ -0.03
PFDN6-205ENST00000395134 ARAP1Q96P48 1450 aa14.87□□□□□ -0.03
PFDN6-205ENST00000395134 CYB5RLQ6IPT4 315 aa14.86□□□□□ -0.03
PFDN6-205ENST00000395134 SSUH2Q9Y2M2 353 aa14.84□□□□□ -0.03
PFDN6-205ENST00000395134 CLASP1Q7Z460 1538 aa14.82□□□□□ -0.04
PFDN6-205ENST00000395134 STK25O00506 426 aa14.82□□□□□ -0.04
PFDN6-205ENST00000395134 NEUROD2Q15784 382 aa14.82□□□□□ -0.04
PFDN6-205ENST00000395134 RYDENQ9NUL5 291 aaKnown RBP14.82□□□□□ -0.04
PFDN6-205ENST00000395134 GRIN2BQ13224 1484 aa14.82□□□□□ -0.04
PFDN6-205ENST00000395134 MAGI1Q96QZ7 1491 aaPredicted RBP14.82□□□□□ -0.04
PFDN6-205ENST00000395134 SYNJ1O43426 1573 aa14.81□□□□□ -0.04
PFDN6-205ENST00000395134 CAPN15O75808 1086 aa14.81□□□□□ -0.04
PFDN6-205ENST00000395134 ABCA5Q8WWZ7 1642 aa14.81□□□□□ -0.04
PFDN6-205ENST00000395134 UBTFP17480 764 aaKnown RBP14.8□□□□□ -0.04
PFDN6-205ENST00000395134 SPDYE2BA6NHP3 402 aa14.79□□□□□ -0.04
PFDN6-205ENST00000395134 SPDYE6P0CI01 402 aa14.79□□□□□ -0.04
PFDN6-205ENST00000395134 SPDYE2Q495Y8 402 aa14.79□□□□□ -0.04
PFDN6-205ENST00000395134 CHMP7Q8WUX9 453 aaPredicted RBP14.79□□□□□ -0.04
PFDN6-205ENST00000395134 GAPVD1Q14C86 1478 aa14.78□□□□□ -0.04
PFDN6-205ENST00000395134 SYNJ2O15056 1496 aa14.77□□□□□ -0.04
PFDN6-205ENST00000395134 VGFO15240 615 aaPredicted RBP14.75□□□□□ -0.05
PFDN6-205ENST00000395134 KCNV2Q8TDN2 545 aa14.75□□□□□ -0.05
PFDN6-205ENST00000395134 ABCA10Q8WWZ4 1543 aa14.75□□□□□ -0.05
PFDN6-205ENST00000395134 BIVM-ERCC5R4GMW8 1640 aa14.74□□□□□ -0.05
PFDN6-205ENST00000395134 TRIM26Q12899 539 aaPredicted RBP14.73□□□□□ -0.05
PFDN6-205ENST00000395134 ZC3H15Q8WU90 426 aaKnown RBP14.72□□□□□ -0.05
PFDN6-205ENST00000395134 WDR70Q9NW82 654 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms