RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 PLCB2Q00722 1185 aa16.35■□□□□ 0.21
SIN3A-202ENST00000394947 WDR43Q15061 677 aaKnown RBP eCLIP16.35■□□□□ 0.21
SIN3A-202ENST00000394947 CHIC2Q9UKJ5 165 aa16.32■□□□□ 0.2
SIN3A-202ENST00000394947 MYH16Q9H6N6 1097 aa16.32■□□□□ 0.2
SIN3A-202ENST00000394947 ARID4BQ4LE39 1312 aaPredicted RBP16.31■□□□□ 0.2
SIN3A-202ENST00000394947 NAP1L5Q96NT1 182 aaPredicted RBP16.3■□□□□ 0.2
SIN3A-202ENST00000394947 TONSLQ96HA7 1378 aa16.27■□□□□ 0.19
SIN3A-202ENST00000394947 CLSTN1O94985 981 aa16.26■□□□□ 0.19
SIN3A-202ENST00000394947 LAS1LQ9Y4W2 734 aaKnown RBP16.25■□□□□ 0.19
SIN3A-202ENST00000394947 TNNT2P45379 298 aaPredicted RBP16.25■□□□□ 0.19
SIN3A-202ENST00000394947 ZRSR1Q15695 479 aaKnown RBP16.25■□□□□ 0.19
SIN3A-202ENST00000394947 ARID3AQ99856 593 aa16.24■□□□□ 0.19
SIN3A-202ENST00000394947 MRS2Q9HD23 443 aa16.23■□□□□ 0.19
SIN3A-202ENST00000394947 PPM1GO15355 546 aaPredicted RBP16.21■□□□□ 0.19
SIN3A-202ENST00000394947 NAP1L2Q9ULW6 460 aaPredicted RBP16.21■□□□□ 0.19
SIN3A-202ENST00000394947 HAP1P54257 671 aaPredicted RBP16.18■□□□□ 0.18
SIN3A-202ENST00000394947 NPHP1O15259 732 aa16.16■□□□□ 0.18
SIN3A-202ENST00000394947 SPRYD3Q8NCJ5 442 aa16.14■□□□□ 0.17
SIN3A-202ENST00000394947 BECN1Q14457 450 aa16.14■□□□□ 0.17
SIN3A-202ENST00000394947 ERICH6BQ5W0A0 696 aa16.13■□□□□ 0.17
SIN3A-202ENST00000394947 ANO8Q9HCE9 1232 aaPredicted RBP16.13■□□□□ 0.17
SIN3A-202ENST00000394947 NEUROD2Q15784 382 aa16.13■□□□□ 0.17
SIN3A-202ENST00000394947 GOLGA6L22H0YM25 854 aa16.12■□□□□ 0.17
SIN3A-202ENST00000394947 PDE4CQ08493 712 aa16.11■□□□□ 0.17
SIN3A-202ENST00000394947 LMOD2Q6P5Q4 547 aa16.08■□□□□ 0.16
SIN3A-202ENST00000394947 MIER1Q8N108 512 aa16.07■□□□□ 0.16
SIN3A-202ENST00000394947 DDRGK1Q96HY6 314 aa16.06■□□□□ 0.16
SIN3A-202ENST00000394947 RGS3P49796 1198 aa16.06■□□□□ 0.16
SIN3A-202ENST00000394947 ISY1Q9ULR0 285 aaKnown RBP16.05■□□□□ 0.16
SIN3A-202ENST00000394947 PRM3Q9NNZ6 103 aa16.04■□□□□ 0.16
SIN3A-202ENST00000394947 FTSJ3Q8IY81 847 aaKnown RBP16.02■□□□□ 0.16
SIN3A-202ENST00000394947 PPP1R15AO75807 674 aaPredicted RBP16.02■□□□□ 0.16
SIN3A-202ENST00000394947 CASC1Q6TDU7 716 aa16.02■□□□□ 0.15
SIN3A-202ENST00000394947 FGD1P98174 961 aa16.01■□□□□ 0.15
SIN3A-202ENST00000394947 RGL3Q3MIN7 710 aa16.01■□□□□ 0.15
SIN3A-202ENST00000394947 NPM1P06748 294 aaKnown RBP eCLIP16.01■□□□□ 0.15
SIN3A-202ENST00000394947 FRAT1Q92837 279 aaPredicted RBP16■□□□□ 0.15
SIN3A-202ENST00000394947 HSP90AB1P08238 724 aaKnown RBP15.99■□□□□ 0.15
SIN3A-202ENST00000394947 OS9Q13438 667 aaPredicted RBP15.99■□□□□ 0.15
SIN3A-202ENST00000394947 SUPT16HQ9Y5B9 1047 aaKnown RBP15.97■□□□□ 0.15
SIN3A-202ENST00000394947 DRC7Q8IY82 874 aa15.97■□□□□ 0.15
SIN3A-202ENST00000394947 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.96■□□□□ 0.15
SIN3A-202ENST00000394947 FBXO3Q9UK99 471 aa15.96■□□□□ 0.15
SIN3A-202ENST00000394947 KCNJ4P48050 445 aa15.96■□□□□ 0.14
SIN3A-202ENST00000394947 SOX12O15370 315 aa15.95■□□□□ 0.14
SIN3A-202ENST00000394947 ABCC9O60706 1549 aa15.94■□□□□ 0.14
SIN3A-202ENST00000394947 GOLGA2Q08379 1002 aa15.93■□□□□ 0.14
SIN3A-202ENST00000394947 RRP7BPQ9NSQ0 103 aa15.93■□□□□ 0.14
SIN3A-202ENST00000394947 GOLGA6L6A8MZA4 724 aa15.91■□□□□ 0.14
SIN3A-202ENST00000394947 KCNH8Q96L42 1107 aa15.9■□□□□ 0.14
SIN3A-202ENST00000394947 APBB1O00213 710 aa15.88■□□□□ 0.13
SIN3A-202ENST00000394947 ANP32EQ9BTT0 268 aa15.87■□□□□ 0.13
SIN3A-202ENST00000394947 CC2D1BQ5T0F9 858 aaKnown RBP15.86■□□□□ 0.13
SIN3A-202ENST00000394947 NOC3LQ8WTT2 800 aaKnown RBP15.86■□□□□ 0.13
SIN3A-202ENST00000394947 GOLGA6L4A6NEF3 574 aa15.85■□□□□ 0.13
SIN3A-202ENST00000394947 CSRNP3Q8WYN3 585 aa15.84■□□□□ 0.13
SIN3A-202ENST00000394947 GZF1Q9H116 711 aaPredicted RBP15.83■□□□□ 0.12
SIN3A-202ENST00000394947 MSNP26038 577 aaKnown RBP15.83■□□□□ 0.12
SIN3A-202ENST00000394947 B4GALNT3Q6L9W6 998 aa15.82■□□□□ 0.12
SIN3A-202ENST00000394947 U2SURPO15042 1029 aaKnown RBP15.82■□□□□ 0.12
SIN3A-202ENST00000394947 CHAF1AQ13111 956 aaPredicted RBP15.81■□□□□ 0.12
SIN3A-202ENST00000394947 NOP58Q9Y2X3 529 aaKnown RBP15.81■□□□□ 0.12
SIN3A-202ENST00000394947 PNNQ9H307 717 aaKnown RBP15.8■□□□□ 0.12
SIN3A-202ENST00000394947 GNL2Q13823 731 aaKnown RBP15.79■□□□□ 0.12
SIN3A-202ENST00000394947 TSPY4P0CV99 314 aa15.79■□□□□ 0.12
SIN3A-202ENST00000394947 TSPY10P0CW01 314 aa15.79■□□□□ 0.12
SIN3A-202ENST00000394947 MAPK8IP3Q9UPT6 1336 aa15.79■□□□□ 0.12
SIN3A-202ENST00000394947 CREBRFQ8IUR6 639 aa15.78■□□□□ 0.12
SIN3A-202ENST00000394947 EIF4G2P78344 907 aaKnown RBP eCLIP15.78■□□□□ 0.12
SIN3A-202ENST00000394947 CFAP53Q96M91 514 aa15.78■□□□□ 0.12
SIN3A-202ENST00000394947 ZNF330Q9Y3S2 320 aaPredicted RBP15.78■□□□□ 0.12
SIN3A-202ENST00000394947 KNSTRNQ9Y448 316 aa15.76■□□□□ 0.11
SIN3A-202ENST00000394947 WWC1Q8IX03 1113 aa15.75■□□□□ 0.11
SIN3A-202ENST00000394947 DEKP35659 375 aaKnown RBP15.74■□□□□ 0.11
SIN3A-202ENST00000394947 A0A0U1RQG5 324 aaPredicted RBP15.73■□□□□ 0.11
SIN3A-202ENST00000394947 NRDCO43847 1150 aa15.73■□□□□ 0.11
SIN3A-202ENST00000394947 HSCBQ8IWL3 235 aa15.73■□□□□ 0.11
SIN3A-202ENST00000394947 PATL2C9JE40 543 aaKnown RBP15.72■□□□□ 0.11
SIN3A-202ENST00000394947 HSP90B1P14625 803 aaKnown RBP15.72■□□□□ 0.11
SIN3A-202ENST00000394947 SAFB2Q14151 953 aaKnown RBP eCLIP15.71■□□□□ 0.11
SIN3A-202ENST00000394947 TNNT3P45378 269 aaPredicted RBP15.7■□□□□ 0.1
SIN3A-202ENST00000394947 KIAA2012Q0VF49 1180 aa15.7■□□□□ 0.1
SIN3A-202ENST00000394947 FOXD4L1Q9NU39 408 aa15.7■□□□□ 0.1
SIN3A-202ENST00000394947 POGKQ9P215 609 aa15.69■□□□□ 0.1
SIN3A-202ENST00000394947 NOL8Q76FK4 1167 aaKnown RBP15.68■□□□□ 0.1
SIN3A-202ENST00000394947 CARD11Q9BXL7 1154 aa15.65■□□□□ 0.1
SIN3A-202ENST00000394947 MTUS2Q5JR59 1369 aa15.65■□□□□ 0.1
SIN3A-202ENST00000394947 FOXD4L5Q5VV16 416 aaPredicted RBP15.64■□□□□ 0.09
SIN3A-202ENST00000394947 FOXD4L4Q8WXT5 416 aaPredicted RBP15.64■□□□□ 0.09
SIN3A-202ENST00000394947 SLKQ9H2G2 1235 aaPredicted RBP15.64■□□□□ 0.09
SIN3A-202ENST00000394947 MLECQ14165 292 aa15.62■□□□□ 0.09
SIN3A-202ENST00000394947 CHMP3Q9Y3E7 222 aa15.59■□□□□ 0.09
SIN3A-202ENST00000394947 CHMP7Q8WUX9 453 aaPredicted RBP15.59■□□□□ 0.09
SIN3A-202ENST00000394947 NUDCQ9Y266 331 aa15.59■□□□□ 0.09
SIN3A-202ENST00000394947 CCDC9Q9Y3X0 531 aaKnown RBP15.59■□□□□ 0.09
SIN3A-202ENST00000394947 MCCP23508 829 aa15.59■□□□□ 0.09
SIN3A-202ENST00000394947 VPS53Q5VIR6 699 aa15.58■□□□□ 0.09
SIN3A-202ENST00000394947 PPP4R2Q9NY27 417 aa15.58■□□□□ 0.08
SIN3A-202ENST00000394947 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.55■□□□□ 0.08
SIN3A-202ENST00000394947 PAK3O75914 559 aaPredicted RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms